Model : liver_glucose_8_const_glyglc
CreatorMatthias, Koenig, Humboldt-University Berlin, Institute for Theoretical Biology, koenigmx@hu-berlin.de
Created: 2020-01-02 18:16
Modified: 2020-01-02 18:16
|
L3V1 fbc-V2 comp-V1 BQB_HAS_TAXON
9606 BQB_IS BTO:0000759; UBERON:0002107; FMA:7197; BTO:0000575; FMA:14515 BQB_IS_VERSION_OF PW:0000685; map00010; GO:0006006; R-HSA-70326 BQM_IS_DESCRIBED_BY 22761565 |
Koenig Human Glucose Metabolism
Description
This is a metabolism model of Human glucose metabolism in SBML format.
This model is based on the model described in the article:
König M., Bulik S., Holzhütter HG.
PLoS Comput Biol. 2012;8(6)
The content of this model has been carefully created in a manual research effort.
This file has been created by
Matthias Koenig.
Terms of use
Copyright © 2020 Matthias Koenig.
Redistribution and use of any part of this model, with or without modification, are permitted provided that the following conditions are met:
- Redistributions of this SBML file must retain the above copyright notice, this list of conditions and the following disclaimer.
- Redistributions in a different form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.
Ports [14] | name | referenced element | port ref | id ref | unit ref | metaid ref | sbo | cvterm |
---|---|---|---|---|---|---|---|---|
s_port s_port
s_port |
s_port | UnitDefinition: s |
s | |||||
min_port min_port
min_port |
min_port | UnitDefinition: min |
min | |||||
kg_port kg_port
kg_port |
kg_port | UnitDefinition: kg |
kg | |||||
m_port m_port
m_port |
m_port | UnitDefinition: m |
m | |||||
m2_port m2_port
m2_port |
m2_port | UnitDefinition: m2 |
m2 | |||||
m3_port m3_port
m3_port |
m3_port | UnitDefinition: m3 |
m3 | |||||
mmole_port mmole_port
mmole_port |
mmole_port | UnitDefinition: mmole |
mmole | |||||
mM_port mM_port
mM_port |
mM_port | UnitDefinition: mM |
mM | |||||
per_s_port per_s_port
per_s_port |
per_s_port | UnitDefinition: per_s |
per_s | |||||
per_min_port per_min_port
per_min_port |
per_min_port | UnitDefinition: per_min |
per_min | |||||
ext_port ext_port
ext_port |
ext_port | Compartment: ext |
ext | |||||
cyto_port cyto_port
cyto_port |
cyto_port | Compartment: cyto |
cyto | |||||
glc_ext_port glc_ext_port
glc_ext_port |
glc_ext_port | Species: glc_ext |
glc_ext | |||||
lac_ext_port lac_ext_port
lac_ext_port |
lac_ext_port | Species: lac_ext |
lac_ext |
FunctionDefinitions [2] | name | math | sbo | cvterm |
---|---|---|---|---|
max
max |
minimum of arguments | |||
min
min |
maximum of arguments |
UnitDefinitions [19] | name | units | sbo | cvterm |
---|---|---|---|---|
s
s |
||||
min
min |
||||
kg
kg |
||||
m
m |
||||
m2
m2 |
||||
m3
m3 |
||||
mmole
mmole |
||||
mM
mM |
||||
per_s
per_s |
||||
per_min
per_min |
||||
s_per_min
s_per_min |
||||
per_mM
per_mM |
||||
mM2
mM2 |
||||
pmol
pmol |
||||
pM
pM |
||||
mmole_per_min
mmole_per_min |
||||
mumole_per_mmole
mumole_per_mmole |
||||
mumole_per_mmole_kg
mumole_per_mmole_kg |
||||
mumol_per_min_kg
mumol_per_min_kg |
Compartments [5] | name | size | constant | spatial dimensions | units | derived units | sbo | cvterm |
---|---|---|---|---|---|---|---|---|
ext meta_ext
ext |
blood | 1.0 | F | 3 | litre | |||
cyto meta_cyto
cyto |
cytosol | F | 3 | litre | ||||
mito meta_mito
mito |
mitochondrion | F | 3 | litre | ||||
pm meta_pm
pm |
plasma membrane | 1.0 | T | 2 | m2 | |||
mm meta_mm
mm |
mitochondrial membrane | 1.0 | T | 2 | m2 |
Species [49] | name | compartment | hasOnlySubstanceUnits | boundaryCondition | constant | initialAmount | initialConcentration | conversionFactor | units | substanceUnits | derivedUnits | sbo | cvterm |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
atp meta_atp
atp |
ATPC10H12N5O13P3 (-4) |
cyto | F | T | F | 2.8 | mmole | mmole | |||||
adp meta_adp
adp |
ADPC10H12N5O10P2 (-3) |
cyto | F | T | F | 0.8 | mmole | mmole | |||||
amp meta_amp
amp |
AMPC10H12N5O7P (-2) |
cyto | F | T | F | 0.16 | mmole | mmole | |||||
utp meta_utp
utp |
UTPC9H11N2O15P3 (-4) |
cyto | F | F | F | 0.27 | mmole | mmole | |||||
udp meta_udp
udp |
UDPC9H11N2O12P2 (-3) |
