# sbml2cellml

> Conversion of SBML models to CellML

The complete documentation from https://matthiaskoenig.github.io/sbml2cellml, one section per page.

---

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# sbml2cellml: conversion between SBML and CellML
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`sbml2cellml` converts between [SBML (Systems Biology Markup Language)](https://sbml.org) and [CellML 2.0](https://cellml.org), so that a model developed with one tooling can be used, simulated and shared in the other ecosystem. The source code is available from [https://github.com/matthiaskoenig/sbml2cellml](https://github.com/matthiaskoenig/sbml2cellml).

## Features

- conversion of compartments, parameters, species, assignment and rate rules and reactions into a single CellML component
- conversion of the units: unit definitions, the units of numbers and, for a model with a complete unit annotation, the units of every variable
- names, notes, SBO terms, annotations and the model history as RDF next to the CellML model, restored in the conversion back to SBML
- conversion of CellML models to SBML: parameters with rules, unit definitions and units of numbers, resets as events, imports resolved
- validation of the result with [libcellml](https://libcellml.org/)
- timecourse simulation of the SBML with [roadrunner](https://www.libroadrunner.org/) and of the CellML with [libopencor](https://opencor.ws/libopencor/), both optional, see [Simulation](simulation.md)
- the `sbml2cellml` and `cellml2sbml` command lines
- the SBML test suite harness: every semantic case through both converters and both simulators, results on the [SBML test suite](testsuite.md) page
- the same check for the manually curated models of [BioModels](https://www.biomodels.org), results on the [BioModels](biomodels.md) page

## Quickstart

```python
from pathlib import Path
from sbml2cellml import convert_sbml2cellml

model = convert_sbml2cellml(Path("model.xml"), cellml_path=Path("model.cellml"))
```

or on the command line:

```bash
sbml2cellml model.xml -o model.cellml
cellml2sbml model.cellml -o model.xml
```

The conversion is validated with [libcellml](https://libcellml.org/); the resulting file can be simulated with [libopencor](https://opencor.ws/libopencor/) and compared with the roadrunner simulation of the SBML model, see [Simulation](simulation.md). The [roundtrip example](roundtrip.md) shows the complete pipeline for the repressilator: the scripts, the three models and their simulations side by side.

## What is converted

The converter puts every SBML compartment, parameter and species as a variable into a single CellML component, together with the variable of integration `time` when the model has differential equations (rate rules or reactions).

| SBML | CellML |
| --- | --- |
| compartment | variable with the size as initial value |
| parameter | variable with the value as initial value |
| species | variable in amount (`hasOnlySubstanceUnits`) or concentration |
| species in concentration whose compartment changes in time | a second variable `<species>_amount` which the reactions change, and the equation `species = amount / compartment`: the amount is kept when the size changes, not the concentration |
| assignment rule | equation; its target has no initial value, the equation defines it from the start |
| rate rule | differential equation |
| reaction | variable of its rate with the kinetic law as equation; the rate times the stoichiometry is added to the differential equation of every reactant and product which is not a boundary species, divided by the size of the compartment for a species in concentration |
| conversion factor of a species or the model | factor of the reaction terms of the species |
| species reference with an id | variable of its stoichiometry, which rules may set |
| reaction id in a formula | the variable of the rate of the reaction |
| unit definition | units of the same name; the scale becomes the prefix, the multiplier `m` of a unit with the exponent `e` becomes `m^e` (CellML applies the exponent to the prefix only) |
| unit kinds `item` and `avogadro` | new base units `item`, dimensionless units `avogadro` with the multiplier 6.02214179e23; every other unit kind is a standard unit of CellML |
| units of a compartment, parameter or species | units of the variable when the unit annotation of the model is complete, else every variable is `dimensionless`, see [Units](conversion.md#units) |
| numbers in formulas | real numbers with their units, `dimensionless` when they have none |
| time and avogadro symbols | the variable of integration `time`, the number 6.02214179e23 |
| id which is a symbol of the formula syntax of libsbml (`avogadro`, `pi`, `NaN`, `true`) | variable of that name like every other id: the formulas are converted as the MathML trees of the model, never as text |
| rateOf symbol | the right-hand side of the differential equation of its variable, 0 without one |
| delay symbol | not yet |
| rule or kinetic law without math | ignored, it has no effect |
| initial assignment | evaluated to the initial value; without math it has no effect |
| infinite or NaN value | the equation `x = INF` (or `-INF`, `NaN`), not for a state |
| function definition | calls replaced by the body of the function |
| names, notes, SBO terms, annotations (CV terms) and the model history | RDF file next to the CellML file which points at the `id` of the elements, see [Metadata](conversion.md#metadata); `cellml2sbml` reads it back |
| local parameter of a kinetic law | variable `<reaction>_<parameter>` (numeric suffix when taken) |
| event | not yet, a warning is logged |
| algebraic rule | implicit equation `0 = formula` for the variable the rule determines, which starts from the solution at the start time; the constants of the rule become equations `y = value` |
| `plus`, `times`, `and`, `or`, `xor` with less than two arguments | their value (the argument or the identity element) |

The reverse direction, [CellML to SBML](conversion.md#cellml-to-sbml), maps every variable to a parameter with rules and converts units and resets.

The [conversion issues](conversion-issues.md) list what is not converted yet, the [SBML test suite](testsuite.md) and [BioModels](biomodels.md) pages how many of the semantic test cases and of the curated models pass.

The [release notes](release-notes/index.md) list the changes of every version.

## Citation

[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.22829187.svg)](https://doi.org/10.5281/zenodo.22829187)

If you use `sbml2cellml` please cite the archived software on [Zenodo](https://doi.org/10.5281/zenodo.22829187):

> König, M. (2026). *sbml2cellml: conversion of SBML models to CellML* (Version 0.3.0) [Computer software]. Zenodo. https://doi.org/10.5281/zenodo.22838601

```bibtex
@software{konig_sbml2cellml,
  author    = {König, Matthias},
  title     = {sbml2cellml: conversion of SBML models to CellML},
  year      = {2026},
  month     = sep,
  version   = {0.3.0},
  publisher = {Zenodo},
  doi       = {10.5281/zenodo.22838601},
  url       = {https://doi.org/10.5281/zenodo.22838601},
}
```

## License

- Source Code: [MIT](https://opensource.org/license/MIT)
- Documentation: [CC BY-SA 4.0](http://creativecommons.org/licenses/by-sa/4.0/)

## Funding

Matthias König was supported by the Federal Ministry of Education and Research (BMBF, Germany) within the research network Systems Medicine of the Liver (LiSyM, grant number 031L0054) and within ATLAS by grant number 031L0304B, and by the German Research Foundation (DFG) within the Research Unit Program FOR 5151 QuaLiPerF (Quantifying Liver Perfusion-Function Relationship in Complex Resection - A Systems Medicine Approach) by grant number 436883643 and by grant number 465194077 (Priority Programme SPP 2311, Subproject SimLivA).

---

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# Installation

`sbml2cellml` requires python 3.13 or 3.14 and is available from [pypi](https://pypi.org/project/sbml2cellml). The dependencies [python-libsbml](https://pypi.org/project/python-libsbml/) and [libcellml](https://pypi.org/project/libcellml/) ship wheels for Linux, macOS and Windows.

!!! warning "Windows"

    Windows is currently not supported: the Windows wheels of libcellml 0.7.1 contain ARM64 binaries, which do not load on x64 Windows ([cellml/libcellml#1460](https://github.com/cellml/libcellml/issues/1460)). Linux and macOS are tested.

## With uv

```bash
uv add sbml2cellml
```

or into an existing virtual environment

```bash
uv pip install sbml2cellml
```

## With pip

```bash
pip install sbml2cellml
```

## Simulators { #simulators }

The simulators are optional, see [Simulation](simulation.md): [roadrunner](https://www.libroadrunner.org/) simulates the SBML models, [libopencor](https://opencor.ws/libopencor/) the CellML models. The `simulate` extra adds libopencor together with pandas and matplotlib for the timecourse results and plots of [`sbml2cellml.simulate`](api/simulate.md):

```bash
pip install "sbml2cellml[simulate]"
```

### roadrunner

roadrunner is available from [pypi](https://pypi.org/project/libroadrunner/):

```bash
pip install libroadrunner
```

### libopencor { #simulation-with-libopencor }

libopencor is available from [pypi](https://pypi.org/project/libopencor/) and installed with the `simulate` extra. Wheels exist for python 3.12 to 3.14 on Linux (x86_64, aarch64), macOS (Intel, Apple silicon) and Windows. Without libopencor everything except `sbml2cellml.simulate` works.

## Running the SBML test suite

The `testsuite` extra adds `libroadrunner` and `requests` for the `sbml2cellml-testsuite` command:

```bash
pip install "sbml2cellml[testsuite]"
```

It includes the `simulate` extra and with it libopencor.

## Development version

The current state of the `develop` branch is installed from GitHub:

```bash
pip install git+https://github.com/matthiaskoenig/sbml2cellml.git@develop
```

To work on the repository itself see [Development](development.md).

---

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# Conversion

`sbml2cellml` converts in both directions: [SBML to CellML](#sbml-to-cellml) and [CellML to SBML](#cellml-to-sbml). What cannot be converted yet is listed in the [conversion issues](conversion-issues.md).

## SBML to CellML

### Python

[`convert_sbml2cellml`](api/sbml2cellml.md) reads an SBML file, builds the CellML model with libcellml and returns it. With `cellml_path` the CellML is written as well:

```python
from pathlib import Path
from sbml2cellml import convert_sbml2cellml

model = convert_sbml2cellml(Path("model.xml"), cellml_path=Path("model.cellml"))
```

By default the model is validated: the libcellml `Validator` checks it against the CellML specification and the `Analyser` checks that every variable is defined by exactly one equation or initial value. If either reports an error a `CellMLValidationError` with the issues is raised and nothing is written. `validate=False` skips the check, which is useful to inspect a conversion with known gaps; the issues are then available from [`validate_model`](api/cellml.md):

```python
from sbml2cellml.cellml import errors, format_issues, validate_model

model = convert_sbml2cellml(Path("model.xml"), validate=False)
issues = validate_model(model)
print(format_issues(errors(issues)))
```

A file without a model raises `SBML2CellMLConversionError`.

### Logging

The package logs the conversion steps and the constructs it skips (events, algebraic rules which determine no variable, initial assignments libsbml cannot evaluate, unset initial values) and does not print. Scripts enable the rich output of the package with

```python
from sbml2cellml import log

log.enable_rich_logging()
```

An application configures the `sbml2cellml` logger like any other logger.

### Command line

```bash
sbml2cellml model.xml                      # writes model.cellml next to the input
sbml2cellml model.xml -o out/model.cellml  # explicit output
sbml2cellml model.xml --no-validate        # write even if libcellml reports errors
sbml2cellml model.xml --no-metadata        # do not write model.rdf
sbml2cellml model.xml -v                   # log the conversion steps
```

The command exits with 1 and the message on stderr when the input does not exist, has no model, or the validation fails.

### Metadata

CellML 2.0 has no place for metadata: the elements of a model must be in the CellML or MathML namespace, and the only thing a model offers to the outside is the `id` of an element. The names, notes, SBO terms, annotations and the history of the SBML model therefore go into an RDF/XML file next to the CellML file, `model.rdf` for `model.cellml`, in which `model.cellml#<id>` is the subject of an element. The model, every variable and all units have an `id` for this: a variable its name, units `units_<name>`, the model its name. A model without metadata has no file, and `metadata=False` or `--no-metadata` writes none.

The RDF is the one of SBML annotations, written and parsed by libsbml, so an annotation looks as in the SBML file (a level 2 model gives the RDF of level 3):

| SBML | RDF |
| --- | --- |
| `name` | `dcterms:title` (not when the name is the id) |
| `notes` | `dcterms:description` with `rdf:parseType="Literal"`, the XHTML as it is |
| `sboTerm` | the first `bqbiol:is` (`bqmodel:is` for the model) with the single resource `https://identifiers.org/SBO:0000252` |
| CV terms | `bqbiol:*` and `bqmodel:*` with an `rdf:Bag` of resources, nested terms included |
| history | `dcterms:creator` (vCard 4), `dcterms:created`, `dcterms:modified` |

The elements with metadata are the ones with a CellML element: the model, compartments, species, parameters, local parameters, species references with an id, reactions (the variable of the rate) and unit definitions. [`convert_cellml2sbml`](#cellml-to-sbml) reads the file back, so the metadata survives the roundtrip; the [roundtrip example](roundtrip.md) shows the files.

### Units

Every unit definition becomes CellML units of the same name, and every number in a formula keeps its units (`2 mM` is `<cn cellml:units="mM">2</cn>`, a number without units is `dimensionless`). The unit kinds of SBML are the standard units of CellML, except for `item` (new base units) and `avogadro` (dimensionless units with its value as multiplier).

The variables get units when the unit annotation of the SBML model is complete, i.e., when the units of every variable are known:

| variable | units |
| --- | --- |
| `time` | `timeUnits` of the model |
| compartment | its `units`, else the `volumeUnits`, `areaUnits` or `lengthUnits` of the model by its `spatialDimensions` |
| parameter, local parameter | its `units` |
| species with `hasOnlySubstanceUnits` | its `substanceUnits`, else the `substanceUnits` of the model |
| variable `<species>_amount` of a species in concentration whose compartment changes | the units of the substance, as for a species with `hasOnlySubstanceUnits` |
| other species (a concentration) | the units of the substance per the units of the compartment: the unit definition of the model which is identical to it (e.g., `mM`), else new units `mmole_per_litre` |
| stoichiometry of a species reference | `dimensionless` |
| rate of a reaction | `extentUnits` per `timeUnits` of the model |

SBML level 1 and 2 have the units `substance`, `time`, `volume`, `area` and `length` built in, which count as set. Units which are not set are unknown in SBML, not dimensionless: when the units of one variable are missing, all variables stay `dimensionless` and a warning names the variables without units. The values are the same either way, CellML does not convert units within a component.


`examples/models/` in the repository holds the glimepiride models of [matthiaskoenig/glimepiride-model](https://github.com/matthiaskoenig/glimepiride-model), which `examples/glimepiride_example.py` converts. All of them convert to valid CellML; their unit annotation is complete, so the CellML variables have the units of the SBML models.

## CellML to SBML

[`convert_cellml2sbml`](api/cellml2sbml.md) reads a CellML 2.0 file, resolves its imports relative to the file, analyses it with libcellml and builds an SBML level 3 version 2 document:

```python
from pathlib import Path
from sbml2cellml import convert_cellml2sbml

doc = convert_cellml2sbml(Path("model.cellml"), sbml_path=Path("model.xml"))
```

or on the command line:

```bash
cellml2sbml model.cellml                 # writes model.xml next to the input
cellml2sbml model.cellml -o out/model.xml
cellml2sbml model.cellml --no-validate   # write even if libsbml reports errors
cellml2sbml model.cellml --no-metadata   # do not read model.rdf
cellml2sbml model.cellml -v
```

By default the document is checked with the libsbml consistency checks and a `SBMLValidationError` with the messages is raised on errors (unit problems are warnings and do not stop the conversion).

