Overview

cy2sabiork is an open source Cytoscape 2 plugin to access kinetic information from the SABIO-RK reaction kinetics database via the RESTful web service.

Latest release
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Installation instructions & source code
https://github.com/matthiaskoenig/cy2sabiork/
Support & Forum: https://groups.google.com/forum/#!forum/cysbml-cyfluxviz
Bug Tracker: https://github.com/matthiaskoenig/cy2sabiork/issues

This plugin has not been ported to Cytoscape 3 yet.

cy2sabiork was developed by Matthias König within the Virtual Liver Network. We thank the SABIO-RK team and the Virtual Liver Network (VLN) for their support.

                      

Screenshots

Figure 1 - Import dialog. Generation of reaction kinetic networks based on arbitrary SABIO-RK RESTful queries. Integration with cy2sbml provides access to annoted species and reaction information.