cyto | F | F | F | 0.09 | mmole | mmole | |||||
gtp meta_gtp
gtp |
GTPC10H12N5O14P3 (-4) |
cyto | F | F | F | 0.29 | mmole | mmole | |||||
gdp meta_gdp
gdp |
GDPC10H12N5O11P2 (-3) |
cyto | F | F | F | 0.1 | mmole | mmole | |||||
nad meta_nad
nad |
NAD+C21H26N7O14P2 (-1) |
cyto | F | T | F | 1.22 | mmole | mmole | |||||
nadh meta_nadh
nadh |
NADHC21H27N7O14P2 (-2) |
cyto | F | T | F | 0.00056 | mmole | mmole | BQB_IS SBO:0000247; CHEBI:57540; BAWFJGJZGIEFAR-NNYOXOHSSA-M; CHEBI:57945; BOPGDPNILDQYTO-NNYOXOHSSA-L BQB_IS_VERSION_OF C00003; C00004 |
||||
phos meta_phos
phos |
phosphateHO4P (-2) |
cyto | F | T | F | 5.0 | mmole | mmole | |||||
pp meta_pp
pp |
pyrophosphateHO7P2 (-3) |
cyto | F | F | F | 0.008 | mmole | mmole | |||||
co2 meta_co2
co2 |
CO2CO2 |
cyto | F | T | F | 5.0 | mmole | mmole | |||||
h2o meta_h2o
h2o |
H2OH2O |
cyto | F | T | F | 0.0 | mmole | mmole | |||||
h meta_h
h |
H+H (1) |
cyto | F | T | F | 0.0 | mmole | mmole | |||||
glc1p meta_glc1p
glc1p |
glucose-1 phosphateC6H11O9P (-2) |
cyto | F | F | F | 0.012 | mmole | mmole | |||||
udpglc meta_udpglc
udpglc |
UDP-glucoseC15H22N2O17P2 (-2) |
cyto | F | F | F | 0.38 | mmole | mmole | BQB_IS SBO:0000247; CHEBI:58223; XCCTYIAWTASOJW-XVFCMESISA-K; CHEBI:58885; HSCJRCZFDFQWRP-JZMIEXBBSA-L BQB_IS_VERSION_OF C00015; C00029 |
||||
glyglc meta_glyglc
glyglc |
glycogenC6H12O6 |
cyto | F | T | F | 250.0 | mmole | mmole | |||||
glc meta_glc
glc |
glucoseC6H12O6 |
cyto | F | F | F | 5.0 | mmole | mmole | |||||
glc6p meta_glc6p
glc6p |
glucose-6 phosphateC6H11O9P (-2) |
cyto | F | F | F | 0.12 | mmole | mmole | BQB_IS SBO:0000247; CHEBI:4167; WQZGKKKJIJFFOK-GASJEMHNSA-N; C00031; CHEBI:61548; NBSCHQHZLSJFNQ-GASJEMHNSA-L BQB_IS_VERSION_OF C00668; CHEBI:14314 |
||||
fru6p meta_fru6p
fru6p |
fructose-6 phosphateC6H11O9P (-2) |
cyto | F | F | F | 0.05 | mmole | mmole | |||||
fru16bp meta_fru16bp
fru16bp |
fructose-16 bisphosphateC6H10O12P2 (-4) |
cyto | F | F | F | 0.02 | mmole | mmole | |||||
fru26bp meta_fru26bp
fru26bp |
fructose-26 bisphosphateC6H10O12P2 (-4) |
cyto | F | F | F | 0.004 | mmole | mmole | |||||
grap meta_grap
grap |
glyceraldehyde 3-phosphateC3H5O6P (-2) |
cyto | F | F | F | 0.1 | mmole | mmole | |||||
dhap meta_dhap
dhap |
dihydroxyacetone phosphateC3H5O6P (-2) |
cyto | F | F | F | 0.03 | mmole | mmole | |||||
bpg13 meta_bpg13
bpg13 |
13-bisphospho-glycerateC3H4O10P2 (-4) |
cyto | F | F | F | 0.3 | mmole | mmole | |||||
pg3 meta_pg3
pg3 |
3-phosphoglycerateC3H4O7P (-3) |
cyto | F | F | F | 0.27 | mmole | mmole | |||||
pg2 meta_pg2
pg2 |
2-phosphoglycerateC3H4O7P (-3) |
cyto | F | F | F | 0.03 | mmole | mmole | |||||
pep meta_pep
pep |
phosphoenolpyruvateC3H2O6P (-3) |
cyto | F | F | F | 0.15 | mmole | mmole | |||||
pyr meta_pyr
pyr |
pyruvateC3H3O3 (-1) |
cyto | F | F | F | 0.1 | mmole | mmole | |||||
oaa meta_oaa
oaa |
oxaloacetateC4H2O5 (-2) |
cyto | F | F | F | 0.01 | mmole | mmole | |||||
lac meta_lac
lac |
lactateC3H5O3 (-1) |
cyto | F | F | F | 0.5 | mmole | mmole | |||||
glc_ext meta_glc_ext
glc_ext |
glucoseC6H12O6 |
ext | F | T | F | 3.0 | mmole | mmole | |||||
lac_ext meta_lac_ext
lac_ext |
lactateC3H5O3 (-1) |
ext | F | T | F | 1.2 | mmole | mmole | |||||
co2_mito meta_co2_mito
co2_mito |
CO2CO2 |
mito | F | T | F | 5.0 | mmole | mmole | |||||
phos_mito meta_phos_mito
phos_mito |
phosphateHO4P (-2) |
mito | F | T | F | 5.0 | mmole | mmole | |||||
oaa_mito meta_oaa_mito
oaa_mito |
oxaloacetateC4H2O5 (-2) |
mito | F | F | F | 0.01 | mmole | mmole | |||||
pep_mito meta_pep_mito
pep_mito |
phosphoenolpyruvateC3H2O6P (-3) |
mito | F | F | F | 0.15 | mmole | mmole | |||||
acoa_mito meta_acoa_mito
acoa_mito |
acetyl-coenzyme AC23H34N7O17P3S (-4) |
mito | F | T | F | 0.04 | mmole | mmole | |||||
pyr_mito meta_pyr_mito
pyr_mito |
pyruvateC3H3O3 (-1) |
mito | F | F | F | 0.1 | mmole | mmole | |||||
cit_mito meta_cit_mito
cit_mito |
citrateC6H5O7 (-3) |
mito | F | T | F | 0.32 | mmole | mmole | |||||
atp_mito meta_atp_mito
atp_mito |
ATPC10H12N5O13P3 (-4) |
mito | F | T | F | 2.8 | mmole | mmole | |||||
adp_mito meta_adp_mito
adp_mito |