### Mapping

CellML has no species, compartments or reactions: every variable becomes a parameter, the equations become rules. The libcellml analyser decides the kind of every variable and equation and merges the variables which are connected across components.

| CellML | SBML |
| --- | --- |
| variable of integration | the `time` symbol, `timeUnits` of the model |
| constant | `parameter constant="true"` with the initial value |
| computed constant (`c = 2 * k`) | `parameter constant="true"` with an initial assignment |
| algebraic variable | `parameter constant="false"` with an assignment rule |
| state (`dx/dt = ...`) | `parameter constant="false"` with a rate rule |
| initial value given as a variable name | initial assignment |
| standard units | the SBML unit kind of the same name |
| custom units | unit definition expanded to base kinds; the prefix becomes the scale, the multiplier `m` of a unit with the exponent `e` the multiplier `m^(1/e)` (SBML applies the exponent to the multiplier as well) |
| units of a number | `sbml:units` of the number, by the id of the unit definition |
| new base units `item` | the unit kind `item` |
| variable written only by a reset | parameter constant="false" (an event assignment needs a non-constant target) |
| reset | event with the trigger `test_variable == test_value`, priority `-order`, one event assignment |
| components and connections | one flat namespace; a variable name used by several unconnected variables is prefixed with its component (`cell_x`), the CellML name is kept as `name`; the model id and event ids also get a numeric suffix when they collide with a variable id |
| imports | resolved and flattened before the conversion |
| metadata in `model.rdf` next to `model.cellml`, see [Metadata](#metadata) | name, notes, SBO term, CV terms and history of the parameter of the variable, the unit definition of the units and the model with that `id`; the `id` is the `metaid` |
| implicit equation (`a + s = 5`, a model of type DAE or NLA) | algebraic rule `0 = a + s - 5`, the unknown a `parameter constant="false"` with its initial value (the guess of the solver) |
| model which cannot be analysed (e.g. underconstrained) | CellML2SBMLConversionError |

### Limitations

- A system of coupled implicit equations (`x + y = 4`, `x - y = 2`) cannot be analysed by libcellml, and external variables are not supported; both raise `CellML2SBMLConversionError`.
- New base units other than `item` have no SBML counterpart and are `dimensionless`, with a warning.
- A reset triggers on the equality of the test variable and the test value. A continuous simulator detects the equality only when the test variable crosses the test value at an integrator step, so a reset may not fire in SBML simulators; the roundtrip harness reports this per model.

---

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# Simulation

Both sides of a conversion can be simulated, which is how a conversion is checked: the SBML model with [roadrunner](https://www.libroadrunner.org/), the CellML model with [libopencor](https://opencor.ws/libopencor/). Both simulators are optional, `sbml2cellml` converts without them.

| model | simulator | how |
| --- | --- | --- |
| SBML | roadrunner | the [roadrunner API](#sbml-with-roadrunner) |
| CellML | libopencor | [`sbml2cellml.simulate.run_timecourse`](#cellml-with-libopencor) |

## Setup

The `simulate` extra adds libopencor together with pandas and matplotlib for the timecourse results and plots; roadrunner is installed on its own, see [Installation](installation.md#simulators):

```bash
pip install "sbml2cellml[simulate]"
pip install libroadrunner
```

!!! warning "One simulator per process"

    roadrunner and libopencor bundle different LLVM versions and crash once both have compiled a model in the same process. Simulate the SBML and the CellML model in separate python processes, e.g., in two scripts which write their results to files. The [SBML test suite](testsuite.md) harness runs every simulator in its own worker process for this reason.

## SBML with roadrunner

roadrunner reads the SBML file and returns the timecourse as a named array, which pandas takes as it is:

```python
import pandas as pd
import roadrunner

rr = roadrunner.RoadRunner("model.xml")
result = rr.simulate(0, 100, steps=100)
df = pd.DataFrame(result, columns=result.colnames)
```

The columns are `time` and the floating species, a species `S1` as concentration `[S1]`. The converted CellML model has one variable per compartment, parameter and species, named by the SBML id, where a species is a concentration unless it has `hasOnlySubstanceUnits` (a species in concentration whose compartment changes in time has the additional variable `<species>_amount`). To get the same columns from roadrunner select them before the simulation:

```python
rr.timeCourseSelections = ["time", "[S1]", "k1", "compartment"]
```

## CellML with libopencor

[`sbml2cellml.simulate`](api/simulate.md) runs a uniform timecourse of a CellML file with libopencor:

```python
from pathlib import Path
from sbml2cellml.simulate import plot_timecourse, run_timecourse

df, units = run_timecourse(Path("model.cellml"), start=0.0, end=100.0, steps=100)
plot_timecourse(df, units)
```

`run_timecourse` returns a pandas data frame with the variable of integration in the first column, followed by the states, the algebraic variables, the constants and the computed constants, and a dictionary with the units of every column. The column names are the variable names of the CellML model, i.e., the SBML ids for a converted model. `steps` is the number of intervals, so the frame has `steps + 1` rows, like the roadrunner result above. `relative_tolerance` and `absolute_tolerance` set the tolerances of the solver (CVODE). `maximum_number_of_steps` is the number of internal steps the solver may take between two time points of the output, 100000 by default: the 500 steps of libopencor end the simulation of many models with `mxstep steps taken before reaching tout`, mostly with tight tolerances or few time points.

A model without differential equations has no variable of integration (the converter leaves `time` out of an SBML model without rate rules and reactions); libopencor computes it as a steady state, and `run_timecourse` returns its values at every requested time point, with the time points in a first column `time`.

libopencor reports a model it cannot simulate, e.g., an invalid or underconstrained model, as issues, which are raised as `SimulationError`, as are two result columns of the same name (the component prefix of the names is dropped). Without libopencor the import of `sbml2cellml.simulate` works, `run_timecourse` raises an `ImportError` with the installation hint.

`examples/cellml_example.py` builds a small model with libcellml directly and simulates it. The [roundtrip example](roundtrip.md) simulates an SBML model, its CellML conversion and the SBML model of the roundtrip and plots the three timecourses side by side.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/roundtrip.md -->

# Roundtrip example

The example converts the repressilator from SBML to CellML and back to SBML and simulates all three models: the SBML model with [roadrunner](https://www.libroadrunner.org/), the CellML model with [libopencor](https://opencor.ws/libopencor/) and the SBML model of the roundtrip with roadrunner again.

| | model | simulator |
| --- | --- | --- |
| 1 | SBML `examples/models/repressilator.xml` | roadrunner |
| 2 | CellML, converted from 1 with `sbml2cellml`, with the metadata of 1 as RDF next to it | libopencor |
| 3 | SBML, converted from 2 with `cellml2sbml` | roadrunner |

The repressilator of [Elowitz and Leibler (2000)](https://doi.org/10.1038/35002125) is a ring of three genes whose proteins LacI, TetR and cI each repress the transcription of the next gene, which makes the protein numbers oscillate. The model is [BIOMD0000000012](https://www.ebi.ac.uk/biomodels/BIOMD0000000012) of BioModels (SBML level 2 version 3, CC0) with its names, notes and annotations, which CellML has no place for: they go into an RDF file next to the CellML model and come back in the SBML model of the roundtrip, see [Metadata](conversion.md#metadata).

## Run the example

The example is `examples/repressilator_example.py` of the [repository](https://github.com/matthiaskoenig/sbml2cellml/tree/develop/examples). It needs both simulators, see [Simulation](simulation.md#setup):

```bash
uv sync --extra dev
uv run python examples/repressilator_example.py
```

The models, the metadata, the timecourses and the figure go to `examples/results/`.

## Convert

Two calls convert the model in both directions, each validates its result (libcellml for the CellML model, libsbml for the SBML model). The first one writes `repressilator.rdf` next to `repressilator.cellml`, the second one reads it:

```python
from pathlib import Path

from sbml2cellml import convert_cellml2sbml, convert_sbml2cellml

sbml_path = Path("repressilator.xml")
cellml_path = Path("repressilator.cellml")
roundtrip_path = Path("repressilator_roundtrip.xml")

convert_sbml2cellml(sbml_path, cellml_path=cellml_path)
convert_cellml2sbml(cellml_path, sbml_path=roundtrip_path)
```

The command line does the same:

```bash
sbml2cellml repressilator.xml -o repressilator.cellml
cellml2sbml repressilator.cellml -o repressilator_roundtrip.xml
```

## The models

=== "1 SBML"

    The six species (three mRNAs, three proteins) are amounts in the compartment `cell`, twelve reactions transcribe, translate and degrade them. Assignment rules compute the rate constants from the half lifes and the promoter strengths. The model, the species and the reactions have names, notes, SBO terms and annotations.

    ```{ .xml .listing title="examples/models/repressilator.xml" }
    --8<-- "examples/models/repressilator.xml"
    ```

=== "2 CellML"

    One component `sbml` with a variable for the compartment, every parameter, every species and the rate of every reaction, and the variable of integration `time`. The assignment rules and the kinetic laws are equations, the rates of its reactions the differential equation of a species. Every element has an `id`, which the metadata points at.

    The variables are `dimensionless`: the parameters of the SBML model have no units, and the units are only converted when the annotation is complete, see [Units](conversion.md#units).

    ```{ .xml .listing title="repressilator.cellml" }
    --8<-- "docs/roundtrip/repressilator.cellml"
    ```

=== "2 RDF"

    The names (`dcterms:title`), notes (`dcterms:description`), SBO terms (the first `bqbiol:is`), annotations and the history of the SBML elements, with `repressilator.cellml#<id>` as subject. The RDF is the one of the SBML annotations, in the form of SBML level 3.

    ```{ .xml .listing title="repressilator.rdf" }
    --8<-- "docs/roundtrip/repressilator.rdf"
    ```

=== "3 SBML of the roundtrip"

    CellML has neither compartments nor species: every variable comes back as a parameter, the differential equations as rate rules, the equations as assignment rules, or as initial assignments when they compute a constant, see [CellML to SBML](conversion.md#mapping). The mathematics is the one of the first model, its biological structure is not. The metadata is back: a species is a parameter, but with its name, its notes, its SBO term and its annotations, and the model has its history.

    ```{ .xml .listing title="repressilator_roundtrip.xml" }
    --8<-- "docs/roundtrip/repressilator_roundtrip.xml"
    ```

## Simulate

roadrunner and libopencor cannot run in one python process, see [Simulation](simulation.md#setup). The example therefore simulates the SBML models with a script of its own, which writes the timecourse to a CSV file:

```{ .python .listing title="examples/roadrunner_timecourse.py" }
--8<-- "examples/roadrunner_timecourse.py"
```

The CellML model is simulated in the process of the example:

```python
from sbml2cellml.simulate import run_timecourse

df, units = run_timecourse(cellml_path, start=0.0, end=600.0, steps=600)
```

The three simulations of the proteins over 600 minutes, side by side:

![Timecourses of the proteins LacI, TetR and cI: SBML with roadrunner, CellML with libopencor, SBML of the roundtrip with roadrunner](images/repressilator.svg#only-light)
![Timecourses of the proteins LacI, TetR and cI: SBML with roadrunner, CellML with libopencor, SBML of the roundtrip with roadrunner](images/repressilator_dark.svg#only-dark)

The simulations agree within the tolerances of the integrators (both CVODE with the default tolerances of the simulator). The largest difference to the first simulation over all time points, with protein numbers of up to 2400 molecules per cell:

--8<-- "docs/roundtrip/repressilator_differences.md"

The [SBML test suite](testsuite.md) and the [BioModels](biomodels.md) check run this pipeline for every model and compare the numbers with tolerances.

## The complete example

??? example "examples/repressilator_example.py"

    ```{ .python .listing }
    --8<-- "examples/repressilator_example.py"
    ```

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/conversion-issues.md -->

# Conversion issues

The remaining issues of the conversion, i.e., what the current version does not convert or converts with a loss. The failure reasons of the [SBML test suite](testsuite.md#failure-reasons) measure them against the semantic test cases; what is converted is listed in [What is converted](index.md#what-is-converted) and [CellML to SBML](conversion.md#mapping).

## SBML to CellML

- **Units of an incomplete annotation.** The units of the variables are converted when every variable has units in the SBML model, see [Units](conversion.md#units); with a single compartment, species or parameter without units every variable stays `dimensionless`. A number without units in a formula is always `dimensionless`, CellML requires units on every number and SBML has none to give.
- **Unit warnings of libcellml.** The CellML specification applies the exponent of a unit to its prefix but not to its multiplier, which `libcellml.Units.scalingFactor` follows and the converter writes. The unit check of the libcellml 0.7.1 analyser applies the exponent to the multiplier as well, so it warns about equations with units such as `per_min` (`(60 second)^-1` in SBML, `1/60 second^-1` in CellML) which are consistent ([cellml/libcellml#1463](https://github.com/cellml/libcellml/issues/1463)). The warnings do not make a model invalid.
- **Initial assignments** are evaluated to initial values (libsbml's `expandInitialAssignments`), so the CellML model has the value but not the formula. An assignment which libsbml cannot evaluate (a call of a recursive function definition, a rateOf with a local parameter, a delay, or the value of such an assignment) stays unconverted with a warning. libsbml takes only 1 as true when it evaluates a number as a condition (`piecewise(0, 5, 1)` gives 1, test case 01282).
- **An infinite or NaN initial value of a state** cannot be expressed: CellML initial values are real numbers (a constant gets the equation `x = INF` instead).
- **Metadata without a CellML element**: the names, notes and annotations of rules, function definitions, initial assignments, constraints and events are not converted, neither are annotations which are not RDF (e.g., of COPASI or layout tools). Everything else goes into the RDF file next to the CellML model, see [Metadata](conversion.md#metadata).
- **Events** are skipped with a warning. CellML 2.0 has no events; a subset could be expressed with resets.
- **Coupled algebraic rules**, which determine their variables only together (`x + y = 4`, `x - y = 2`), cannot be analysed by libcellml; an algebraic rule which determines no variable is skipped with a warning.
- **stoichiometryMath** of level 2 species references is not converted, the stoichiometry attribute is used.
- **N-ary relations** such as `a > b > c` are not split into binary ones; CellML only has binary relations.
- **Time without differential equations.** CellML knows the variable of integration only from a differential equation: a model without one has no `time` variable, and a formula using time in such a model cannot be converted.
- **An SBML id `time`** collides with the variable of integration `time` of the CellML model and with the time column of the simulation results.
- **The delay symbol** is not converted, CellML has no delays.
- **rateOf** of a variable whose rate depends on itself, or which an assignment rule sets, is not converted; in an initial assignment neither when the rate has a local parameter. The rate of a concentration in a compartment which changes needs the rate of the compartment, so it is converted when a rate rule changes the compartment and not when an assignment or algebraic rule does.
- **Unset initial values** of variables which no assignment rule or initial assignment sets are `1.0`, with a warning.

## CellML to SBML

- **External variables** are not supported and raise `CellML2SBMLConversionError`; a system of coupled implicit equations cannot be analysed by libcellml.
- **New base units** (units without a unit) have no SBML counterpart and are `dimensionless` in SBML, with a warning; only new base units named `item` become the SBML unit kind.
- **Resets** trigger on the equality of the test variable and the test value; a continuous simulator may not fire this trigger, see the [limitations](conversion.md#limitations).

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/testsuite.md -->

<!-- generated by sbml2cellml-testsuite, do not edit -->
# SBML test suite

Semantic test cases of the [SBML test suite](https://github.com/sbmlteam/sbml-test-suite) 3.5.0. Every case is simulated with roadrunner (`roadrunner`), converted to CellML (`sbml2cellml`), simulated with libopencor (`libopencor`), converted back to SBML (`cellml2sbml`) and simulated with roadrunner again (`roundtrip`). See [Development](development.md#sbml-test-suite) for how to run it.

Every simulation is compared with the expected results of the case: a value passes when `|value - expected| <= absolute + relative * |expected|` with the absolute and the relative tolerance of the settings of the case. Both simulators integrate with CVODE with tight tolerances (relative/absolute `1e-9`/`1e-12`) and up to 100000 internal steps between two time points, so the comparison measures the conversion and not the integrator; only when CVODE gives up with these tolerances the simulation is repeated with `1e-8`/`1e-10` and `1e-7`/`1e-9`.

A `roadrunner` failure means roadrunner itself cannot simulate the case (algebraic rules, delays), it says nothing about the converters.

## Summary

1535 cases run, 288 skipped.

![Cases which pass, fail and skip the stages](images/testsuite.svg#only-light)
![Cases which pass, fail and skip the stages](images/testsuite_dark.svg#only-dark)

| stage | total | pass | fail | skip | pass rate |
| --- | --- | --- | --- | --- | --- |
| roadrunner | 1535 | 1384 | 151 | 0 | 90.2% |
| sbml2cellml | 1535 | 1464 | 71 | 0 | 95.4% |
| libopencor | 1535 | 1044 | 420 | 71 | 68.0% |
| cellml2sbml | 1535 | 1464 | 0 | 71 | 95.4% |
| roundtrip | 1535 | 962 | 502 | 71 | 62.7% |

939 of the 1044 cases with a passing libopencor stage are informative: the expected results move more than the tolerance band for at least one variable.

## Failure reasons

The cases which fail a stage, grouped by their error: errors which differ only in quoted text, numbers and, for the validation of a CellML model, the issues after the first one are one group. Every case is listed with its complete error.

### roadrunner

151 of 1535 cases fail.

**101 cases**

```text
00039: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * k1 + S1 + S2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00040: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * k2 + S1 + S2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00182: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * k1 + S1 + S2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00184: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = add(S1, add(S2, -1 * k1))' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00531: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 - T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00532: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * S1 + T + X0 + X1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00533: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = k2 + -0.9' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00534: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = k2 + -1 * k3 + -0.2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00535: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = S4 + -1 * S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00536: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = k1 + -0.1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00537: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = k2 + -0.2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00538: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = k2 + -0.25' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00539: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = C + -1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00540: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = C + -1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00541: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = C + -1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00542: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = C + -1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00543: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00544: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = C + -1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00545: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = C + -1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00546: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = S4 + -1 * S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00547: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = C + -2.5' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00548: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = C + -0.75' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00549: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00550: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00551: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00552: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = S4 + -1 * S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00553: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = S4 + -1 * S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00554: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = S4 + -1 * S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00555: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + S2 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00556: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * S1 + S4 + -1 * S5' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00557: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00558: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00559: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = S4 + -1 * S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00560: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = S4 + -1 * S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00565: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00566: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = S4 + -1 * S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00567: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = multiply(k3 + 1, S1) + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00568: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * S1 + T + add(X0, X1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00569: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = subtract(k2, 0.9)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00570: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = subtract(k2, k3) + -0.2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00571: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = subtract(multiply(k3 + 1, S1), T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00572: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = add(add(X0, X1), T) + -1 * S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00573: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * p4 + -1 * p3' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00574: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = p1 + p2 + p3 + -1 * p4' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00575: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = k2 + -0.9' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00576: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = p4 + -1 * p1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00613: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00614: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00615: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00628: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00629: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00630: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00658: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * k1 + S1 + S2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00659: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * k1 + S1 + S2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00660: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * k1 + S1 + S2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00661: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * S1 + T + X0 + X1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00662: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00663: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = k2 + -0.9' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00664: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = k2 + -0.9' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00665: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * S1 + T + X0 + X1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00666: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00673: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00674: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00675: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00687: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00695: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00696: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00705: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00760: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * S1 + T + add(X0, X1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00761: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = S1 * add(1, k3) + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00762: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = subtract(k2, 0.9)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00777: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = k2 + -2.5' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00778: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * S1 + T + X0 + X1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00779: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * S1 + T + X0 + X1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00780: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = -1 * S1 + T + X0 + X1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00844: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = kf + -0.75' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00876: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = S4 + -1 * S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00983: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula ' 2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01044: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = kf + -0.75' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01054: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = S4 + -1 * S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01083: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01084: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = (k3 + 1) * S1 + -1 * T' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01085: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = S4 + -1 * S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01086: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = S4 + -1 * S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01108: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = X - p1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01292: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = p1 - true' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01479: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula ' 1e23 - P1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01482: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = rateOf(S1) - P1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01483: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = rateOf(S1) - P1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01484: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = P1 - S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01499: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = P0 - S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01500: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = P0 - S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01501: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = P0 - S1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01502: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = P2 - abs(-1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01503: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = P1 - plus()' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01575: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = k1 - k2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01576: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = k1 - k2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01577: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 10 - k1 - k2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01578: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 10 - k1' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01579: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = k1 - k2' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01589: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = Q + R - S' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
```

**47 cases**

```text
00937: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(x, 0.2)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
00938: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(x, 0.2)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
00939: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(x, 0.2)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
00940: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(x, 0.5)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
00941: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(x, 0.5)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
00942: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(x, 0.5)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
00943: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(x, 0.5)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
00981: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function ' 2)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
00982: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(x, temp)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
00984: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(x, temp)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
00985: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(x, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01318: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(p2, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01319: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(p2, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01320: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01400: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(rateOf(S1), 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01401: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(rateOf(S1), 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01403: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(rateOf(S1), 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01404: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01406: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(rateOf(S1), 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01407: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01409: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(rateOf(S1), 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01410: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01411: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(addtwo(S1, S2), 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01412: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(addtwo(S1, S2), 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01413: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1, addtwo(0.5, 0.5))' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01414: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(P1, k)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01415: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(P1, k)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01416: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01417: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1, S1_stoich)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01418: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1_stoich, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01419: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1_stoich, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01454: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1, 0.1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01480: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01518: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(P1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01519: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(P1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01520: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(P1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01521: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(P1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01522: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(P1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01523: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(P1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01524: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(P1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01534: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01535: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01536: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(P1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01537: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01538: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(S1, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01592: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(reset, 0.005)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
01593: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(Q, 1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
```

**2 cases**

```text
01820: duplicate column names
01821: duplicate column names
```

**1 case, numerical mismatch**

```text
01511: S1 exceeds the tolerance by 0.0139; x exceeds the tolerance by 0.0199
```

The test tags of the cases with a numerical mismatch:

| tags | cases | ids |
| --- | --- | --- |
| Amount, BoundaryCondition, EventIsPersistent, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, VolumeConcentrationRates | 1 | 01511 |

### sbml2cellml

71 of 1535 cases fail.

**48 cases**

```text
00028: CellMLValidationError: CellML model 'case00028' converted from '00028-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'factorial' element that is not a supported MathML element.
    [ERROR] Math has a 'factorial' element that is not a supported MathML element.
00173: CellMLValidationError: CellML model 'case00173' converted from '00173-sbml-l3v2.xml' has 4 errors:
    [ERROR] Math has a 'factorial' element that is not a supported MathML element.
    [ERROR] Math has a 'factorial' element that is not a supported MathML element.
    [ERROR] Math has a 'factorial' element that is not a supported MathML element.
    [ERROR] Math has a 'factorial' element that is not a supported MathML element.
00269: CellMLValidationError: CellML model 'case00269' converted from '00269-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'factorial' element that is not a supported MathML element.
    [ERROR] Math has a 'factorial' element that is not a supported MathML element.
00937: CellMLValidationError: CellML model 'case00937' converted from '00937-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
00938: CellMLValidationError: CellML model 'case00938' converted from '00938-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
00939: CellMLValidationError: CellML model 'case00939' converted from '00939-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
00940: CellMLValidationError: CellML model 'case00940' converted from '00940-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
00941: CellMLValidationError: CellML model 'case00941' converted from '00941-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
00942: CellMLValidationError: CellML model 'case00942' converted from '00942-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
00943: CellMLValidationError: CellML model 'case00943' converted from '00943-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
00957: CellMLValidationError: CellML model 'case000957' converted from '00957-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'factorial' element that is not a supported MathML element.
    [ERROR] Math has a 'factorial' element that is not a supported MathML element.
00981: CellMLValidationError: CellML model 'case00981' converted from '00981-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
00982: CellMLValidationError: CellML model 'case00982' converted from '00982-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
00983: CellMLValidationError: CellML model 'case00983' converted from '00983-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
00984: CellMLValidationError: CellML model 'case00984' converted from '00984-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
00985: CellMLValidationError: CellML model 'case00985' converted from '00985-sbml-l3v2.xml' has 4 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01277: CellMLValidationError: CellML model 'case01277' converted from '01277-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'quotient' element that is not a supported MathML element.
    [ERROR] Math has a 'quotient' element that is not a supported MathML element.
01279: CellMLValidationError: CellML model 'case01279' converted from '01279-sbml-l3v2.xml' has 8 errors:
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
01318: CellMLValidationError: CellML model 'case01318' converted from '01318-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01319: CellMLValidationError: CellML model 'case01319' converted from '01319-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01320: CellMLValidationError: CellML model 'case01320' converted from '01320-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01400: CellMLValidationError: CellML model 'case01400' converted from '01400-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01401: CellMLValidationError: CellML model 'case01401' converted from '01401-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01403: CellMLValidationError: CellML model 'case01403' converted from '01403-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01404: CellMLValidationError: CellML model 'case01404' converted from '01404-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01406: CellMLValidationError: CellML model 'case01406' converted from '01406-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01407: CellMLValidationError: CellML model 'case01407' converted from '01407-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01409: CellMLValidationError: CellML model 'case01409' converted from '01409-sbml-l3v2.xml' has 4 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01410: CellMLValidationError: CellML model 'case01410' converted from '01410-sbml-l3v2.xml' has 4 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01411: CellMLValidationError: CellML model 'case01411' converted from '01411-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01412: CellMLValidationError: CellML model 'case01412' converted from '01412-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01413: CellMLValidationError: CellML model 'case01413' converted from '01413-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01414: CellMLValidationError: CellML model 'case01414' converted from '01414-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01415: CellMLValidationError: CellML model 'case01415' converted from '01415-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01416: CellMLValidationError: CellML model 'case01416' converted from '01416-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01417: CellMLValidationError: CellML model 'case01417' converted from '01417-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01418: CellMLValidationError: CellML model 'case01418' converted from '01418-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01419: CellMLValidationError: CellML model 'case01419' converted from '01419-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01454: CellMLValidationError: CellML model 'case01454' converted from '01454-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01480: CellMLValidationError: CellML model 'case01480' converted from '01480-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01486: CellMLValidationError: CellML model 'case01486' converted from '01486-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'factorial' element that is not a supported MathML element.
    [ERROR] Math has a 'factorial' element that is not a supported MathML element.
01495: CellMLValidationError: CellML model 'case01495' converted from '01495-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'quotient' element that is not a supported MathML element.
    [ERROR] Math has a 'quotient' element that is not a supported MathML element.
01497: CellMLValidationError: CellML model 'case01497' converted from '01497-sbml-l3v2.xml' has 8 errors:
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
    [ERROR] Math has a 'implies' element that is not a supported MathML element.
01534: CellMLValidationError: CellML model 'case01534' converted from '01534-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01535: CellMLValidationError: CellML model 'case01535' converted from '01535-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01537: CellMLValidationError: CellML model 'case01537' converted from '01537-sbml-l3v2.xml' has 4 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01538: CellMLValidationError: CellML model 'case01538' converted from '01538-sbml-l3v2.xml' has 4 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
01593: CellMLValidationError: CellML model 'case01593' converted from '01593-sbml-l3v2.xml' has 4 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
```

**18 cases**

```text
00936: CellMLValidationError: CellML model 'case00936' converted from '00936-sbml-l3v2.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'S1' in component 'sbml' is unknown.
00955: CellMLValidationError: CellML model 'case000955' converted from '00955-sbml-l3v2.xml' has 36 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P1' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P2' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P3' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P4' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P5' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P6' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P7' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P8' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P9' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P10' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P11' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P13' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P14' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P15' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P16' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P18' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P19' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P20' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P22' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P24' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P25' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P26' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P29' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P31' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P32' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P34' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P35' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P37' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P38' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P39' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P40' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P41' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P42' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P43' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P44' in component 'sbml' is unknown.
00959: CellMLValidationError: CellML model 'case000959' converted from '00959-sbml-l3v2.xml' has 27 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P26' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P25' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P24' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P23' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P22' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P21' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P20' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P19' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P18' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P17' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P16' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P15' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P14' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P13' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P12' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P11' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P10' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P9' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P8' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P7' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P6' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P5' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P4' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P3' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P2' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P1' in component 'sbml' is unknown.
01278: CellMLValidationError: CellML model 'case01278' converted from '01278-sbml-l3v2.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'p1' in component 'sbml' is unknown.
01280: CellMLValidationError: CellML model 'case01280' converted from '01280-sbml-l3v2.xml' has 4 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'p1' in component 'sbml' is unknown.
    [ERROR] The type of variable 'p2' in component 'sbml' is unknown.
    [ERROR] The type of variable 'p3' in component 'sbml' is unknown.
01281: CellMLValidationError: CellML model 'case01281' converted from '01281-sbml-l3v2.xml' has 4 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'p1' in component 'sbml' is unknown.
    [ERROR] The type of variable 'p2' in component 'sbml' is unknown.
    [ERROR] The type of variable 'p3' in component 'sbml' is unknown.
01306: CellMLValidationError: CellML model 'case01306' converted from '01306-sbml-l3v2.xml' has 3 errors:
    [ERROR] The type of variable 'J0' in component 'sbml' is unknown.
    [ERROR] The type of variable 'p1' in component 'sbml' is unknown.
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
01317: CellMLValidationError: CellML model 'case01317' converted from '01317-sbml-l3v2.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'p2' in component 'sbml' is unknown.
01343: CellMLValidationError: CellML model 'case01343' converted from '01343-sbml-l3v2.xml' has 3 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P3' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P4' in component 'sbml' is unknown.
01487: CellMLValidationError: CellML model 'case01487' converted from '01487-sbml-l3v2.xml' has 27 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P1' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P2' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P3' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P4' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P5' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P6' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P7' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P8' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P9' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P10' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P11' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P13' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P14' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P15' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P16' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P18' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P19' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P20' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P22' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P29' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P31' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P32' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P34' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P35' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P36' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P37' in component 'sbml' is unknown.
01488: CellMLValidationError: CellML model 'case01488' converted from '01488-sbml-l3v2.xml' has 27 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P1' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P2' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P3' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P4' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P5' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P6' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P7' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P8' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P9' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P10' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P11' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P12' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P13' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P14' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P15' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P16' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P17' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P18' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P19' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P20' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P21' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P22' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P23' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P24' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P25' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P26' in component 'sbml' is unknown.
01496: CellMLValidationError: CellML model 'case01496' converted from '01496-sbml-l3v2.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'p1' in component 'sbml' is unknown.
01522: CellMLValidationError: CellML model 'case01522' converted from '01522-sbml-l3v2.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P1' in component 'sbml' is unknown.
01594: CellMLValidationError: CellML model 'case01594' converted from '01594-sbml-l3v2.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P1' in component 'sbml' is unknown.
01595: CellMLValidationError: CellML model 'case01595' converted from '01595-sbml-l3v2.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P1' in component 'sbml' is unknown.
01596: CellMLValidationError: CellML model 'case01596' converted from '01596-sbml-l3v2.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P1' in component 'sbml' is unknown.
01597: CellMLValidationError: CellML model 'case01597' converted from '01597-sbml-l3v2.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P1' in component 'sbml' is unknown.
01598: CellMLValidationError: CellML model 'case01598' converted from '01598-sbml-l3v2.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'P1' in component 'sbml' is unknown.
```

**5 cases**

```text
01210: CellMLValidationError: CellML model 'case01210' converted from '01210-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'gt' element without exactly two MathML siblings.
    [ERROR] Math has a 'gt' element without exactly two MathML siblings.
01215: CellMLValidationError: CellML model 'case01215' converted from '01215-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'gt' element without exactly two MathML siblings.
    [ERROR] Math has a 'gt' element without exactly two MathML siblings.
01216: CellMLValidationError: CellML model 'case01216' converted from '01216-sbml-l3v2.xml' has 20 errors:
    [ERROR] Math has a 'gt' element without exactly two MathML siblings.
    [ERROR] Math has a 'lt' element without exactly two MathML siblings.
    [ERROR] Math has a 'geq' element without exactly two MathML siblings.
    [ERROR] Math has a 'leq' element without exactly two MathML siblings.
    [ERROR] Math has a 'eq' element without exactly two MathML siblings.
    [ERROR] Math has a 'gt' element without exactly two MathML siblings.
    [ERROR] Math has a 'lt' element without exactly two MathML siblings.
    [ERROR] Math has a 'geq' element without exactly two MathML siblings.
    [ERROR] Math has a 'leq' element without exactly two MathML siblings.
    [ERROR] Math has a 'eq' element without exactly two MathML siblings.
    [ERROR] Math has a 'gt' element without exactly two MathML siblings.
    [ERROR] Math has a 'lt' element without exactly two MathML siblings.
    [ERROR] Math has a 'geq' element without exactly two MathML siblings.
    [ERROR] Math has a 'leq' element without exactly two MathML siblings.
    [ERROR] Math has a 'eq' element without exactly two MathML siblings.
    [ERROR] Math has a 'gt' element without exactly two MathML siblings.
    [ERROR] Math has a 'lt' element without exactly two MathML siblings.
    [ERROR] Math has a 'geq' element without exactly two MathML siblings.
    [ERROR] Math has a 'leq' element without exactly two MathML siblings.
    [ERROR] Math has a 'eq' element without exactly two MathML siblings.
01782: CellMLValidationError: CellML model 'case01782' converted from '01782-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'gt' element without exactly two MathML siblings.
    [ERROR] Math has a 'gt' element without exactly two MathML siblings.
01783: CellMLValidationError: CellML model 'case01783' converted from '01783-sbml-l3v2.xml' has 2 errors:
    [ERROR] Math has a 'gt' element without exactly two MathML siblings.
    [ERROR] Math has a 'gt' element without exactly two MathML siblings.
```

### libopencor

420 of 1535 cases fail.