ADPC10H12N5O10P2 (-3) |
mito | F | T | F | 0.8 | mmole | mmole | |||||
gtp_mito meta_gtp_mito
gtp_mito |
GTPC10H12N5O14P3 (-4) |
mito | F | F | F | 0.29 | mmole | mmole | |||||
gdp_mito meta_gdp_mito
gdp_mito |
GDPC10H12N5O11P2 (-3) |
mito | F | F | F | 0.1 | mmole | mmole | |||||
coa_mito meta_coa_mito
coa_mito |
coenzyme AC21H32N7O16P3S (-4) |
mito | F | T | F | 0.055 | mmole | mmole | |||||
nadh_mito meta_nadh_mito
nadh_mito |
NADHC21H27N7O14P2 (-2) |
mito | F | T | F | 0.24 | mmole | mmole | BQB_IS SBO:0000247; CHEBI:57540; BAWFJGJZGIEFAR-NNYOXOHSSA-M; CHEBI:57945; BOPGDPNILDQYTO-NNYOXOHSSA-L BQB_IS_VERSION_OF C00003; C00004 |
||||
nad_mito meta_nad_mito
nad_mito |
NAD+C21H26N7O14P2 (-1) |
mito | F | T | F | 0.98 | mmole | mmole | |||||
h2o_mito meta_h2o_mito
h2o_mito |
H20H2O |
mito | F | T | F | 0.0 | mmole | mmole | |||||
h_mito meta_h_mito
h_mito |
H+H (1) |
mito | F | T | F | 0.0 | mmole | mmole |
Parameters [257] | name | constant | value | unit | derived unit | sbo | cvterm |
---|---|---|---|---|---|---|---|
scale
scale |
scaling factor for rates | T | 1.0 | dimensionless | None | ||
V_cyto
V_cyto |
cytosolic volume | T | 1.0 | litre | |||
f_mito
f_mito |
mitochondrial volume factor | T | 0.2 | dimensionless | None | ||
Vliver
Vliver |
liver volume | T | 1.5 | litre | |||
fliver
fliver |
parenchymal fraction liver | T | 0.583333333333334 | dimensionless | None | ||
bodyweight
bodyweight |
bodyweight | T | 70.0 | kg | |||
sec_per_min
sec_per_min |
time conversion | T | 60.0 | s_per_min | |||
mumole_per_mmole
mumole_per_mmole |
amount conversion | T | 1000.0 | mumole_per_mmole | |||
x_ins1
x_ins1 |
T | 818.9 | pM | ||||
x_ins2
x_ins2 |
T | 0.0 | pM | ||||
x_ins3
x_ins3 |
T | 8.6 | mM | ||||
x_ins4
x_ins4 |
T | 4.2 | dimensionless | None | |||
x_glu1
x_glu1 |
T | 190.0 | pM | ||||
x_glu2
x_glu2 |
T | 37.9 | pM | ||||
x_glu3
x_glu3 |
T | 3.01 | mM | ||||
x_glu4
x_glu4 |
T | 6.4 | dimensionless | None | |||
x_epi1
x_epi1 |
T | 6090.0 | pM | ||||
x_epi2
x_epi2 |
T | 100.0 | pM | ||||
x_epi3
x_epi3 |
T | 3.1 | mM | ||||
x_epi4
x_epi4 |
T | 8.4 | dimensionless | None | |||
K_val
K_val |
T | 0.1 | dimensionless | None | |||
epi_f
epi_f |
T | 0.8 | dimensionless | None | |||
V_mito
V_mito |
mitochondrial volume | F | m3 | ||||
flux_conversion
flux_conversion |
F | mumole_per_mmole_kg | |||||
f_gly
f_gly |
scaling factor glycolysis | F | dimensionless | None | |||
f_glyglc
f_glyglc |
scaling factor glycogen metabolism | F | dimensionless | None | |||
ins meta_ins
ins |
insulin | F | pM | ||||
ins_norm
ins_norm |
insulin normalized | F | pM | ||||
glu meta_glu
glu |
glucagon | F | pM | ||||
glu_norm
glu_norm |
glucagon normalized | F | pM | ||||
epi meta_epi
epi |
epinephrine | F | pM | ||||
epi_norm
epi_norm |
epinephrine normalized | F | pM | ||||
K_ins
K_ins |
F | pM | |||||
K_glu
K_glu |
F | pM | |||||
K_epi
K_epi |
F | pM | |||||
gamma
gamma |
phosphorylation state | F | dimensionless | None | |||
nadh_tot
nadh_tot |
NADH balance | F | mM | ||||
atp_tot
atp_tot |
ATP balance | F | mM | ||||
utp_tot
utp_tot |
UTP balance | F | mM | ||||
gtp_tot
gtp_tot |
GTP balance | F | mM | ||||
nadh_mito_tot
nadh_mito_tot |
NADH mito balance | F | mM | ||||
atp_mito_tot
atp_mito_tot |
ATP mito balance | F | mM | ||||
gtp_mito_tot
gtp_mito_tot |
GTP mito balance | F | mM | ||||
HGP
HGP |
hepatic glucose production/utilization | F | mumol_per_min_kg | ||||
GNG
GNG |
gluconeogenesis/glycolysis | F | mumol_per_min_kg | ||||
GLY
GLY |
glycogenolysis/glycogen synthesis | F | mumol_per_min_kg | ||||
GLUT2_keq meta_GLUT2_keq
GLUT2_keq |
T | 1.0 | dimensionless | None | |||
GLUT2_k_glc meta_GLUT2_k_glc
GLUT2_k_glc |
T | 42.0 | mM | ||||
GLUT2_Vmax meta_GLUT2_Vmax
GLUT2_Vmax |
T | 420.0 | mmole_per_min | ||||
GK_n_gkrp
GK_n_gkrp |
T | 2.0 | dimensionless | None | |||
GK_k_glc1 meta_GK_k_glc1
GK_k_glc1 |
T | 15.0 | mM | ||||
GK_k_fru6p meta_GK_k_fru6p
GK_k_fru6p |
T | 0.01 | mM | ||||
GK_b
GK_b |
T | 0.7 | dimensionless | None | |||
GK_n
GK_n |
T | 1.6 | dimensionless | None | |||
GK_k_glc meta_GK_k_glc
GK_k_glc |
T | 7.5 | mM | ||||