**418 cases, numerical mismatch**

```text
00026: S1 exceeds the tolerance by 0.9; S2 exceeds the tolerance by 1.13
00041: S1 exceeds the tolerance by 0.9; S2 exceeds the tolerance by 0.937
00071: S1 exceeds the tolerance by 0.873; S2 exceeds the tolerance by 0.786
00072: S1 exceeds the tolerance by 0.873; S2 exceeds the tolerance by 0.968
00073: S1 exceeds the tolerance by 0.873; S2 exceeds the tolerance by 0.873
00074: S1 exceeds the tolerance by 0.899; S2 exceeds the tolerance by 0.899
00172: S1 exceeds the tolerance by 0.899; S2 exceeds the tolerance by 1.13
00348: S1 exceeds the tolerance by 0.183; S2 exceeds the tolerance by 0.745; S3 exceeds the tolerance by 0.183
00349: S1 exceeds the tolerance by 0.578; S2 exceeds the tolerance by 0.745; S3 exceeds the tolerance by 0.179
00350: S1 exceeds the tolerance by 0.578; S2 exceeds the tolerance by 0.29; S3 exceeds the tolerance by 0.607
00351: S1 exceeds the tolerance by 0.00108; S2 exceeds the tolerance by 0.00029; S3 exceeds the tolerance by 0.00029; S4 exceeds the tolerance by 0.00029
00352: S1 exceeds the tolerance by 0.0108; S2 exceeds the tolerance by 0.00347; S3 exceeds the tolerance by 0.00347; S4 exceeds the tolerance by 0.00119
00353: S1 exceeds the tolerance by 0.115; S2 exceeds the tolerance by 0.0431; S3 exceeds the tolerance by 0.0431; S4 exceeds the tolerance by 0.065
00354: S1 exceeds the tolerance by 0.0912; S2 exceeds the tolerance by 0.496; S3 exceeds the tolerance by 0.0911
00355: S1 exceeds the tolerance by 0.0595; S2 exceeds the tolerance by 0.297; S3 exceeds the tolerance by 0.0593
00356: S1 exceeds the tolerance by 0.194; S2 exceeds the tolerance by 0.61; S3 exceeds the tolerance by 0.0599
00357: S1 exceeds the tolerance by 0.194; S2 exceeds the tolerance by 0.424; S3 exceeds the tolerance by 0.055
00358: S1 exceeds the tolerance by 0.552; S2 exceeds the tolerance by 0.284; S3 exceeds the tolerance by 0.59
00359: S1 exceeds the tolerance by 0.576; S2 exceeds the tolerance by 0.299; S3 exceeds the tolerance by 0.456
00360: S1 exceeds the tolerance by 0.132; S2 exceeds the tolerance by 0.692; S3 exceeds the tolerance by 0.132
00361: S1 exceeds the tolerance by 0.0127; S2 exceeds the tolerance by 0.0986; S3 exceeds the tolerance by 0.0126
00362: S1 exceeds the tolerance by 0.0802; S2 exceeds the tolerance by 0.444; S3 exceeds the tolerance by 0.0801
00363: S1 exceeds the tolerance by 0.571; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.179
00364: S1 exceeds the tolerance by 0.194; S2 exceeds the tolerance by 0.531; S3 exceeds the tolerance by 0.0823
00365: S1 exceeds the tolerance by 0.158; S2 exceeds the tolerance by 0.596; S3 exceeds the tolerance by 0.0466
00366: S1 exceeds the tolerance by 0.493; S2 exceeds the tolerance by 0.467; S3 exceeds the tolerance by 0.217
00367: S1 exceeds the tolerance by 0.145; S2 exceeds the tolerance by 0.248; S3 exceeds the tolerance by 0.0478
00368: S1 exceeds the tolerance by 0.234; S2 exceeds the tolerance by 0.484; S3 exceeds the tolerance by 0.251
00369: S1 exceeds the tolerance by 0.169; S2 exceeds the tolerance by 0.934; S3 exceeds the tolerance by 0.169
00370: S1 exceeds the tolerance by 0.911; S2 exceeds the tolerance by 0.365; S3 exceeds the tolerance by 0.08
00371: S1 exceeds the tolerance by 0.498; S2 exceeds the tolerance by 0.349; S3 exceeds the tolerance by 0.321
00372: S1 exceeds the tolerance by 0.0008; S2 exceeds the tolerance by 0.00022; S3 exceeds the tolerance by 0.00022; S4 exceeds the tolerance by 0.00022
00373: S1 exceeds the tolerance by 0.0415; S2 exceeds the tolerance by 0.0222; S3 exceeds the tolerance by 0.0222; S4 exceeds the tolerance by 0.186
00374: S1 exceeds the tolerance by 0.000156; S2 exceeds the tolerance by 8.59e-05; S3 exceeds the tolerance by 8.58e-05; S4 exceeds the tolerance by 0.000464
00375: S1 exceeds the tolerance by 0.235; S2 exceeds the tolerance by 0.999; S3 exceeds the tolerance by 0.235
00376: S1 exceeds the tolerance by 0.205; S2 exceeds the tolerance by 0.733
00377: S1 exceeds the tolerance by 0.205; S2 exceeds the tolerance by 0.899
00378: S1 exceeds the tolerance by 0.611; S2 exceeds the tolerance by 0.999; S3 exceeds the tolerance by 0.218
00379: S1 exceeds the tolerance by 0.205; S2 exceeds the tolerance by 0.733
00380: S1 exceeds the tolerance by 0.205; S2 exceeds the tolerance by 0.899
00381: S1 exceeds the tolerance by 0.478; S2 exceeds the tolerance by 0.499; S3 exceeds the tolerance by 0.119
00382: S1 exceeds the tolerance by 0.455; S2 exceeds the tolerance by 0.289
00383: S1 exceeds the tolerance by 0.618; S2 exceeds the tolerance by 0.499
00384: S1 exceeds the tolerance by 0.000114; S2 exceeds the tolerance by 4.04e-05; S3 exceeds the tolerance by 4.04e-05
00385: S1 exceeds the tolerance by 0.00111; S2 exceeds the tolerance by 0.000532; S3 exceeds the tolerance by 0.000989
00386: S1 exceeds the tolerance by 0.0116; S2 exceeds the tolerance by 0.00584; S3 exceeds the tolerance by 0.0166
00387: S1 exceeds the tolerance by 0.112; S2 exceeds the tolerance by 0.393; S3 exceeds the tolerance by 0.112
00389: S1 exceeds the tolerance by 0.187; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.186
00390: S1 exceeds the tolerance by 0.106; S2 exceeds the tolerance by 0.0314; S3 exceeds the tolerance by 0.0629; S4 exceeds the tolerance by 0.0126
00392: S1 exceeds the tolerance by 0.00108; S2 exceeds the tolerance by 0.000347; S3 exceeds the tolerance by 0.000347; S4 exceeds the tolerance by 0.000119
00393: S1 exceeds the tolerance by 0.371; S2 exceeds the tolerance by 0.743; S3 exceeds the tolerance by 0.245
00395: S1 exceeds the tolerance by 0.448; S2 exceeds the tolerance by 0.293; S3 exceeds the tolerance by 0.137
00396: S1 exceeds the tolerance by 0.148; S2 exceeds the tolerance by 0.745; S3 exceeds the tolerance by 0.148
00397: S1 exceeds the tolerance by 0.571; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.179
00398: S1 exceeds the tolerance by 0.578; S2 exceeds the tolerance by 0.29; S3 exceeds the tolerance by 0.607
00399: S1 exceeds the tolerance by 0.971; S2 exceeds the tolerance by 0.666; S3 exceeds the tolerance by 0.416
00400: S1 exceeds the tolerance by 0.943; S2 exceeds the tolerance by 0.327; S3 exceeds the tolerance by 0.143
00401: S1 exceeds the tolerance by 0.94; S2 exceeds the tolerance by 0.261; S3 exceeds the tolerance by 0.796
00402: S1 exceeds the tolerance by 0.971; S2 exceeds the tolerance by 0.666; S3 exceeds the tolerance by 0.416
00403: S1 exceeds the tolerance by 0.943; S2 exceeds the tolerance by 0.327; S3 exceeds the tolerance by 0.143
00404: S1 exceeds the tolerance by 0.94; S2 exceeds the tolerance by 0.261; S3 exceeds the tolerance by 0.796
00405: S1 exceeds the tolerance by 0.0835; S2 exceeds the tolerance by 0.448; S3 exceeds the tolerance by 0.0834
00406: S1 exceeds the tolerance by 0.442; S2 exceeds the tolerance by 0.478; S3 exceeds the tolerance by 0.215
00407: S1 exceeds the tolerance by 0.565; S2 exceeds the tolerance by 0.26; S3 exceeds the tolerance by 0.359
00408: S1 exceeds the tolerance by 0.000116; S2 exceeds the tolerance by 3e-05; S3 exceeds the tolerance by 3e-05; S4 exceeds the tolerance by 3e-05
00409: S1 exceeds the tolerance by 0.00113; S2 exceeds the tolerance by 0.000401; S3 exceeds the tolerance by 0.0004; S4 exceeds the tolerance by 0.000276
00410: S1 exceeds the tolerance by 0.0112; S2 exceeds the tolerance by 0.00453; S3 exceeds the tolerance by 0.00453; S4 exceeds the tolerance by 0.00616
00411: S1 exceeds the tolerance by 0.0943; S2 exceeds the tolerance by 0.428; S3 exceeds the tolerance by 0.0942
00412: S1 exceeds the tolerance by 0.0328; S2 exceeds the tolerance by 0.185; S3 exceeds the tolerance by 0.0327
00413: S1 exceeds the tolerance by 0.553; S2 exceeds the tolerance by 0.672; S3 exceeds the tolerance by 0.129
00414: S1 exceeds the tolerance by 0.52; S2 exceeds the tolerance by 0.479; S3 exceeds the tolerance by 0.328
00415: S1 exceeds the tolerance by 0.557; S2 exceeds the tolerance by 0.266; S3 exceeds the tolerance by 0.444
00416: S1 exceeds the tolerance by 0.582; S2 exceeds the tolerance by 0.274; S3 exceeds the tolerance by 0.379
00417: S1 exceeds the tolerance by 0.0652; S2 exceeds the tolerance by 0.365; S3 exceeds the tolerance by 0.0651
00418: S1 exceeds the tolerance by 0.0235; S2 exceeds the tolerance by 0.168; S3 exceeds the tolerance by 0.0233
00419: S1 exceeds the tolerance by 0.0423; S2 exceeds the tolerance by 0.223; S3 exceeds the tolerance by 0.0422
00420: S1 exceeds the tolerance by 0.562; S2 exceeds the tolerance by 0.589; S3 exceeds the tolerance by 0.0895
00421: S1 exceeds the tolerance by 0.404; S2 exceeds the tolerance by 0.465; S3 exceeds the tolerance by 0.165
00422: S1 exceeds the tolerance by 0.497; S2 exceeds the tolerance by 0.562; S3 exceeds the tolerance by 0.0944
00423: S1 exceeds the tolerance by 0.562; S2 exceeds the tolerance by 0.451; S3 exceeds the tolerance by 0.291
00424: S1 exceeds the tolerance by 0.202; S2 exceeds the tolerance by 0.227; S3 exceeds the tolerance by 0.0883
00425: S1 exceeds the tolerance by 0.107; S2 exceeds the tolerance by 0.177; S3 exceeds the tolerance by 0.0364
00426: S1 exceeds the tolerance by 0.163; S2 exceeds the tolerance by 0.926; S3 exceeds the tolerance by 0.162
00427: S1 exceeds the tolerance by 0.922; S2 exceeds the tolerance by 0.526; S3 exceeds the tolerance by 0.388
00428: S1 exceeds the tolerance by 0.51; S2 exceeds the tolerance by 0.338; S3 exceeds the tolerance by 0.483
00429: S1 exceeds the tolerance by 0.00317; S2 exceeds the tolerance by 0.0013; S3 exceeds the tolerance by 0.0013; S4 exceeds the tolerance by 0.0013
00430: S1 exceeds the tolerance by 0.000601; S2 exceeds the tolerance by 0.000255; S3 exceeds the tolerance by 0.000255; S4 exceeds the tolerance by 0.00106
00431: S1 exceeds the tolerance by 0.0522; S2 exceeds the tolerance by 0.0195; S3 exceeds the tolerance by 0.0194; S4 exceeds the tolerance by 0.104
00432: S1 exceeds the tolerance by 0.206; S2 exceeds the tolerance by 0.999; S3 exceeds the tolerance by 0.206
00433: S1 exceeds the tolerance by 0.055; S2 exceeds the tolerance by 0.29
00434: S1 exceeds the tolerance by 0.0917; S2 exceeds the tolerance by 0.899
00435: S1 exceeds the tolerance by 0.671; S2 exceeds the tolerance by 0.999; S3 exceeds the tolerance by 0.169
00436: S1 exceeds the tolerance by 0.0514; S2 exceeds the tolerance by 0.282
00437: S1 exceeds the tolerance by 0.0758; S2 exceeds the tolerance by 0.899
00438: S1 exceeds the tolerance by 0.681; S2 exceeds the tolerance by 0.499; S3 exceeds the tolerance by 0.982
00439: S1 exceeds the tolerance by 0.656; S2 exceeds the tolerance by 0.267
00440: S1 exceeds the tolerance by 0.763; S2 exceeds the tolerance by 0.499
00441: S1 exceeds the tolerance by 0.116; S2 exceeds the tolerance by 0.0407; S3 exceeds the tolerance by 0.0407
00442: S1 exceeds the tolerance by 0.000115; S2 exceeds the tolerance by 5.81e-05; S3 exceeds the tolerance by 0.000111
00443: S1 exceeds the tolerance by 0.00119; S2 exceeds the tolerance by 0.000666; S3 exceeds the tolerance by 0.00169
00444: S1 exceeds the tolerance by 0.0481; S2 exceeds the tolerance by 0.441; S3 exceeds the tolerance by 0.048
00446: S1 exceeds the tolerance by 0.08; S2 exceeds the tolerance by 0.389; S3 exceeds the tolerance by 0.0799
00447: S1 exceeds the tolerance by 0.0107; S2 exceeds the tolerance by 0.00362; S3 exceeds the tolerance by 0.00724; S4 exceeds the tolerance by 0.00264
00449: S1 exceeds the tolerance by 0.000115; S2 exceeds the tolerance by 4.03e-05; S3 exceeds the tolerance by 4.03e-05; S4 exceeds the tolerance by 2.37e-05
00450: S1 exceeds the tolerance by 0.269; S2 exceeds the tolerance by 1.37; S3 exceeds the tolerance by 0.554
00452: S1 exceeds the tolerance by 0.577; S2 exceeds the tolerance by 0.258; S3 exceeds the tolerance by 0.401
00453: S1 exceeds the tolerance by 0.0785; S2 exceeds the tolerance by 0.438; S3 exceeds the tolerance by 0.0783
00454: S1 exceeds the tolerance by 0.589; S2 exceeds the tolerance by 0.594; S3 exceeds the tolerance by 0.14
00455: S1 exceeds the tolerance by 0.571; S2 exceeds the tolerance by 0.239; S3 exceeds the tolerance by 0.344
00456: S1 exceeds the tolerance by 1.28; S2 exceeds the tolerance by 0.586; S3 exceeds the tolerance by 0.685
00457: S1 exceeds the tolerance by 1.01; S2 exceeds the tolerance by 0.554; S3 exceeds the tolerance by 0.375
00458: S1 exceeds the tolerance by 0.996; S2 exceeds the tolerance by 0.498; S3 exceeds the tolerance by 1.29
00459: S1 exceeds the tolerance by 1.28; S2 exceeds the tolerance by 0.586; S3 exceeds the tolerance by 0.685
00460: S1 exceeds the tolerance by 1.01; S2 exceeds the tolerance by 0.554; S3 exceeds the tolerance by 0.375
00461: S1 exceeds the tolerance by 0.996; S2 exceeds the tolerance by 0.498; S3 exceeds the tolerance by 1.29
00619: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00620: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00621: S2 exceeds the tolerance by 0.399; S3 exceeds the tolerance by 0.299
00622: S2 exceeds the tolerance by 0.228; S3 exceeds the tolerance by 0.171
00623: S2 exceeds the tolerance by 0.749; S3 exceeds the tolerance by 0.561
00624: S2 exceeds the tolerance by 0.491; S3 exceeds the tolerance by 0.368
00634: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00635: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00636: S2 exceeds the tolerance by 0.399; S3 exceeds the tolerance by 0.299
00637: S2 exceeds the tolerance by 0.228; S3 exceeds the tolerance by 0.171
00638: S2 exceeds the tolerance by 0.749; S3 exceeds the tolerance by 0.561
00639: S2 exceeds the tolerance by 0.491; S3 exceeds the tolerance by 0.368
00646: S2 exceeds the tolerance by 0.399
00647: S1 exceeds the tolerance by 0.129; S2 exceeds the tolerance by 0.979; S3 exceeds the tolerance by 0.129
00648: S2 exceeds the tolerance by 0.99
00649: S2 exceeds the tolerance by 0.466
00650: S1 exceeds the tolerance by 0.0495; S2 exceeds the tolerance by 1.37; S3 exceeds the tolerance by 0.0492
00651: S2 exceeds the tolerance by 1.29
00652: S1 exceeds the tolerance by 4.37e-06; S2 exceeds the tolerance by 4.37e-06; S3 exceeds the tolerance by 4.77e-06; S4 exceeds the tolerance by 6.56e-06
00653: S1 exceeds the tolerance by 4.78e-06; S2 exceeds the tolerance by 4.78e-06; S3 exceeds the tolerance by 4.67e-06; S4 exceeds the tolerance by 7.18e-06
00654: S1 exceeds the tolerance by 4.67e-06; S2 exceeds the tolerance by 4.67e-06; S3 exceeds the tolerance by 4.67e-06; S4 exceeds the tolerance by 7.02e-06
00655: S1 exceeds the tolerance by 7.34e-06; S2 exceeds the tolerance by 7.34e-06; S3 exceeds the tolerance by 7.34e-06; S4 exceeds the tolerance by 1.1e-05
00656: S1 exceeds the tolerance by 7.77e-06; S2 exceeds the tolerance by 7.77e-06; S3 exceeds the tolerance by 8.02e-06; S4 exceeds the tolerance by 1.17e-05
00657: S1 exceeds the tolerance by 6.66e-06; S2 exceeds the tolerance by 6.66e-06; S3 exceeds the tolerance by 6.58e-06; S4 exceeds the tolerance by 1e-05
00661: X1 exceeds the tolerance by 0.99; S1 exceeds the tolerance by 0.99
00662: X1 exceeds the tolerance by 0.499
00663: S4 exceeds the tolerance by 0.000662
00664: S4 exceeds the tolerance by 0.00062
00665: X1 exceeds the tolerance by 1.57; S1 exceeds the tolerance by 1.57
00666: X1 exceeds the tolerance by 0.245
00679: S2 exceeds the tolerance by 2.12; S3 exceeds the tolerance by 1.59
00680: S2 exceeds the tolerance by 0.511; S3 exceeds the tolerance by 0.383
00681: S2 exceeds the tolerance by 6.75; S3 exceeds the tolerance by 5.06
00682: S2 exceeds the tolerance by 0.925; S3 exceeds the tolerance by 0.694
00683: S2 exceeds the tolerance by 1.03; S3 exceeds the tolerance by 0.77
00684: S1 exceeds the tolerance by 1.34; S2 exceeds the tolerance by 6.57; S3 exceeds the tolerance by 4.93
00689: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00690: S2 exceeds the tolerance by 0.228; S3 exceeds the tolerance by 0.171
00700: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00702: S2 exceeds the tolerance by 0.228; S3 exceeds the tolerance by 0.171
00707: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00708: S2 exceeds the tolerance by 0.491; S3 exceeds the tolerance by 0.368
00723: S2 exceeds the tolerance by 1.99
00724: S1 exceeds the tolerance by 0.0493; S2 exceeds the tolerance by 1.37; S3 exceeds the tolerance by 0.049
00736: S2 exceeds the tolerance by 0.99
00737: S2 exceeds the tolerance by 1.27
00743: S1 exceeds the tolerance by 0.187; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.187
00744: S1 exceeds the tolerance by 0.56; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.179
00745: S1 exceeds the tolerance by 0.582; S2 exceeds the tolerance by 0.285; S3 exceeds the tolerance by 0.752
00746: S1 exceeds the tolerance by 0.108; S2 exceeds the tolerance by 0.029; S3 exceeds the tolerance by 0.029; S4 exceeds the tolerance by 0.029
00747: S1 exceeds the tolerance by 0.000108; S2 exceeds the tolerance by 3.47e-05; S3 exceeds the tolerance by 3.47e-05; S4 exceeds the tolerance by 1.19e-05
00748: S1 exceeds the tolerance by 0.0115; S2 exceeds the tolerance by 0.0067; S3 exceeds the tolerance by 0.0067; S4 exceeds the tolerance by 0.00649
00749: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00750: S2 exceeds the tolerance by 0.399; S3 exceeds the tolerance by 0.299
00751: S4 exceeds the tolerance by 0.97
00752: S1 exceeds the tolerance by 0.187; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.186; S4 exceeds the tolerance by 0.89
00753: S1 exceeds the tolerance by 0.136; S2 exceeds the tolerance by 0.591; S3 exceeds the tolerance by 0.136; S4 exceeds the tolerance by 1.05
00754: S1 exceeds the tolerance by 0.0912; S2 exceeds the tolerance by 0.496; S3 exceeds the tolerance by 0.0911
00755: S1 exceeds the tolerance by 0.0912; S2 exceeds the tolerance by 0.496; S3 exceeds the tolerance by 0.0911
00756: S1 exceeds the tolerance by 0.0912; S2 exceeds the tolerance by 0.496; S3 exceeds the tolerance by 0.0911
00757: S1 exceeds the tolerance by 0.549; S2 exceeds the tolerance by 0.618; S3 exceeds the tolerance by 0.127
00758: S1 exceeds the tolerance by 0.549; S2 exceeds the tolerance by 0.618; S3 exceeds the tolerance by 0.127
00759: S1 exceeds the tolerance by 0.587; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.187
00760: X1 exceeds the tolerance by 0.99; S1 exceeds the tolerance by 0.99
00761: X1 exceeds the tolerance by 0.499
00762: S4 exceeds the tolerance by 0.0662
00763: S1 exceeds the tolerance by 0.0819; S2 exceeds the tolerance by 0.383; S3 exceeds the tolerance by 0.0818
00764: S1 exceeds the tolerance by 0.583; S2 exceeds the tolerance by 0.616; S3 exceeds the tolerance by 0.13
00765: S1 exceeds the tolerance by 0.6; S2 exceeds the tolerance by 0.278; S3 exceeds the tolerance by 0.646
00766: S1 exceeds the tolerance by 0.00115; S2 exceeds the tolerance by 0.000304; S3 exceeds the tolerance by 0.000304; S4 exceeds the tolerance by 0.000304
00767: S1 exceeds the tolerance by 0.108; S2 exceeds the tolerance by 0.0409; S3 exceeds the tolerance by 0.0409; S4 exceeds the tolerance by 0.0286
00768: S1 exceeds the tolerance by 0.000115; S2 exceeds the tolerance by 7.36e-05; S3 exceeds the tolerance by 7.35e-05; S4 exceeds the tolerance by 6.49e-05
00769: S2 exceeds the tolerance by 0.749; S3 exceeds the tolerance by 0.561
00770: S2 exceeds the tolerance by 0.491; S3 exceeds the tolerance by 0.368
00771: S1 exceeds the tolerance by 0.08; S2 exceeds the tolerance by 0.389; S3 exceeds the tolerance by 0.0799
00772: S1 exceeds the tolerance by 0.08; S2 exceeds the tolerance by 0.389; S3 exceeds the tolerance by 0.0799
00773: S1 exceeds the tolerance by 0.0836; S2 exceeds the tolerance by 0.38; S3 exceeds the tolerance by 0.0835
00774: S1 exceeds the tolerance by 0.586; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.183
00775: S1 exceeds the tolerance by 0.0106; S2 exceeds the tolerance by 0.00393; S3 exceeds the tolerance by 0.00393; S4 exceeds the tolerance by 0.0027
00776: S1 exceeds the tolerance by 0.61; S2 exceeds the tolerance by 0.345; S3 exceeds the tolerance by 0.135
00777: S2 exceeds the tolerance by 0.228; S3 exceeds the tolerance by 0.171
00778: X1 exceeds the tolerance by 1.57; S1 exceeds the tolerance by 1.57
00779: X1 exceeds the tolerance by 1.57; S1 exceeds the tolerance by 1.57
00780: X1 exceeds the tolerance by 1.57; S1 exceeds the tolerance by 1.57
00789: S1 exceeds the tolerance by 0.183; S2 exceeds the tolerance by 0.745; S3 exceeds the tolerance by 0.183
00790: S1 exceeds the tolerance by 0.183; S2 exceeds the tolerance by 0.745; S3 exceeds the tolerance by 0.183
00791: S1 exceeds the tolerance by 0.187; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.187
00845: S1 exceeds the tolerance by 0.056; S2 exceeds the tolerance by 0.744
00846: S1 exceeds the tolerance by 0.0742; S2 exceeds the tolerance by 0.997; S3 exceeds the tolerance by 0.102; S4 exceeds the tolerance by 0.635
00847: S1 exceeds the tolerance by 0.0742; S2 exceeds the tolerance by 0.997; S3 exceeds the tolerance by 0.203; S4 exceeds the tolerance by 1.23
00848: S1 exceeds the tolerance by 0.0791; S2 exceeds the tolerance by 1.06
00849: S1 exceeds the tolerance by 0.0803; S2 exceeds the tolerance by 1.22; S3 exceeds the tolerance by 0.0629; S4 exceeds the tolerance by 0.454
00850: S1 exceeds the tolerance by 0.0792; S2 exceeds the tolerance by 1.23; S3 exceeds the tolerance by 0.209; S4 exceeds the tolerance by 1.53
00883: S1 exceeds the tolerance by 0.116; S2 exceeds the tolerance by 0.554; S3 exceeds the tolerance by 0.116
00884: S1 exceeds the tolerance by 0.142; S2 exceeds the tolerance by 0.655; S3 exceeds the tolerance by 0.287
00885: S1 exceeds the tolerance by 0.0278; S2 exceeds the tolerance by 0.00591; S3 exceeds the tolerance by 0.00591; S4 exceeds the tolerance by 0.00511
00886: S1 exceeds the tolerance by 0.084; S2 exceeds the tolerance by 0.406; S3 exceeds the tolerance by 0.0839
00887: S1 exceeds the tolerance by 0.336; S2 exceeds the tolerance by 0.433; S3 exceeds the tolerance by 0.31
00928: S1 exceeds the tolerance by 0.00015; S2 exceeds the tolerance by 0.000149
00930: S1 exceeds the tolerance by 1; S2 exceeds the tolerance by 2; S3 exceeds the tolerance by 3
00931: S1 exceeds the tolerance by 4; S2 exceeds the tolerance by 5; S3 exceeds the tolerance by 6
00933: S1 exceeds the tolerance by 0.873; S2 exceeds the tolerance by 0.786
00934: S1 exceeds the tolerance by 2
00935: S1 exceeds the tolerance by 3; S2 exceeds the tolerance by 1
00944: S1 exceeds the tolerance by 2.86; k1 exceeds the tolerance by 9
00945: S1 exceeds the tolerance by 13.6; C exceeds the tolerance by 9
00946: S1 exceeds the tolerance by 13.6; C exceeds the tolerance by 9
00947: S1 exceeds the tolerance by 1.87; C exceeds the tolerance by 9
00948: S1 exceeds the tolerance by 1.87; C exceeds the tolerance by 9
00952: S exceeds the tolerance by 100
00953: S exceeds the tolerance by 99
00962: S exceeds the tolerance by 100
00963: Q exceeds the tolerance by 9.89; R2 exceeds the tolerance by 9.89
00964: S exceeds the tolerance by 100
00965: S exceeds the tolerance by 100
00966: S exceeds the tolerance by 990
00967: Q exceeds the tolerance by 4.94; R exceeds the tolerance by 4.94
00972: X exceeds the tolerance by 10
00978: x exceeds the tolerance by 5; y exceeds the tolerance by 1; z exceeds the tolerance by 3
00979: x exceeds the tolerance by 2; p exceeds the tolerance by 3; q exceeds the tolerance by 1
00980: x exceeds the tolerance by 2; p exceeds the tolerance by 3; q exceeds the tolerance by 1
00995: p2 exceeds the tolerance by 1
00996: p2 exceeds the tolerance by 1
00997: p1 exceeds the tolerance by 1; p2 exceeds the tolerance by 1
01000: S1 exceeds the tolerance by 17.7; S2 exceeds the tolerance by 258; k3 exceeds the tolerance by 1.42; k4 exceeds the tolerance by 4.39; k5 exceeds the tolerance by 2.24; comp2 exceeds the tolerance by 4.39
01045: S1 exceeds the tolerance by 0.056; S2 exceeds the tolerance by 0.744
01046: S1 exceeds the tolerance by 0.0742; S2 exceeds the tolerance by 0.997; S3 exceeds the tolerance by 0.102; S4 exceeds the tolerance by 0.635
01047: S1 exceeds the tolerance by 0.0742; S2 exceeds the tolerance by 0.997; S3 exceeds the tolerance by 0.203; S4 exceeds the tolerance by 1.23
01048: S1 exceeds the tolerance by 0.0791; S2 exceeds the tolerance by 1.06
01049: S1 exceeds the tolerance by 0.0803; S2 exceeds the tolerance by 1.22; S3 exceeds the tolerance by 0.0629; S4 exceeds the tolerance by 0.454
01050: S1 exceeds the tolerance by 0.0792; S2 exceeds the tolerance by 1.23; S3 exceeds the tolerance by 0.209; S4 exceeds the tolerance by 1.53
01071: S1 exceeds the tolerance by 0.112; S2 exceeds the tolerance by 0.393; S3 exceeds the tolerance by 0.112
01072: S1 exceeds the tolerance by 0.000106; S2 exceeds the tolerance by 3.14e-05; S3 exceeds the tolerance by 6.29e-05; S4 exceeds the tolerance by 1.26e-05
01073: S1 exceeds the tolerance by 0.371; S2 exceeds the tolerance by 0.743; S3 exceeds the tolerance by 0.245
01074: S1 exceeds the tolerance by 0.0504; S2 exceeds the tolerance by 0.209; S3 exceeds the tolerance by 0.0503
01075: S1 exceeds the tolerance by 0.107; S2 exceeds the tolerance by 0.0362; S3 exceeds the tolerance by 0.0724; S4 exceeds the tolerance by 0.0264
01076: S1 exceeds the tolerance by 0.251; S2 exceeds the tolerance by 1.1; S3 exceeds the tolerance by 0.429
01094: S2 exceeds the tolerance by 0.99
01095: S1 exceeds the tolerance by 0.0495; S2 exceeds the tolerance by 1.37; S3 exceeds the tolerance by 0.0492
01106: X exceeds the tolerance by 1
01119: e1 exceeds the tolerance by 2; e2 exceeds the tolerance by 3
01120: S3 exceeds the tolerance by 2
01212: x exceeds the tolerance by 4
01213: x exceeds the tolerance by 4
01214: x exceeds the tolerance by 4
01222: c exceeds the tolerance by 2
01227: S1 exceeds the tolerance by 4.25; k1 exceeds the tolerance by 0.5
01228: S1 exceeds the tolerance by 4.5; k1 exceeds the tolerance by 1
01229: S1 exceeds the tolerance by 4.5; k1 exceeds the tolerance by 1
01230: S1 exceeds the tolerance by 4.5; k1 exceeds the tolerance by 1
01241: p exceeds the tolerance by 2
01242: p exceeds the tolerance by 2
01243: p exceeds the tolerance by 2
01260: p2 exceeds the tolerance by 9
01261: p2 exceeds the tolerance by 5
01262: p2 exceeds the tolerance by 7
01263: p2 exceeds the tolerance by 5
01266: p2 exceeds the tolerance by 9.98
01267: p2 exceeds the tolerance by 5
01268: p2 exceeds the tolerance by 5
01269: p2 exceeds the tolerance by 4
01270: p2 exceeds the tolerance by 7.98
01282: p1 exceeds the tolerance by 1
01284: p1 exceeds the tolerance by 3
01285: p1 exceeds the tolerance by 4