GK_k_atp meta_GK_k_atp
GK_k_atp |
T | 0.26 | mM | ||||
GK_Vmax meta_GK_Vmax
GK_Vmax |
T | 25.2 | mmole_per_min | ||||
GK_gc_free
GK_gc_free |
F | dimensionless | None | ||||
G6PASE_k_glc6p meta_G6PASE_k_glc6p
G6PASE_k_glc6p |
T | 2.0 | mM | ||||
G6PASE_Vmax meta_G6PASE_Vmax
G6PASE_Vmax |
T | 18.9 | mmole_per_min | ||||
GPI_keq meta_GPI_keq
GPI_keq |
T | 0.517060817492925 | dimensionless | None | |||
GPI_k_glc6p meta_GPI_k_glc6p
GPI_k_glc6p |
T | 0.182 | mM | ||||
GPI_k_fru6p meta_GPI_k_fru6p
GPI_k_fru6p |
T | 0.071 | mM | ||||
GPI_Vmax meta_GPI_Vmax
GPI_Vmax |
T | 420.0 | mmole_per_min | ||||
G16PI_keq meta_G16PI_keq
G16PI_keq |
T | 15.7175540821514 | dimensionless | None | |||
G16PI_k_glc6p meta_G16PI_k_glc6p
G16PI_k_glc6p |
T | 0.67 | mM | ||||
G16PI_k_glc1p meta_G16PI_k_glc1p
G16PI_k_glc1p |
T | 0.045 | mM | ||||
G16PI_Vmax meta_G16PI_Vmax
G16PI_Vmax |
T | 100.0 | mmole_per_min | ||||
UPGASE_keq meta_UPGASE_keq
UPGASE_keq |
T | 0.312237619153088 | dimensionless | None | |||
UPGASE_k_utp meta_UPGASE_k_utp
UPGASE_k_utp |
T | 0.563 | mM | ||||
UPGASE_k_glc1p meta_UPGASE_k_glc1p
UPGASE_k_glc1p |
T | 0.172 | mM | ||||
UPGASE_k_udpglc meta_UPGASE_k_udpglc
UPGASE_k_udpglc |
T | 0.049 | mM | ||||
UPGASE_k_pp meta_UPGASE_k_pp
UPGASE_k_pp |
T | 0.166 | mM | ||||
UPGASE_Vmax meta_UPGASE_Vmax
UPGASE_Vmax |
T | 80.0 | mmole_per_min | ||||
PPASE_k_pp meta_PPASE_k_pp
PPASE_k_pp |
T | 0.005 | mM | ||||
PPASE_Vmax meta_PPASE_Vmax
PPASE_Vmax |
T | 2.4 | mmole_per_min | ||||
GS_C
GS_C |
T | 500.0 | mM | ||||
GS_k1_max
GS_k1_max |
T | 0.2 | dimensionless | None | |||
GSn_k1
GSn_k1 |
T | 0.224 | mM2 | ||||
GSp_k1
GSp_k1 |
T | 3.003 | mM2 | ||||
GSn_k2
GSn_k2 |
T | 0.1504 | mM | ||||
GSp_k2
GSp_k2 |
T | 0.09029 | mM | ||||
GS_Vmax meta_GS_Vmax
GS_Vmax |
T | 13.2 | mmole_per_min | ||||
GS_fs
GS_fs |
F | dimensionless | None | ||||
GSn_k_udpglc meta_GSn_k_udpglc
GSn_k_udpglc |
F | mM | |||||
GSp_k_udpglc meta_GSp_k_udpglc
GSp_k_udpglc |
F | mM | |||||
GSn
GSn |
F | mmole_per_min | |||||
GSp
GSp |
F | mmole_per_min | |||||
GP_keq meta_GP_keq
GP_keq |
T | 0.211826505793075 | per_mM | ||||
GPn_k_glyglc meta_GPn_k_glyglc
GPn_k_glyglc |
T | 4.8 | mM | ||||
GPp_k_glyglc meta_GPp_k_glyglc
GPp_k_glyglc |
T | 2.7 | mM | ||||
GPn_k_glc1p meta_GPn_k_glc1p
GPn_k_glc1p |
T | 120.0 | mM | ||||
GPp_k_glc1p meta_GPp_k_glc1p
GPp_k_glc1p |
T | 2.0 | mM | ||||
GPn_k_phos meta_GPn_k_phos
GPn_k_phos |
T | 300.0 | mM | ||||
GPp_k_phos meta_GPp_k_phos
GPp_k_phos |
T | 5.0 | mM | ||||
GPp_ki_glc meta_GPp_ki_glc
GPp_ki_glc |
T | 5.0 | mM | ||||
GPn_ka_amp
GPn_ka_amp |
T | 1.0 | mM | ||||
GPn_base_amp
GPn_base_amp |
T | 0.03 | dimensionless | None | |||
GPn_max_amp
GPn_max_amp |
T | 0.3 | dimensionless | None | |||
GP_Vmax meta_GP_Vmax
GP_Vmax |
T | 6.8 | mmole_per_min | ||||
GP_fmax
GP_fmax |
F | dimensionless | None | ||||
GPn_Vmax meta_GPn_Vmax
GPn_Vmax |
F | mmole_per_min | |||||
GPn
GPn |
F | mmole_per_min | |||||
GPp_Vmax meta_GPp_Vmax
GPp_Vmax |
F | mmole_per_min | |||||
GPp
GPp |
F | mmole_per_min | |||||
NDKGTP_keq meta_NDKGTP_keq
NDKGTP_keq |
T | 1.0 | dimensionless | None | |||
NDKGTP_k_atp meta_NDKGTP_k_atp
NDKGTP_k_atp |
T | 1.33 | mM | ||||
NDKGTP_k_adp meta_NDKGTP_k_adp
NDKGTP_k_adp |
T | 0.042 | mM | ||||
NDKGTP_k_gtp meta_NDKGTP_k_gtp
NDKGTP_k_gtp |
T | 0.15 | mM | ||||
NDKGTP_k_gdp meta_NDKGTP_k_gdp
NDKGTP_k_gdp |
T | 0.031 | mM | ||||
NDKGTP_Vmax meta_NDKGTP_Vmax
NDKGTP_Vmax |
T | 0.0 | mmole_per_min | ||||
NDKUTP_keq meta_NDKUTP_keq
NDKUTP_keq |
T | 1.0 | dimensionless | None | |||
NDKUTP_k_atp meta_NDKUTP_k_atp
NDKUTP_k_atp |
T | 1.33 | mM | ||||
NDKUTP_k_adp meta_NDKUTP_k_adp
NDKUTP_k_adp |
T | 0.042 | mM | ||||
NDKUTP_k_utp meta_NDKUTP_k_utp
NDKUTP_k_utp |
T | 16.0 | mM | ||||
NDKUTP_k_udp meta_NDKUTP_k_udp
NDKUTP_k_udp |
T | 0.19 | mM | ||||
NDKUTP_Vmax meta_NDKUTP_Vmax
NDKUTP_Vmax |
T | 2940.0 | mmole_per_min | ||||
AK_keq meta_AK_keq
AK_keq |
T | 0.247390074904985 | dimensionless | None | |||
AK_k_atp meta_AK_k_atp
AK_k_atp |
T | 0.09 | mM | ||||
AK_k_amp meta_AK_k_amp
AK_k_amp |
T | 0.08 | mM | ||||
AK_k_adp meta_AK_k_adp
AK_k_adp |