01286: p1 exceeds the tolerance by 15
01287: p1 exceeds the tolerance by 15
01293: p2 exceeds the tolerance by 5
01294: p2 exceeds the tolerance by 7
01295: p2 exceeds the tolerance by 5
01297: p2 exceeds the tolerance by 9.98
01298: p2 exceeds the tolerance by 5
01299: p2 exceeds the tolerance by 5
01303: p1 exceeds the tolerance by 3
01304: p1 exceeds the tolerance by 5
01305: p1 exceeds the tolerance by 5
01324: y exceeds the tolerance by 3.5
01325: y exceeds the tolerance by 5.5
01326: y exceeds the tolerance by 3.5
01327: y exceeds the tolerance by 5.5
01328: x exceeds the tolerance by 6; y exceeds the tolerance by 1
01329: x exceeds the tolerance by 6; y exceeds the tolerance by 7
01330: x exceeds the tolerance by 4; y exceeds the tolerance by 3
01331: x exceeds the tolerance by 4; y exceeds the tolerance by 7
01332: x exceeds the tolerance by 2
01333: x exceeds the tolerance by 4; y exceeds the tolerance by 3
01334: x exceeds the tolerance by 4; y exceeds the tolerance by 7
01335: x exceeds the tolerance by 4
01336: x exceeds the tolerance by 3
01337: x exceeds the tolerance by 3; y exceeds the tolerance by 0.999
01340: S1 exceeds the tolerance by 9; k1 exceeds the tolerance by 2
01444: A exceeds the tolerance by 5
01445: A exceeds the tolerance by 10
01446: A exceeds the tolerance by 5
01447: A exceeds the tolerance by 5; B exceeds the tolerance by 5
01448: A exceeds the tolerance by 10; B exceeds the tolerance by 10
01466: Allsum exceeds the tolerance by 200
01504: S1 exceeds the tolerance by 0.0139; x exceeds the tolerance by 0.0199
01505: C1 exceeds the tolerance by 0.39; S1 exceeds the tolerance by 0.0471; x exceeds the tolerance by 0.351
01506: C1 exceeds the tolerance by 0.39; S1 exceeds the tolerance by 0.0288; x exceeds the tolerance by 0.41
01507: S1 exceeds the tolerance by 0.0363; x exceeds the tolerance by 0.0519
01508: S1 exceeds the tolerance by 0.112; x exceeds the tolerance by 0.16
01509: S1 exceeds the tolerance by 0.14; x exceeds the tolerance by 0.2
01510: S1 exceeds the tolerance by 0.7; x exceeds the tolerance by 1
01511: S1 exceeds the tolerance by 0.0139; x exceeds the tolerance by 0.0199
01512: x2 exceeds the tolerance by 5
01518: P2 exceeds the tolerance by 3
01520: P2 exceeds the tolerance by 3
01521: P2 exceeds the tolerance by 3
01523: P2 exceeds the tolerance by 0.5
01524: P2 exceeds the tolerance by 2.5
01525: P2 exceeds the tolerance by 3
01527: P2 exceeds the tolerance by 3
01528: P2 exceeds the tolerance by 1.5
01529: P2 exceeds the tolerance by 3.5
01530: P0 exceeds the tolerance by 2.72; P1 exceeds the tolerance by 15.2; P2 exceeds the tolerance by 1; P3 exceeds the tolerance by 1; P4 exceeds the tolerance by 3.14; P5 exceeds the tolerance by 1.05; P6 exceeds the tolerance by 1.57; P7 exceeds the tolerance by 0.523; P8 exceeds the tolerance by 1.23; P9 exceeds the tolerance by 1.43; P10 exceeds the tolerance by 1; P11 exceeds the tolerance by 4; P12 exceeds the tolerance by 4; P13 exceeds the tolerance by 0.948; P14 exceeds the tolerance by 0.976; P15 exceeds the tolerance by 1; P16 exceeds the tolerance by 2.72; P17 exceeds the tolerance by 2.16; P18 exceeds the tolerance by 5; P19 exceeds the tolerance by 9; P20 exceeds the tolerance by 1.61; P22 exceeds the tolerance by 0.699; P24 exceeds the tolerance by 1; P25 exceeds the tolerance by 4; P26 exceeds the tolerance by 5.56; P27 exceeds the tolerance by 16; P28 exceeds the tolerance by 9.61; P29 exceeds the tolerance by 2; P30 exceeds the tolerance by 2.72; P31 exceeds the tolerance by 0.863; P33 exceeds the tolerance by 0.374; P35 exceeds the tolerance by 2.01; P36 exceeds the tolerance by 0.291; P37 exceeds the tolerance by 1.14; P38 exceeds the tolerance by 1.02; P39 exceeds the tolerance by 4.93; P40 exceeds the tolerance by 0.304; P41 exceeds the tolerance by 2.83; P42 exceeds the tolerance by 1.12; P43 exceeds the tolerance by 1.14; P44 exceeds the tolerance by 1.47; P45 exceeds the tolerance by 5.29; P46 exceeds the tolerance by 0.803; P47 exceeds the tolerance by 0.867; P48 exceeds the tolerance by 1.51; P49 exceeds the tolerance by 5.3; P52 exceeds the tolerance by 1
01531: P0 exceeds the tolerance by 2; P1 exceeds the tolerance by 2; P2 exceeds the tolerance by 2; P3 exceeds the tolerance by 2; P4 exceeds the tolerance by 2; P5 exceeds the tolerance by 2; P6 exceeds the tolerance by 2; P7 exceeds the tolerance by 2; P8 exceeds the tolerance by 2; P9 exceeds the tolerance by 2; P10 exceeds the tolerance by 2; P11 exceeds the tolerance by 2; P12 exceeds the tolerance by 2; P13 exceeds the tolerance by 2; P14 exceeds the tolerance by 2; P15 exceeds the tolerance by 2; P16 exceeds the tolerance by 2; P17 exceeds the tolerance by 2; P18 exceeds the tolerance by 2; P19 exceeds the tolerance by 2; P20 exceeds the tolerance by 2; P21 exceeds the tolerance by 2; P22 exceeds the tolerance by 2; P23 exceeds the tolerance by 2; P24 exceeds the tolerance by 2; P25 exceeds the tolerance by 2; P26 exceeds the tolerance by 2; P27 exceeds the tolerance by 2; P28 exceeds the tolerance by 2; P29 exceeds the tolerance by 2; P30 exceeds the tolerance by 2; P31 exceeds the tolerance by 2; P32 exceeds the tolerance by 2; P33 exceeds the tolerance by 2; P34 exceeds the tolerance by 2; P35 exceeds the tolerance by 2; P36 exceeds the tolerance by 2; P37 exceeds the tolerance by 2; P38 exceeds the tolerance by 2; P39 exceeds the tolerance by 2; P40 exceeds the tolerance by 2; P41 exceeds the tolerance by 2; P42 exceeds the tolerance by 2; P43 exceeds the tolerance by 2; P44 exceeds the tolerance by 2; P45 exceeds the tolerance by 2; P46 exceeds the tolerance by 2; P47 exceeds the tolerance by 2; P48 exceeds the tolerance by 2; P49 exceeds the tolerance by 2; P50 exceeds the tolerance by 2; P51 exceeds the tolerance by 2; P52 exceeds the tolerance by 2; P53 exceeds the tolerance by 2; P54 exceeds the tolerance by 2; P55 exceeds the tolerance by 2
01532: P0 exceeds the tolerance by 2; P1 exceeds the tolerance by 2; P2 exceeds the tolerance by 2; P3 exceeds the tolerance by 2; P4 exceeds the tolerance by 2; P5 exceeds the tolerance by 2; P6 exceeds the tolerance by 2; P7 exceeds the tolerance by 2; P8 exceeds the tolerance by 2; P9 exceeds the tolerance by 2; P10 exceeds the tolerance by 2; P11 exceeds the tolerance by 2; P12 exceeds the tolerance by 2; P13 exceeds the tolerance by 2; P14 exceeds the tolerance by 2; P15 exceeds the tolerance by 2; P16 exceeds the tolerance by 2; P17 exceeds the tolerance by 2; P18 exceeds the tolerance by 2; P19 exceeds the tolerance by 2; P20 exceeds the tolerance by 2; P21 exceeds the tolerance by 2; P22 exceeds the tolerance by 2; P23 exceeds the tolerance by 2; P24 exceeds the tolerance by 2; P25 exceeds the tolerance by 2; P26 exceeds the tolerance by 2; P27 exceeds the tolerance by 2; P28 exceeds the tolerance by 2; P29 exceeds the tolerance by 2; P30 exceeds the tolerance by 2; P31 exceeds the tolerance by 2; P32 exceeds the tolerance by 2; P33 exceeds the tolerance by 2; P34 exceeds the tolerance by 2; P35 exceeds the tolerance by 2; P36 exceeds the tolerance by 2; P37 exceeds the tolerance by 2; P38 exceeds the tolerance by 2; P39 exceeds the tolerance by 2; P40 exceeds the tolerance by 2; P41 exceeds the tolerance by 2; P42 exceeds the tolerance by 2; P43 exceeds the tolerance by 2; P44 exceeds the tolerance by 2; P45 exceeds the tolerance by 2; P46 exceeds the tolerance by 2; P47 exceeds the tolerance by 2; P48 exceeds the tolerance by 2; P49 exceeds the tolerance by 2; P50 exceeds the tolerance by 2; P51 exceeds the tolerance by 2; P52 exceeds the tolerance by 2
01533: P0 exceeds the tolerance by 3; P1 exceeds the tolerance by 3; P2 exceeds the tolerance by 3; P3 exceeds the tolerance by 3; P4 exceeds the tolerance by 3; P5 exceeds the tolerance by 3; P6 exceeds the tolerance by 3; P7 exceeds the tolerance by 2; P8 exceeds the tolerance by 3; P9 exceeds the tolerance by 2; P10 exceeds the tolerance by 3; P11 exceeds the tolerance by 3; P12 exceeds the tolerance by 2; P13 exceeds the tolerance by 2; P14 exceeds the tolerance by 3; P15 exceeds the tolerance by 3; P16 exceeds the tolerance by 3; P17 exceeds the tolerance by 3; P18 exceeds the tolerance by 2; P19 exceeds the tolerance by 3; P20 exceeds the tolerance by 2; P21 exceeds the tolerance by 2; P22 exceeds the tolerance by 2; P23 exceeds the tolerance by 2; P24 exceeds the tolerance by 3; P25 exceeds the tolerance by 3; P26 exceeds the tolerance by 3; P27 exceeds the tolerance by 3; P28 exceeds the tolerance by 3; P29 exceeds the tolerance by 3; P30 exceeds the tolerance by 3; P31 exceeds the tolerance by 3; P32 exceeds the tolerance by 2; P33 exceeds the tolerance by 2; P34 exceeds the tolerance by 2; P35 exceeds the tolerance by 3; P36 exceeds the tolerance by 2; P37 exceeds the tolerance by 3; P38 exceeds the tolerance by 2; P39 exceeds the tolerance by 3; P40 exceeds the tolerance by 2; P41 exceeds the tolerance by 3; P42 exceeds the tolerance by 3; P43 exceeds the tolerance by 3; P44 exceeds the tolerance by 2; P45 exceeds the tolerance by 3; P46 exceeds the tolerance by 3; P47 exceeds the tolerance by 2; P48 exceeds the tolerance by 3; P49 exceeds the tolerance by 3; P50 exceeds the tolerance by 2; P51 exceeds the tolerance by 3; P52 exceeds the tolerance by 2
01536: S1 exceeds the tolerance by 7
01575: k1 exceeds the tolerance by 7.2; k2 exceeds the tolerance by 7.2
01577: P1 exceeds the tolerance by 2
01578: P1 exceeds the tolerance by 2
01579: P1 exceeds the tolerance by 5.5
01580: P1 exceeds the tolerance by 2; S1 exceeds the tolerance by 0.7
01583: S1 exceeds the tolerance by 1.1
01584: P1 exceeds the tolerance by 2; S1 exceeds the tolerance by 0.9
01586: P1 exceeds the tolerance by 4.5; S1 exceeds the tolerance by 2.02
01588: S exceeds the tolerance by 100
01589: S exceeds the tolerance by 99
01590: S exceeds the tolerance by 99.8
01591: S exceeds the tolerance by 99.8
01592: S exceeds the tolerance by 99.8
01599: S exceeds the tolerance by 99.8
01601: P2 exceeds the tolerance by 2
01603: P2 exceeds the tolerance by 4.5
01604: P1 exceeds the tolerance by 4.5
01605: S exceeds the tolerance by 99.8
01626: S exceeds the tolerance by 99.8
01627: S exceeds the tolerance by 99.8
01658: p1 exceeds the tolerance by 2
01659: p1 exceeds the tolerance by 2
01660: p1 exceeds the tolerance by 2
01662: p1 exceeds the tolerance by 2
01663: p1 exceeds the tolerance by 4
01664: p1 exceeds the tolerance by 6.02e+23
01669: S1 exceeds the tolerance by 0.225; S2 exceeds the tolerance by 0.135
01670: S1 exceeds the tolerance by 0.225; S2 exceeds the tolerance by 0.0446
01671: S1 exceeds the tolerance by 0.135; S2 exceeds the tolerance by 0.135
01672: S1 exceeds the tolerance by 0.313; S2 exceeds the tolerance by 0.188
01673: S1 exceeds the tolerance by 0.313; S2 exceeds the tolerance by 0.0623
01674: S1 exceeds the tolerance by 0.191; S2 exceeds the tolerance by 0.191
01675: S1 exceeds the tolerance by 4.17; S2 exceeds the tolerance by 0.102
01676: S1 exceeds the tolerance by 4.17; S2 exceeds the tolerance by 0.0336
01677: S1 exceeds the tolerance by 4.14; S2 exceeds the tolerance by 0.889
01681: S1 exceeds the tolerance by 2.17; S2 exceeds the tolerance by 0.894
01682: S1 exceeds the tolerance by 2.17; S2 exceeds the tolerance by 0.964
01683: S1 exceeds the tolerance by 2.17; S2 exceeds the tolerance by 0.894
01684: S1 exceeds the tolerance by 1; S2 exceeds the tolerance by 3
01685: S1 exceeds the tolerance by 1; S2 exceeds the tolerance by 3
01686: S1 exceeds the tolerance by 1; S2 exceeds the tolerance by 3
01687: S2 exceeds the tolerance by 1.33
01688: S2 exceeds the tolerance by 1.22
01689: S1 exceeds the tolerance by 1.37
01690: S2 exceeds the tolerance by 1.43
01691: S2 exceeds the tolerance by 1.32
01692: S1 exceeds the tolerance by 1.43
01693: P1 exceeds the tolerance by 2
01694: P1 exceeds the tolerance by 2
01695: P1 exceeds the tolerance by 2
01696: P1 exceeds the tolerance by 2
01697: P1 exceeds the tolerance by 2
01698: P1 exceeds the tolerance by 2
01699: P1 exceeds the tolerance by 2
01701: P1 exceeds the tolerance by 10
01702: P1 exceeds the tolerance by 9
01703: S1 exceeds the tolerance by 7.7
01705: S1 exceeds the tolerance by 2.5
01706: S1 exceeds the tolerance by 3
01707: S1 exceeds the tolerance by 1
01708: P1 exceeds the tolerance by 8.5
01709: P1 exceeds the tolerance by 6.5
01710: k1 exceeds the tolerance by 8.5
01713: k1 exceeds the tolerance by 3
01714: k1 exceeds the tolerance by 3
01715: k1 exceeds the tolerance by 1.1
01716: k1 exceeds the tolerance by 6.9
01717: P1 exceeds the tolerance by 3
01719: P1 exceeds the tolerance by 3
01720: P1 exceeds the tolerance by 3.5
01721: P1 exceeds the tolerance by 5.5
01754: P1 exceeds the tolerance by 1.5
01755: P1 exceeds the tolerance by 1.5
01756: P1 exceeds the tolerance by 3.5
01757: P1 exceeds the tolerance by 23.5
01758: P1 exceeds the tolerance by 1.5
01759: P1 exceeds the tolerance by 2.5
01769: k0 exceeds the tolerance by 4
01770: k0 exceeds the tolerance by 4
01771: k0 exceeds the tolerance by 4
01772: k0 exceeds the tolerance by 4
01779: C1 exceeds the tolerance by 0.3; S1 exceeds the tolerance by 0.9; x exceeds the tolerance by 1.5
01780: C1 exceeds the tolerance by 0.3; S1 exceeds the tolerance by 0.9; x exceeds the tolerance by 1.5
```