T | 0.11 | mM | ||||
AK_Vmax meta_AK_Vmax
AK_Vmax |
T | 0.0 | mmole_per_min | ||||
PFK2n_n
PFK2n_n |
T | 1.3 | dimensionless | None | |||
PFK2p_n
PFK2p_n |
T | 2.1 | dimensionless | None | |||
PFK2n_k_fru6p meta_PFK2n_k_fru6p
PFK2n_k_fru6p |
T | 0.016 | mM | ||||
PFK2p_k_fru6p meta_PFK2p_k_fru6p
PFK2p_k_fru6p |
T | 0.05 | mM | ||||
PFK2n_k_atp meta_PFK2n_k_atp
PFK2n_k_atp |
T | 0.28 | mM | ||||
PFK2p_k_atp meta_PFK2p_k_atp
PFK2p_k_atp |
T | 0.65 | mM | ||||
PFK2_Vmax meta_PFK2_Vmax
PFK2_Vmax |
T | 0.0042 | mmole_per_min | ||||
PFK2n
PFK2n |
F | mmole_per_min | |||||
PFK2p
PFK2p |
F | mmole_per_min | |||||
FBP2n_k_fru26bp meta_FBP2n_k_fru26bp
FBP2n_k_fru26bp |
T | 0.01 | mM | ||||
FBP2p_k_fru26bp meta_FBP2p_k_fru26bp
FBP2p_k_fru26bp |
T | 0.0005 | mM | ||||
FBP2n_ki_fru6p meta_FBP2n_ki_fru6p
FBP2n_ki_fru6p |
T | 0.0035 | mM | ||||
FBP2p_ki_fru6p meta_FBP2p_ki_fru6p
FBP2p_ki_fru6p |
T | 0.01 | mM | ||||
FBP2_Vmax meta_FBP2_Vmax
FBP2_Vmax |
T | 0.126 | mmole_per_min | ||||
FBP2n
FBP2n |
F | mmole_per_min | |||||
FBP2p
FBP2p |
F | mmole_per_min | |||||
PFK1_k_atp meta_PFK1_k_atp
PFK1_k_atp |
T | 0.111 | mM | ||||
PFK1_k_fru6p meta_PFK1_k_fru6p
PFK1_k_fru6p |
T | 0.077 | mM | ||||
PFK1_ki_fru6p meta_PFK1_ki_fru6p
PFK1_ki_fru6p |
T | 0.012 | mM | ||||
PFK1_ka_fru26bp
PFK1_ka_fru26bp |
T | 0.001 | mM | ||||
PFK1_Vmax meta_PFK1_Vmax
PFK1_Vmax |
T | 7.182 | mmole_per_min | ||||
FBP1_ki_fru26bp meta_FBP1_ki_fru26bp
FBP1_ki_fru26bp |
T | 0.001 | mM | ||||
FBP1_k_fru16bp meta_FBP1_k_fru16bp
FBP1_k_fru16bp |
T | 0.0013 | mM | ||||
FBP1_Vmax meta_FBP1_Vmax
FBP1_Vmax |
T | 4.326 | mmole_per_min | ||||
ALD_keq meta_ALD_keq
ALD_keq |
T | 9.76298897362969e-05 | mM | ||||
ALD_k_fru16bp meta_ALD_k_fru16bp
ALD_k_fru16bp |
T | 0.0071 | mM | ||||
ALD_k_dhap meta_ALD_k_dhap
ALD_k_dhap |
T | 0.0364 | mM | ||||
ALD_k_grap meta_ALD_k_grap
ALD_k_grap |
T | 0.0071 | mM | ||||
ALD_ki1_grap
ALD_ki1_grap |
T | 0.0572 | mM | ||||
ALD_ki2_grap
ALD_ki2_grap |
T | 0.176 | mM | ||||
ALD_Vmax meta_ALD_Vmax
ALD_Vmax |
T | 420.0 | mmole_per_min | ||||
TPI_keq meta_TPI_keq
TPI_keq |
T | 0.054476985386756 | dimensionless | None | |||
TPI_k_dhap meta_TPI_k_dhap
TPI_k_dhap |
T | 0.59 | mM | ||||
TPI_k_grap meta_TPI_k_grap
TPI_k_grap |
T | 0.42 | mM | ||||
TPI_Vmax meta_TPI_Vmax
TPI_Vmax |
T | 420.0 | mmole_per_min | ||||
GAPDH_keq meta_GAPDH_keq
GAPDH_keq |
T | 0.086779866194594 | per_mM | ||||
GAPDH_k_nad meta_GAPDH_k_nad
GAPDH_k_nad |
T | 0.05 | mM | ||||
GAPDH_k_grap meta_GAPDH_k_grap
GAPDH_k_grap |
T | 0.005 | mM | ||||
GAPDH_k_phos meta_GAPDH_k_phos
GAPDH_k_phos |
T | 3.9 | mM | ||||
GAPDH_k_nadh meta_GAPDH_k_nadh
GAPDH_k_nadh |
T | 0.0083 | mM | ||||
GAPDH_k_bpg13 meta_GAPDH_k_bpg13
GAPDH_k_bpg13 |
T | 0.0035 | mM | ||||
GAPDH_Vmax meta_GAPDH_Vmax
GAPDH_Vmax |
T | 420.0 | mmole_per_min | ||||
PGK_keq meta_PGK_keq
PGK_keq |
T | 6.95864405248854 | dimensionless | None | |||
PGK_k_adp meta_PGK_k_adp
PGK_k_adp |
T | 0.35 | mM | ||||
PGK_k_atp meta_PGK_k_atp
PGK_k_atp |
T | 0.48 | mM | ||||
PGK_k_bpg13 meta_PGK_k_bpg13
PGK_k_bpg13 |
T | 0.002 | mM | ||||
PGK_k_pg3 meta_PGK_k_pg3
PGK_k_pg3 |
T | 1.2 | mM | ||||
PGK_Vmax meta_PGK_Vmax
PGK_Vmax |
T | 420.0 | mmole_per_min | ||||
PGM_keq meta_PGM_keq
PGM_keq |
T | 0.181375378837397 | dimensionless | None | |||
PGM_k_pg3 meta_PGM_k_pg3
PGM_k_pg3 |
T | 5.0 | mM | ||||
PGM_k_pg2 meta_PGM_k_pg2
PGM_k_pg2 |
T | 1.0 | mM | ||||
PGM_Vmax meta_PGM_Vmax
PGM_Vmax |
T | 420.0 | mmole_per_min | ||||
EN_keq meta_EN_keq
EN_keq |
T | 0.054476985386756 | dimensionless | None | |||
EN_k_pep meta_EN_k_pep
EN_k_pep |
T | 1.0 | mM | ||||
EN_k_pg2 meta_EN_k_pg2
EN_k_pg2 |
T | 1.0 | mM | ||||
EN_Vmax meta_EN_Vmax
EN_Vmax |
T | 35.994 | mmole_per_min | ||||
PKn_n
PKn_n |
T | 3.5 | dimensionless | None | |||
PKp_n
PKp_n |
T | 3.5 | dimensionless | None | |||
PKn_n_fbp
PKn_n_fbp |
T | 1.8 | dimensionless | None | |||
PKp_n_fbp
PKp_n_fbp |
T | 1.8 | dimensionless | None | |||
PKn_alpha
PKn_alpha |
T | 1.0 | dimensionless | None | |||
PKp_alpha
PKp_alpha |
T | 1.1 | dimensionless | None | |||
PKn_k_fbp meta_PKn_k_fbp
PKn_k_fbp |
T | 0.00016 | mM | ||||
PKp_k_fbp meta_PKp_k_fbp
PKp_k_fbp |
T | 0.00035 | mM | ||||
PKn_k_pep meta_PKn_k_pep
PKn_k_pep |
T | 0.58 | mM | ||||
PKp_k_pep meta_PKp_k_pep
PKp_k_pep |
T | 1.1 | mM | ||||
PKn_ba
PKn_ba |
T | 0.08 | dimensionless | None | |||
PKp_ba
PKp_ba |
T | 0.04 | dimensionless | None | |||
PK_ae
PK_ae |
T | 1.0 | dimensionless | None | |||
PKn_k_pep_end meta_PKn_k_pep_end
PKn_k_pep_end |
T | 0.08 | mM | ||||
PK_k_adp meta_PK_k_adp
PK_k_adp |
T | 2.3 | mM | ||||
PK_Vmax meta_PK_Vmax
PK_Vmax |
T | 46.2 | mmole_per_min | ||||
PKn_f
PKn_f |
F | dimensionless | None | ||||
PKp_f
PKp_f |
F | dimensionless | None | ||||
PKn_alpha_inp
PKn_alpha_inp |
F | dimensionless | None | ||||
PKp_alpha_inp
PKp_alpha_inp |
F | dimensionless | None | ||||
PKn_pep_inp
PKn_pep_inp |
F | mM | |||||
PKp_pep_inp
PKp_pep_inp |
F | mM | |||||
PKn
PKn |
F | mmole_per_min | |||||
PKp
PKp |
F | mmole_per_min | |||||
PEPCK_keq meta_PEPCK_keq
PEPCK_keq |
T | 336.956521586429 | mM | ||||
PEPCK_k_pep meta_PEPCK_k_pep
PEPCK_k_pep |
T | 0.237 | mM | ||||
PEPCK_k_gdp meta_PEPCK_k_gdp
PEPCK_k_gdp |
T | 0.0921 | mM | ||||
PEPCK_k_co2 meta_PEPCK_k_co2
PEPCK_k_co2 |
T | 25.5 | mM | ||||
PEPCK_k_oaa meta_PEPCK_k_oaa
PEPCK_k_oaa |
T | 0.0055 | mM | ||||
PEPCK_k_gtp meta_PEPCK_k_gtp
PEPCK_k_gtp |
T | 0.0222 | mM | ||||
PEPCK_Vmax meta_PEPCK_Vmax
PEPCK_Vmax |
T | 0.0 | mmole_per_min | ||||
PEPCKM_Vmax meta_PEPCKM_Vmax
PEPCKM_Vmax |
T | 546.0 | mmole_per_min | ||||
PC_k_atp meta_PC_k_atp
PC_k_atp |
T | 0.22 | mM | ||||
PC_k_pyr meta_PC_k_pyr
PC_k_pyr |
T | 0.22 | mM | ||||
PC_k_co2 meta_PC_k_co2
PC_k_co2 |
T | 3.2 | mM | ||||
PC_k_acoa meta_PC_k_acoa
PC_k_acoa |
T | 0.015 | mM | ||||
PC_n
PC_n |
T | 2.5 | dimensionless | None | |||
PC_Vmax meta_PC_Vmax
PC_Vmax |
T | 168.0 | mmole_per_min | ||||
LDH_keq meta_LDH_keq
LDH_keq |
T | 0.000278321076004752 | dimensionless | None | |||
LDH_k_pyr meta_LDH_k_pyr
LDH_k_pyr |
T | 0.495 | mM | ||||
LDH_k_lac meta_LDH_k_lac
LDH_k_lac |
T | 31.98 | mM | ||||
LDH_k_nad meta_LDH_k_nad
LDH_k_nad |
T | 0.984 | mM | ||||
LDH_k_nadh meta_LDH_k_nadh
LDH_k_nadh |
T | 0.027 | mM | ||||
LDH_Vmax meta_LDH_Vmax
LDH_Vmax |
T | 12.6 | mmole_per_min | ||||
LACT_keq meta_LACT_keq
LACT_keq |
T | 1.0 | dimensionless | None | |||
LACT_k_lac meta_LACT_k_lac
LACT_k_lac |
T | 0.8 | mM | ||||
LACT_Vmax meta_LACT_Vmax
LACT_Vmax |
T | 5.418 | mmole_per_min | ||||
PYRTM_keq meta_PYRTM_keq
PYRTM_keq |
T | 1.0 | dimensionless | None | |||
PYRTM_k_pyr meta_PYRTM_k_pyr
PYRTM_k_pyr |
T | 0.1 | mM | ||||
PYRTM_Vmax meta_PYRTM_Vmax
PYRTM_Vmax |
T | 42.0 | mmole_per_min | ||||
PEPTM_keq meta_PEPTM_keq
PEPTM_keq |
T | 1.0 | dimensionless | None | |||
PEPTM_k_pep meta_PEPTM_k_pep
PEPTM_k_pep |
T | 0.1 | mM | ||||
PEPTM_Vmax meta_PEPTM_Vmax
PEPTM_Vmax |
T | 33.6 | mmole_per_min | ||||
PDH_k_pyr meta_PDH_k_pyr
PDH_k_pyr |
T | 0.025 | mM | ||||
PDH_k_coa meta_PDH_k_coa
PDH_k_coa |
T | 0.013 | mM | ||||
PDH_k_nad meta_PDH_k_nad
PDH_k_nad |
T | 0.05 | mM | ||||
PDH_ki_acoa meta_PDH_ki_acoa
PDH_ki_acoa |
T | 0.035 | mM | ||||
PDH_ki_nadh meta_PDH_ki_nadh
PDH_ki_nadh |
T | 0.036 | mM | ||||
PDHn_alpha
PDHn_alpha |
T | 5.0 | dimensionless | None | |||
PDHp_alpha
PDHp_alpha |
T | 1.0 | dimensionless | None | |||
PDH_Vmax meta_PDH_Vmax
PDH_Vmax |
T | 13.44 | mmole_per_min | ||||
PDH_base
PDH_base |
F | mmole_per_min | |||||
PDHn
PDHn |
F | mmole_per_min | |||||
PDHp
PDHp |
F | mmole_per_min | |||||
CS_keq meta_CS_keq
CS_keq |
T | 266599.030842759 | dimensionless | None | |||
CS_k_oaa meta_CS_k_oaa
CS_k_oaa |
T | 0.002 | mM | ||||
CS_k_acoa meta_CS_k_acoa
CS_k_acoa |
T | 0.016 | mM | ||||
CS_k_cit meta_CS_k_cit
CS_k_cit |
T | 0.42 | mM | ||||
CS_k_coa meta_CS_k_coa
CS_k_coa |
T | 0.07 | mM | ||||
CS_Vmax meta_CS_Vmax
CS_Vmax |
T | 4.2 | mmole_per_min | ||||
NDKGTPM_keq meta_NDKGTPM_keq
NDKGTPM_keq |
T | 1.0 | dimensionless | None | |||
NDKGTPM_k_atp meta_NDKGTPM_k_atp
NDKGTPM_k_atp |
T | 1.33 | mM | ||||
NDKGTPM_k_adp meta_NDKGTPM_k_adp
NDKGTPM_k_adp |
T | 0.042 | mM | ||||
NDKGTPM_k_gtp meta_NDKGTPM_k_gtp
NDKGTPM_k_gtp |
T | 0.15 | mM | ||||