**2 cases**

```text
01820: SimulationFailure: libopencor: SimulationError: result: the name 'time' occurs twice
01821: SimulationFailure: libopencor: SimulationError: result: the name 'time' occurs twice
```

The test tags of the cases with a numerical mismatch:

| tags | cases | ids |
| --- | --- | --- |
| Amount | 75 | 00026, 00041, 00071, 00072, 00073, 00074, 00348, 00349, 00350, 00351, 00352, 00353, 00354, 00355, 00356, 00357, 00358, 00359, 00360, 00361, 00363, 00364, 00366, 00367, 00399, 00400, 00401, 00405, 00407, 00408, 00409, 00410, 00411, 00412, 00415, 00416, 00417, 00418, 00423, 00424, 00620, 00623, 00638, 00646, 00647, 00648, 00649, 00650, 00651, 00654, 00657, 00661, 00662, 00665, 00666, 00751, 00752, 00753, 00754, 00760, 00773, 00774, 00775, 00778, 00791, 00845, 00846, 00847, 00848, 00883, 00884, 00885, 00886, 00930, 00931 |
| NonConstantParameter | 26 | 00172, 00396, 00397, 00398, 00402, 00403, 00404, 00453, 00455, 00979, 01119, 01214, 01260, 01262, 01263, 01266, 01267, 01268, 01303, 01304, 01305, 01521, 01658, 01659, 01662, 01664 |
| Amount, InitialValueReassigned | 25 | 00619, 00621, 00622, 00624, 00634, 00635, 00636, 00637, 00639, 00652, 00653, 00655, 00656, 00663, 00755, 00756, 00761, 00762, 00771, 00772, 00777, 00779, 00780, 00789, 00790 |
| Amount, BoundaryCondition | 17 | 00375, 00376, 00377, 00378, 00379, 00380, 00381, 00382, 00383, 00432, 00433, 00434, 00436, 00437, 00438, 00439, 00440 |
| Concentration, NonUnityCompartment | 14 | 00374, 00743, 00744, 00745, 00746, 00747, 00748, 00749, 00763, 00765, 00766, 00767, 00768, 00769 |
| Amount, EventIsPersistent | 13 | 00406, 00413, 00414, 00420, 00421, 00757, 00758, 00759, 00776, 00850, 00887, 00933, 00934 |
| Amount, NonConstantParameter | 13 | 00944, 01227, 01228, 01229, 01230, 01269, 01270, 01293, 01294, 01295, 01297, 01298, 01299 |
| Amount, NonUnityCompartment | 12 | 00369, 00370, 00371, 00372, 00373, 00426, 00428, 00429, 00430, 00431, 00680, 00683 |
| EventT0Firing, NonConstantParameter | 12 | 00995, 00996, 00997, 01332, 01335, 01527, 01663, 01693, 01694, 01695, 01696, 01697 |
| Amount, ConversionFactors | 9 | 01669, 01670, 01671, 01672, 01673, 01674, 01681, 01682, 01683 |
| Amount, LocalParameters | 9 | 00389, 00392, 00395, 00446, 00449, 00452, 00707, 00736, 00737 |
| Amount, AssignedConstantStoichiometry, InitialValueReassigned, NonUnityStoichiometry | 8 | 01071, 01072, 01073, 01074, 01075, 01076, 01094, 01095 |
| EventUsesTriggerTimeValues, NonConstantParameter | 8 | 00459, 00460, 00461, 01324, 01328, 01330, 01528, 01701 |
| Amount, NonUnityStoichiometry | 7 | 00387, 00390, 00393, 00444, 00447, 00723, 00724 |
| EventUsesAssignmentTimeValues, NonConstantParameter | 7 | 00980, 01325, 01329, 01331, 01529, 01604, 01702 |
| NonConstantParameter, UncommonMathML | 6 | 01212, 01213, 01530, 01531, 01532, 01533 |
| 0D-Compartment, Amount | 5 | 00362, 00365, 00368, 00419, 00425 |
| Amount, AssignedVariableStoichiometry, InitialValueReassigned, NonUnityStoichiometry | 5 | 01444, 01445, 01446, 01447, 01448 |
| Amount, BoundaryCondition, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, VolumeConcentrationRates | 5 | 01504, 01505, 01506, 01507, 01512 |
| Amount, ConstantSpecies | 5 | 00384, 00385, 00386, 00441, 00443 |
| Amount, HasOnlySubstanceUnits, LocalParameters, NonConstantParameter, NonUnityCompartment, NonUnityStoichiometry, SpeciesReferenceInMath | 4 | 01769, 01770, 01771, 01772 |
| Amount, InitialValueReassigned, NonUnityCompartment | 4 | 00679, 00681, 00682, 00684 |
| Amount, ReversibleReaction | 4 | 01045, 01046, 01047, 01048 |
| Concentration, InitialValueReassigned, NonUnityCompartment | 4 | 00689, 00690, 00750, 00770 |
| EventIsPersistent, NonConstantParameter | 4 | 00454, 01525, 01660, 01759 |
| Amount, ConversionFactors, EventIsPersistent | 3 | 01675, 01676, 01677 |
| Amount, ConversionFactors, EventT0Firing | 3 | 01684, 01685, 01686 |
| Amount, ConversionFactors, EventUsesAssignmentTimeValues | 3 | 01690, 01691, 01692 |
| Amount, ConversionFactors, EventUsesTriggerTimeValues | 3 | 01687, 01688, 01689 |
| Amount, EventUsesTriggerTimeValues | 3 | 00456, 00457, 00458 |
| BoolNumericSwap, NonConstantParameter | 3 | 01285, 01286, 01287 |
| EventIsNotPersistent, InitialValueReassigned, NonConstantParameter, RandomEventExecution | 3 | 01588, 01589, 01591 |
| EventIsNotPersistent, NonConstantParameter, RandomEventExecution | 3 | 00952, 00962, 00964 |
| EventT0Firing, InitialValueReassigned, NonConstantParameter | 3 | 01578, 01698, 01699 |
| NoMathML, NonConstantParameter | 3 | 01241, 01242, 01243 |
| Amount, BoundaryCondition, InitialValueReassigned | 2 | 00700, 00702 |
| Amount, BoundaryCondition, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment | 2 | 01779, 01780 |
| Amount, EventUsesTriggerTimeValues, ReversibleReaction | 2 | 00849, 01049 |
| EventIsNotPersistent, EventIsPersistent, EventUsesTriggerTimeValues, NonConstantParameter, RandomEventExecution | 2 | 00965, 00966 |
| EventIsNotPersistent, NonConstantParameter | 2 | 00963, 00967 |
| EventIsPersistent, EventT0Firing, NonConstantParameter | 2 | 01337, 01758 |
| InitialValueReassigned, NonConstantParameter | 2 | 01261, 01577 |
| 0D-Compartment, Amount, EventIsPersistent | 1 | 00422 |
| Amount, AssignedConstantStoichiometry, AssignedVariableStoichiometry, BoundaryCondition, ConstantSpecies, ConversionFactors, EventIsNotPersistent, EventIsPersistent, EventT0Firing, EventUsesAssignmentTimeValues, EventUsesTriggerTimeValues, HasOnlySubstanceUnits, InitialValueReassigned, LocalParameters, MultiCompartment, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, NonUnityStoichiometry, ReversibleReaction, SpeciesReferenceInMath | 1 | 01000 |
| Amount, AssignedVariableStoichiometry, DelayInEventAssignment, NonConstantParameter, NonUnityStoichiometry | 1 | 01536 |
| Amount, AssignedVariableStoichiometry, EventIsPersistent, InitialValueReassigned, NonConstantParameter, NonUnityStoichiometry | 1 | 01580 |
| Amount, AssignedVariableStoichiometry, EventIsPersistent, NonConstantParameter, NonUnityStoichiometry, SpeciesReferenceInMath | 1 | 01717 |
| Amount, AssignedVariableStoichiometry, EventT0Firing, NonConstantParameter, NonUnityStoichiometry, SpeciesReferenceInMath | 1 | 01719 |
| Amount, AssignedVariableStoichiometry, EventUsesAssignmentTimeValues, InitialValueReassigned, NonConstantParameter, NonUnityStoichiometry | 1 | 01586 |
| Amount, AssignedVariableStoichiometry, EventUsesAssignmentTimeValues, NonConstantParameter, NonUnityStoichiometry, SpeciesReferenceInMath | 1 | 01721 |
| Amount, AssignedVariableStoichiometry, EventUsesTriggerTimeValues, InitialValueReassigned, NonConstantParameter, NonUnityStoichiometry | 1 | 01584 |
| Amount, AssignedVariableStoichiometry, EventUsesTriggerTimeValues, NonConstantParameter, NonUnityStoichiometry, SpeciesReferenceInMath | 1 | 01720 |
| Amount, AssignedVariableStoichiometry, InitialValueReassigned, NonConstantParameter, NonUnityStoichiometry | 1 | 01106 |
| Amount, AssignedVariableStoichiometry, NonConstantParameter, NonUnityStoichiometry | 1 | 01583 |
| Amount, AssignedVariableStoichiometry, NonUnityStoichiometry | 1 | 00972 |
| Amount, BoundaryCondition, EventIsPersistent | 1 | 00435 |
| Amount, BoundaryCondition, EventIsPersistent, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, VolumeConcentrationRates | 1 | 01511 |
| Amount, BoundaryCondition, EventT0Firing, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, VolumeConcentrationRates | 1 | 01510 |
| Amount, BoundaryCondition, EventUsesAssignmentTimeValues, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, VolumeConcentrationRates | 1 | 01509 |
| Amount, BoundaryCondition, EventUsesTriggerTimeValues, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, VolumeConcentrationRates | 1 | 01508 |
| Amount, BoundaryCondition, HasOnlySubstanceUnits, NonConstantCompartment, NonUnityCompartment | 1 | 01222 |
| Amount, BoundaryCondition, HasOnlySubstanceUnits, NonUnityCompartment | 1 | 01705 |
| Amount, ConstantSpecies, EventIsPersistent | 1 | 00442 |
| Amount, EventIsNotPersistent, EventIsPersistent | 1 | 00935 |
| Amount, EventIsPersistent, HasOnlySubstanceUnits, LocalParameters, NonConstantParameter | 1 | 01710 |
| Amount, EventIsPersistent, HasOnlySubstanceUnits, NonUnityCompartment | 1 | 01703 |
| Amount, EventIsPersistent, NonUnityCompartment | 1 | 00427 |
| Amount, EventIsPersistent, NonUnityStoichiometry | 1 | 00450 |
| Amount, EventIsPersistent, ReversibleReaction | 1 | 01050 |
| Amount, EventT0Firing | 1 | 00928 |
| Amount, EventT0Firing, HasOnlySubstanceUnits, NonConstantCompartment, NonUnityCompartment | 1 | 01120 |
| Amount, EventT0Firing, LocalParameters, NonConstantParameter | 1 | 01713 |
| Amount, EventUsesAssignmentTimeValues, HasOnlySubstanceUnits, NonConstantParameter, NonUnityCompartment | 1 | 01709 |
| Amount, EventUsesAssignmentTimeValues, HasOnlySubstanceUnits, NonUnityCompartment | 1 | 01707 |
| Amount, EventUsesAssignmentTimeValues, LocalParameters, NonConstantParameter | 1 | 01716 |
| Amount, EventUsesAssignmentTimeValues, NonConstantParameter | 1 | 01327 |
| Amount, EventUsesTriggerTimeValues, HasOnlySubstanceUnits, NonConstantParameter, NonUnityCompartment | 1 | 01708 |
| Amount, EventUsesTriggerTimeValues, HasOnlySubstanceUnits, NonUnityCompartment | 1 | 01706 |
| Amount, EventUsesTriggerTimeValues, InitialValueReassigned | 1 | 00664 |
| Amount, EventUsesTriggerTimeValues, LocalParameters, NonConstantParameter | 1 | 01715 |
| Amount, EventUsesTriggerTimeValues, NonConstantParameter | 1 | 01326 |
| Amount, InitialValueReassigned, LocalParameters | 1 | 00708 |
| Amount, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment | 1 | 00946 |
| Amount, LocalParameters, NonConstantParameter | 1 | 01714 |
| Amount, NonConstantCompartment, NonUnityCompartment | 1 | 00945 |
| Amount, NonConstantParameter, ReversibleReaction | 1 | 01340 |
| AssignedVariableStoichiometry, EventIsNotPersistent, InitialValueReassigned, NonConstantParameter, NonUnityStoichiometry, RandomEventExecution, SpeciesReferenceInMath | 1 | 01626 |
| BoolNumericSwap, EventT0Firing, NonConstantParameter | 1 | 01284 |
| BoolNumericSwap, InitialValueReassigned | 1 | 01282 |
| Concentration, EventIsPersistent, NonUnityCompartment | 1 | 00764 |
| Concentration, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment | 1 | 00948 |
| Concentration, NonConstantCompartment, NonUnityCompartment | 1 | 00947 |
| DelayInEventAssignment, EventIsNotPersistent, InitialValueReassigned, NonConstantParameter, RandomEventExecution | 1 | 01592 |
| DelayInEventAssignment, EventUsesAssignmentTimeValues, NonConstantParameter | 1 | 01524 |
| DelayInEventAssignment, EventUsesTriggerTimeValues, NonConstantParameter | 1 | 01523 |
| DelayInTrigger, EventIsNotPersistent, NonConstantParameter | 1 | 01520 |
| DelayInTrigger, EventIsPersistent, NonConstantParameter | 1 | 01518 |
| EventIsNotPersistent, EventIsPersistent, EventUsesAssignmentTimeValues, EventUsesTriggerTimeValues, NonConstantParameter | 1 | 00978 |
| EventIsNotPersistent, EventT0Firing, InitialValueReassigned, NonConstantParameter | 1 | 01755 |
| EventIsNotPersistent, EventT0Firing, InitialValueReassigned, NonConstantParameter, RandomEventExecution | 1 | 01466 |
| EventIsNotPersistent, EventT0Firing, NonConstantParameter | 1 | 01336 |
| EventIsNotPersistent, EventUsesAssignmentTimeValues, InitialValueReassigned, NonConstantParameter, RandomEventExecution | 1 | 01590 |
| EventIsNotPersistent, InitialValueReassigned, NoMathML, NonConstantParameter, RandomEventExecution, UncommonMathML | 1 | 01605 |
| EventIsNotPersistent, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, RandomEventExecution, VolumeConcentrationRates | 1 | 01627 |
| EventIsNotPersistent, InitialValueReassigned, NonConstantParameter | 1 | 00953 |
| EventIsNotPersistent, InitialValueReassigned, NonConstantParameter, RandomEventExecution, UncommonMathML | 1 | 01599 |
| EventIsPersistent, EventT0Firing, InitialValueReassigned, NonConstantParameter | 1 | 01754 |
| EventIsPersistent, InitialValueReassigned, NonConstantParameter | 1 | 01575 |
| EventT0Firing, EventUsesAssignmentTimeValues, InitialValueReassigned, NonConstantParameter | 1 | 01757 |
| EventT0Firing, EventUsesAssignmentTimeValues, NonConstantParameter | 1 | 01334 |
| EventT0Firing, EventUsesTriggerTimeValues, InitialValueReassigned, NonConstantParameter | 1 | 01756 |
| EventT0Firing, EventUsesTriggerTimeValues, NonConstantParameter | 1 | 01333 |
| EventUsesAssignmentTimeValues, InitialValueReassigned, NonConstantParameter | 1 | 01579 |
| EventUsesAssignmentTimeValues, NoMathML, NonConstantParameter | 1 | 01603 |
| EventUsesTriggerTimeValues, NoMathML, NonConstantParameter | 1 | 01601 |

### roundtrip

502 of 1535 cases fail.