NDKGTPM_k_gdp meta_NDKGTPM_k_gdp
NDKGTPM_k_gdp |
T | 0.031 | mM | ||||
NDKGTPM_Vmax meta_NDKGTPM_Vmax
NDKGTPM_Vmax |
T | 420.0 | mmole_per_min | ||||
OAAFLX_Vmax meta_OAAFLX_Vmax
OAAFLX_Vmax |
T | 0.0 | mmole_per_min | ||||
ACOAFLX_Vmax meta_ACOAFLX_Vmax
ACOAFLX_Vmax |
T | 0.0 | mmole_per_min | ||||
CITFLX_Vmax meta_CITFLX_Vmax
CITFLX_Vmax |
T | 0.0 | mmole_per_min |
Rules [52] | assignment | name | derived units | sbo | cvterm | |
---|---|---|---|---|---|---|
cyto
f47c3fcca6114af0b52d77bed23dfcbd |
= | |||||
mito
6dc6493ed7c64aec9164a8728f1cadce |
= | |||||
V_mito
fc80971c0be14aae99c63603d5555430 |
= | |||||
flux_conversion
c444863f68e447e8a8b7e64196714611 |
= | |||||
f_gly
860185cb86124b7694e1c515309fecaf |
= | None | ||||
f_glyglc
833ee01836344820bf83baa38d6296a4 |
= | None | ||||
ins
ac9c0957158648e2866793f97d03ba36 |
= | |||||
ins_norm
486766bc763442b9a889d552e5a5d73d |
= | |||||
glu
491d57bcb99a4de0ad9c7362d0cdf68c |
= | |||||
glu_norm
723cd1fa65d54867ba83719078d2d824 |
= | |||||
epi
a107b97fdf554bbfb4c1e30a05ae1770 |
= | |||||
epi_norm
26bd766f2fe54b00a21f3ff533a5e3a5 |
= | |||||
K_ins
a6219a0beb1047d2bb0352b83af0cf53 |
= | |||||
K_glu
14ce72a506024052bdd81648684e1365 |
= | |||||
K_epi
6d7c3977cc7440a9b62c024644e6a0fb |
= | |||||
gamma
af13d0800f0f4badb91a476d08d9290f |
= | None | ||||
nadh_tot meta_1d5d26c08dcd4f9faad68a73686d78c7
a15c20a9509b43998d6a37bea0a7c788 |
= | |||||
atp_tot meta_64d0418312a0486388d29216b7c374ef
dc220df3e23b4bd1960cd3d48f37b599 |
= | |||||
utp_tot meta_c13bd19faebb4637974cc3b38cbc65ad
ffccb3da34c643d58383c67f873a7b0c |
= | |||||
gtp_tot meta_d20842bbc6a248e6bef750a932609d0e
28f353710a684bb8913ec86b5068f5ca |
= | |||||
nadh_mito_tot meta_6a648c9c888a4310b3fb77e46d80edaa
41d762cf22cb44ce8806a20dbcbbd409 |
= | |||||
atp_mito_tot meta_54f88c313e1b472f8095c178b17fad75
14fe602290e241a09e9d13fff0c516b1 |
= | |||||
gtp_mito_tot meta_11cd9fc8ae36458d99fc7ec9fc352c8f
19f8b2c199714b1eac6657d6ba6c03c1 |
= | |||||
HGP
488e10588f404fa587066ac086155b19 |
= | |||||
GNG
02888cd4987c4b8689ca52a94e4d1759 |
= | |||||
GLY
162b6157b917487fa7c53ebf04a8cb25 |
= | |||||
GK_gc_free
49d1f5c864b54f8fb14e166edb033f55 |
= | None | ||||
GS_fs
c0825597f4e944d79e10cbaef5ef029b |
= | None | ||||
GSn_k_udpglc
ca19e80a64db4e7792170aa3e2126066 |
= | |||||
GSp_k_udpglc
b1e6e5337cd442aa9309e2dc322e053b |
= | |||||
GSn
8f8b6f47644c440b8e7c6017d2af669c |
= | |||||
GSp
61aae08f53524951a2629abc00144277 |
= | |||||
GP_fmax
738fb8290c8640ec9b54d90c448ecfd7 |
= | None | ||||
GPn_Vmax
53609ee9964f480c9b6a0b1349bdb729 |
= | |||||
GPn
d81b424ea6ed47e585b6ed9d330a31ab |
= | |||||
GPp_Vmax
f4fa0194c21f4e7d9d162e33ef7f5ca5 |
= | |||||
GPp
00eeaf4be3d54638a9ac5d770da8a7e7 |
= | |||||
PFK2n
a7b902b88d96448d95032a9ce779d502 |
= | |||||
PFK2p
cf37f1d2ab1e44c7812989caeeb6c890 |
= | |||||
FBP2n
4a1324edd5e74f0a9310bd4bfeaa5da2 |
= | |||||
FBP2p
9a05260668914840bc2f39dc9e05ee74 |
= | |||||
PKn_f
2fab2d47cba242f5a7691c3cb33305fd |
= | None | ||||
PKp_f
ea66bc2066414ae58b4ba8538df3ee86 |
= | None | ||||
PKn_alpha_inp
92bb950ec38b45a2812afc2b332932a3 |
= | None | ||||
PKp_alpha_inp
3c74c5cb26ca45fea70fb5fdfefa3afc |
= | None | ||||
PKn_pep_inp
8b084ca989374fed81d33de85c2a63e6 |
= | |||||
PKp_pep_inp
9f8deffd8aab4dc88283dc6d72dc9999 |
= | |||||
PKn
f33d5aeec2544d68b7018dd7544e70cc |
= | |||||
PKp
b94611bf020947cf8a56cd290aee3516 |
= | |||||
PDH_base
53dc6e1f240342c4b000ccb28d7ddefb |
= | |||||
PDHn
32a9219244d04ab3b564dcc310415823 |
= | |||||
PDHp
357f8c1d2d134a5dacfc5f395e727b7d |
= |
Reactions [36] | name | equation | modifiers | kinetic law | derived units | sbo | cvterm | |
---|---|---|---|---|---|---|---|---|
GLUT2 meta_GLUT2
GLUT2 |
GLUT2 glucose transporter |
⇆ | glc_ext ⇆ glc | |||||
GK meta_GK
GK |
Glucokinase |
➞ | glc + atp ➞ glc6p + adp + h | glc1p fru6p |
||||
G6PASE meta_G6PASE
G6PASE |
D-Glucose-6-phosphate Phosphatase |
➞ | glc6p + h2o ➞ glc + phos | |||||
GPI meta_GPI
GPI |
D-Glucose-6-phosphate Isomerase |
⇆ | glc6p ⇆ fru6p | |||||
G16PI meta_G16PI
G16PI |
Glucose 1-phosphate 1,6-phosphomutase |
⇆ | glc1p ⇆ glc6p | BQB_IS SBO:0000176; 5.4.2.2; 23539; R00959; GO:0004614 BQB_HAS_VERSION P36871; Q96G03; PR:000012614; PR:000012615 |
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UPGASE meta_UPGASE
UPGASE |
UTP:Glucose-1-phosphate uridylyltransferase |
⇆ | glc1p + h + utp ⇆ pp + udpglc | |||||
PPASE meta_PPASE
PPASE |
Pyrophosphate phosphohydrolase |
➞ | pp + h2o ➞ h + 2.0 phos | |||||
GS meta_GS
GS |
Glycogen synthase |
➞ | udpglc + h2o ➞ udp + h + glyglc | glc6p | ||||
GP meta_GP
GP |
Glycogen-Phosphorylase |
⇆ | glyglc + phos ⇆ glc1p + h2o | phos amp glc |
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NDKGTP meta_NDKGTP
NDKGTP |
Nucleoside-diphosphate kinase (ATP, GTP) |
⇆ | atp + gdp ⇆ adp + gtp | |||||
NDKUTP meta_NDKUTP
NDKUTP |
Nucleoside-diphosphate kinase (ATP, UTP) |
⇆ | atp + udp ⇆ adp + utp | |||||
AK meta_AK
AK |
ATP:AMP phosphotransferase (Adenylatkinase) |
⇆ | amp + atp ⇆ 2.0 adp | |||||
PFK2 meta_PFK2
PFK2 |
ATP:D-fructose-6-phosphate 2-phosphotransferase |
➞ | fru6p + atp ➞ fru26bp + adp + h | |||||
FBP2 meta_FBP2
FBP2 |
D-Fructose-2,6-bisphosphate 2-phosphohydrolase |
➞ | fru26bp + h2o ➞ fru6p + phos | |||||
PFK1 meta_PFK1
PFK1 |
ATP:D-fructose-6-phosphate 1-phosphotransferase |
➞ | fru6p + atp ➞ fru16bp + adp + h | fru26bp | ||||
FBP1 meta_FBP1
FBP1 |
D-Fructose-1,6-bisphosphate 1-phosphohydrolase |
➞ | fru16bp + h2o ➞ fru6p + phos | fru26bp | BQB_IS SBO:0000176; 3.1.3.11; 11065; R00762; GO:0042132 BQB_HAS_VERSION O00757; P09467; PR:000007365; PR:000007366 |
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ALD meta_ALD
ALD |
Aldolase |
⇆ | fru16bp ⇆ grap + dhap | |||||
TPI meta_TPI
TPI |
Triosephosphate Isomerase |
⇆ | dhap ⇆ grap | |||||
GAPDH meta_GAPDH
GAPDH |
D-Glyceraldehyde-3-phosphate:NAD+ oxidoreductase |
⇆ | grap + nad + phos ⇆ bpg13 + nadh + h | |||||
PGK meta_PGK
PGK |
Phosphoglycerate Kinase |
⇆ | adp + bpg13 ⇆ atp + pg3 | |||||
PGM meta_PGM
PGM |
2-Phospho-D-glycerate 2,3-phosphomutase |
⇆ | pg3 ⇆ pg2 | BQB_IS SBO:0000176; 5.4.2.1; R01518; GO:0004619 BQB_IS_VERSION_OF 15904 BQB_HAS_VERSION P18669; P15259; PR:000012592; PR:000012593 |
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EN meta_EN
EN |
2-Phospho-D-glycerate hydro-lyase (enolase) |
⇆ | pg2 ⇆ h2o + pep | BQB_IS SBO:0000176; 4.2.1.11; 10167; R00658; GO:0004634 BQB_HAS_VERSION P06733; P09104; P13929; PR:000007080; PR:000007081; PR:000007082 |
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PK meta_PK
PK |
Pyruvatkinase |
➞ | pep + adp + h ➞ pyr + atp | fru16bp | ||||
PEPCK meta_PEPCK
PEPCK |
PEPCK cyto |
⇆ | gtp + oaa ⇆ co2 + gdp + pep | |||||
PEPCKM meta_PEPCKM
PEPCKM |
PEPCK mito |
⇆ | gtp_mito + oaa_mito ⇆ co2_mito + gdp_mito + pep_mito | |||||
PC meta_PC
PC |
Pyruvate Carboxylase |
➞ | atp_mito + pyr_mito + co2_mito + h2o_mito ➞ adp_mito + oaa_mito + phos_mito + 2.0 h | acoa_mito | ||||
LDH meta_LDH
LDH |
Lactate Dehydrogenase |
⇆ | pyr + nadh + h ⇆ lac + nad | BQB_IS SBO:0000176; 1.1.1.27; 23447; R00703; GO:0004459 BQB_HAS_VERSION P00338; P07195; P07864; PR:000009739; PR:000009742; PR:000009743 |
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LACT meta_LACT
LACT |
Lactate transport (import) |
⇆ | lac_ext ⇆ lac | |||||
PYRTM meta_PYRTM
PYRTM |
Pyruvate transport (mito) |
⇆ | pyr ⇆ pyr_mito | |||||
PEPTM meta_PEPTM
PEPTM |
PEP Transport (export mito) |
⇆ | pep_mito ⇆ pep | |||||
PDH meta_PDH
PDH |
Pyruvate Dehydrogenase |
➞ | pyr_mito + coa_mito + nad_mito ➞ acoa_mito + co2_mito + nadh_mito | BQB_IS SBO:0000176; 1.2.4.1; 28045; R00209; GO:0034604 BQB_HAS_PART P08559; P11177; P10515; P09622; O00330; PR:000012493; PR:000012495; PR:000006504; PR:000006506; PR:000012496 |
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CS meta_CS
CS |
Citrate Synthase |
⇆ | acoa_mito + oaa_mito + h2o_mito ⇆ cit_mito + coa_mito + h_mito | |||||
NDKGTPM meta_NDKGTPM
NDKGTPM |
Nucleoside-diphosphate kinase (ATP, GTP) mito |
⇆ | atp_mito + gdp_mito ⇆ adp_mito + gtp_mito | |||||
OAAFLX
OAAFLX |
oxalacetate influx |
➞ | ➞ oaa_mito | |||||
ACOAFLX
ACOAFLX |
acetyl-coa efflux |
➞ | acoa_mito ➞ | |||||
CITFLX
CITFLX |
citrate efflux |
➞ | cit_mito ➞ |