**400 cases, numerical mismatch**

```text
00026: S1 exceeds the tolerance by 0.9; S2 exceeds the tolerance by 1.13
00041: S1 exceeds the tolerance by 0.9; S2 exceeds the tolerance by 0.937
00071: S1 exceeds the tolerance by 0.873; S2 exceeds the tolerance by 0.786
00072: S1 exceeds the tolerance by 0.873; S2 exceeds the tolerance by 0.968
00073: S1 exceeds the tolerance by 0.873; S2 exceeds the tolerance by 0.873
00074: S1 exceeds the tolerance by 0.899; S2 exceeds the tolerance by 0.899
00172: S1 exceeds the tolerance by 0.899; S2 exceeds the tolerance by 1.13
00348: S1 exceeds the tolerance by 0.183; S2 exceeds the tolerance by 0.745; S3 exceeds the tolerance by 0.183
00349: S1 exceeds the tolerance by 0.578; S2 exceeds the tolerance by 0.745; S3 exceeds the tolerance by 0.179
00350: S1 exceeds the tolerance by 0.578; S2 exceeds the tolerance by 0.29; S3 exceeds the tolerance by 0.607
00351: S1 exceeds the tolerance by 0.00108; S2 exceeds the tolerance by 0.00029; S3 exceeds the tolerance by 0.00029; S4 exceeds the tolerance by 0.00029
00352: S1 exceeds the tolerance by 0.0108; S2 exceeds the tolerance by 0.00347; S3 exceeds the tolerance by 0.00347; S4 exceeds the tolerance by 0.00119
00353: S1 exceeds the tolerance by 0.115; S2 exceeds the tolerance by 0.0431; S3 exceeds the tolerance by 0.0431; S4 exceeds the tolerance by 0.065
00354: S1 exceeds the tolerance by 0.0912; S2 exceeds the tolerance by 0.496; S3 exceeds the tolerance by 0.0911
00355: S1 exceeds the tolerance by 0.0595; S2 exceeds the tolerance by 0.297; S3 exceeds the tolerance by 0.0593
00356: S1 exceeds the tolerance by 0.194; S2 exceeds the tolerance by 0.61; S3 exceeds the tolerance by 0.0599
00357: S1 exceeds the tolerance by 0.194; S2 exceeds the tolerance by 0.424; S3 exceeds the tolerance by 0.055
00358: S1 exceeds the tolerance by 0.552; S2 exceeds the tolerance by 0.284; S3 exceeds the tolerance by 0.59
00359: S1 exceeds the tolerance by 0.576; S2 exceeds the tolerance by 0.299; S3 exceeds the tolerance by 0.456
00360: S1 exceeds the tolerance by 0.132; S2 exceeds the tolerance by 0.692; S3 exceeds the tolerance by 0.132
00361: S1 exceeds the tolerance by 0.0127; S2 exceeds the tolerance by 0.0986; S3 exceeds the tolerance by 0.0126
00362: S1 exceeds the tolerance by 0.0802; S2 exceeds the tolerance by 0.444; S3 exceeds the tolerance by 0.0801
00363: S1 exceeds the tolerance by 0.571; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.179
00364: S1 exceeds the tolerance by 0.194; S2 exceeds the tolerance by 0.531; S3 exceeds the tolerance by 0.0823
00365: S1 exceeds the tolerance by 0.158; S2 exceeds the tolerance by 0.596; S3 exceeds the tolerance by 0.0466
00366: S1 exceeds the tolerance by 0.493; S2 exceeds the tolerance by 0.467; S3 exceeds the tolerance by 0.217
00367: S1 exceeds the tolerance by 0.145; S2 exceeds the tolerance by 0.248; S3 exceeds the tolerance by 0.0478
00368: S1 exceeds the tolerance by 0.234; S2 exceeds the tolerance by 0.484; S3 exceeds the tolerance by 0.251
00369: S1 exceeds the tolerance by 0.169; S2 exceeds the tolerance by 0.934; S3 exceeds the tolerance by 0.169
00370: S1 exceeds the tolerance by 0.911; S2 exceeds the tolerance by 0.365; S3 exceeds the tolerance by 0.08
00371: S1 exceeds the tolerance by 0.498; S2 exceeds the tolerance by 0.349; S3 exceeds the tolerance by 0.321
00372: S1 exceeds the tolerance by 0.0008; S2 exceeds the tolerance by 0.00022; S3 exceeds the tolerance by 0.00022; S4 exceeds the tolerance by 0.00022
00373: S1 exceeds the tolerance by 0.0415; S2 exceeds the tolerance by 0.0222; S3 exceeds the tolerance by 0.0222; S4 exceeds the tolerance by 0.186
00374: S1 exceeds the tolerance by 0.000156; S2 exceeds the tolerance by 8.59e-05; S3 exceeds the tolerance by 8.58e-05; S4 exceeds the tolerance by 0.000464
00375: S1 exceeds the tolerance by 0.235; S2 exceeds the tolerance by 0.999; S3 exceeds the tolerance by 0.235
00376: S1 exceeds the tolerance by 0.205; S2 exceeds the tolerance by 0.733
00377: S1 exceeds the tolerance by 0.205; S2 exceeds the tolerance by 0.899
00378: S1 exceeds the tolerance by 0.611; S2 exceeds the tolerance by 0.999; S3 exceeds the tolerance by 0.218
00379: S1 exceeds the tolerance by 0.205; S2 exceeds the tolerance by 0.733
00380: S1 exceeds the tolerance by 0.205; S2 exceeds the tolerance by 0.899
00381: S1 exceeds the tolerance by 0.478; S2 exceeds the tolerance by 0.499; S3 exceeds the tolerance by 0.119
00382: S1 exceeds the tolerance by 0.455; S2 exceeds the tolerance by 0.289
00383: S1 exceeds the tolerance by 0.618; S2 exceeds the tolerance by 0.499
00384: S1 exceeds the tolerance by 0.000114; S2 exceeds the tolerance by 4.04e-05; S3 exceeds the tolerance by 4.04e-05
00385: S1 exceeds the tolerance by 0.00111; S2 exceeds the tolerance by 0.000532; S3 exceeds the tolerance by 0.000989
00386: S1 exceeds the tolerance by 0.0116; S2 exceeds the tolerance by 0.00584; S3 exceeds the tolerance by 0.0166
00387: S1 exceeds the tolerance by 0.112; S2 exceeds the tolerance by 0.393; S3 exceeds the tolerance by 0.112
00389: S1 exceeds the tolerance by 0.187; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.186
00390: S1 exceeds the tolerance by 0.106; S2 exceeds the tolerance by 0.0314; S3 exceeds the tolerance by 0.0629; S4 exceeds the tolerance by 0.0126
00392: S1 exceeds the tolerance by 0.00108; S2 exceeds the tolerance by 0.000347; S3 exceeds the tolerance by 0.000347; S4 exceeds the tolerance by 0.000119
00393: S1 exceeds the tolerance by 0.371; S2 exceeds the tolerance by 0.743; S3 exceeds the tolerance by 0.245
00395: S1 exceeds the tolerance by 0.448; S2 exceeds the tolerance by 0.293; S3 exceeds the tolerance by 0.137
00396: S1 exceeds the tolerance by 0.148; S2 exceeds the tolerance by 0.745; S3 exceeds the tolerance by 0.148
00397: S1 exceeds the tolerance by 0.571; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.179
00398: S1 exceeds the tolerance by 0.578; S2 exceeds the tolerance by 0.29; S3 exceeds the tolerance by 0.607
00399: S1 exceeds the tolerance by 0.971; S2 exceeds the tolerance by 0.666; S3 exceeds the tolerance by 0.416
00400: S1 exceeds the tolerance by 0.943; S2 exceeds the tolerance by 0.327; S3 exceeds the tolerance by 0.143
00401: S1 exceeds the tolerance by 0.94; S2 exceeds the tolerance by 0.261; S3 exceeds the tolerance by 0.796
00402: S1 exceeds the tolerance by 0.971; S2 exceeds the tolerance by 0.666; S3 exceeds the tolerance by 0.416
00403: S1 exceeds the tolerance by 0.943; S2 exceeds the tolerance by 0.327; S3 exceeds the tolerance by 0.143
00404: S1 exceeds the tolerance by 0.94; S2 exceeds the tolerance by 0.261; S3 exceeds the tolerance by 0.796
00405: S1 exceeds the tolerance by 0.0835; S2 exceeds the tolerance by 0.448; S3 exceeds the tolerance by 0.0834
00406: S1 exceeds the tolerance by 0.442; S2 exceeds the tolerance by 0.478; S3 exceeds the tolerance by 0.215
00407: S1 exceeds the tolerance by 0.565; S2 exceeds the tolerance by 0.26; S3 exceeds the tolerance by 0.359
00408: S1 exceeds the tolerance by 0.000116; S2 exceeds the tolerance by 3e-05; S3 exceeds the tolerance by 3e-05; S4 exceeds the tolerance by 3e-05
00409: S1 exceeds the tolerance by 0.00113; S2 exceeds the tolerance by 0.000401; S3 exceeds the tolerance by 0.0004; S4 exceeds the tolerance by 0.000276
00410: S1 exceeds the tolerance by 0.0112; S2 exceeds the tolerance by 0.00453; S3 exceeds the tolerance by 0.00453; S4 exceeds the tolerance by 0.00616
00411: S1 exceeds the tolerance by 0.0943; S2 exceeds the tolerance by 0.428; S3 exceeds the tolerance by 0.0942
00412: S1 exceeds the tolerance by 0.0328; S2 exceeds the tolerance by 0.185; S3 exceeds the tolerance by 0.0327
00413: S1 exceeds the tolerance by 0.553; S2 exceeds the tolerance by 0.672; S3 exceeds the tolerance by 0.129
00414: S1 exceeds the tolerance by 0.52; S2 exceeds the tolerance by 0.479; S3 exceeds the tolerance by 0.328
00415: S1 exceeds the tolerance by 0.557; S2 exceeds the tolerance by 0.266; S3 exceeds the tolerance by 0.444
00416: S1 exceeds the tolerance by 0.582; S2 exceeds the tolerance by 0.274; S3 exceeds the tolerance by 0.379
00417: S1 exceeds the tolerance by 0.0652; S2 exceeds the tolerance by 0.365; S3 exceeds the tolerance by 0.0651
00418: S1 exceeds the tolerance by 0.0235; S2 exceeds the tolerance by 0.168; S3 exceeds the tolerance by 0.0233
00419: S1 exceeds the tolerance by 0.0423; S2 exceeds the tolerance by 0.223; S3 exceeds the tolerance by 0.0422
00420: S1 exceeds the tolerance by 0.562; S2 exceeds the tolerance by 0.589; S3 exceeds the tolerance by 0.0895
00421: S1 exceeds the tolerance by 0.404; S2 exceeds the tolerance by 0.465; S3 exceeds the tolerance by 0.165
00422: S1 exceeds the tolerance by 0.497; S2 exceeds the tolerance by 0.562; S3 exceeds the tolerance by 0.0944
00423: S1 exceeds the tolerance by 0.562; S2 exceeds the tolerance by 0.451; S3 exceeds the tolerance by 0.291
00424: S1 exceeds the tolerance by 0.202; S2 exceeds the tolerance by 0.227; S3 exceeds the tolerance by 0.0883
00425: S1 exceeds the tolerance by 0.107; S2 exceeds the tolerance by 0.177; S3 exceeds the tolerance by 0.0364
00426: S1 exceeds the tolerance by 0.163; S2 exceeds the tolerance by 0.926; S3 exceeds the tolerance by 0.162
00427: S1 exceeds the tolerance by 0.922; S2 exceeds the tolerance by 0.526; S3 exceeds the tolerance by 0.388
00428: S1 exceeds the tolerance by 0.51; S2 exceeds the tolerance by 0.338; S3 exceeds the tolerance by 0.483
00429: S1 exceeds the tolerance by 0.00317; S2 exceeds the tolerance by 0.0013; S3 exceeds the tolerance by 0.0013; S4 exceeds the tolerance by 0.0013
00430: S1 exceeds the tolerance by 0.000601; S2 exceeds the tolerance by 0.000255; S3 exceeds the tolerance by 0.000255; S4 exceeds the tolerance by 0.00106
00431: S1 exceeds the tolerance by 0.0522; S2 exceeds the tolerance by 0.0195; S3 exceeds the tolerance by 0.0194; S4 exceeds the tolerance by 0.104
00432: S1 exceeds the tolerance by 0.206; S2 exceeds the tolerance by 0.999; S3 exceeds the tolerance by 0.206
00433: S1 exceeds the tolerance by 0.055; S2 exceeds the tolerance by 0.29
00434: S1 exceeds the tolerance by 0.0917; S2 exceeds the tolerance by 0.899
00435: S1 exceeds the tolerance by 0.671; S2 exceeds the tolerance by 0.999; S3 exceeds the tolerance by 0.169
00436: S1 exceeds the tolerance by 0.0514; S2 exceeds the tolerance by 0.282
00437: S1 exceeds the tolerance by 0.0758; S2 exceeds the tolerance by 0.899
00438: S1 exceeds the tolerance by 0.681; S2 exceeds the tolerance by 0.499; S3 exceeds the tolerance by 0.982
00439: S1 exceeds the tolerance by 0.656; S2 exceeds the tolerance by 0.267
00440: S1 exceeds the tolerance by 0.763; S2 exceeds the tolerance by 0.499
00441: S1 exceeds the tolerance by 0.116; S2 exceeds the tolerance by 0.0407; S3 exceeds the tolerance by 0.0407
00442: S1 exceeds the tolerance by 0.000115; S2 exceeds the tolerance by 5.81e-05; S3 exceeds the tolerance by 0.000111
00443: S1 exceeds the tolerance by 0.00119; S2 exceeds the tolerance by 0.000666; S3 exceeds the tolerance by 0.00169
00444: S1 exceeds the tolerance by 0.0481; S2 exceeds the tolerance by 0.441; S3 exceeds the tolerance by 0.048
00446: S1 exceeds the tolerance by 0.08; S2 exceeds the tolerance by 0.389; S3 exceeds the tolerance by 0.0799
00447: S1 exceeds the tolerance by 0.0107; S2 exceeds the tolerance by 0.00362; S3 exceeds the tolerance by 0.00724; S4 exceeds the tolerance by 0.00264
00449: S1 exceeds the tolerance by 0.000115; S2 exceeds the tolerance by 4.03e-05; S3 exceeds the tolerance by 4.03e-05; S4 exceeds the tolerance by 2.37e-05
00450: S1 exceeds the tolerance by 0.269; S2 exceeds the tolerance by 1.37; S3 exceeds the tolerance by 0.554
00452: S1 exceeds the tolerance by 0.577; S2 exceeds the tolerance by 0.258; S3 exceeds the tolerance by 0.401
00453: S1 exceeds the tolerance by 0.0785; S2 exceeds the tolerance by 0.438; S3 exceeds the tolerance by 0.0783
00454: S1 exceeds the tolerance by 0.589; S2 exceeds the tolerance by 0.594; S3 exceeds the tolerance by 0.14
00455: S1 exceeds the tolerance by 0.571; S2 exceeds the tolerance by 0.239; S3 exceeds the tolerance by 0.344
00456: S1 exceeds the tolerance by 1.28; S2 exceeds the tolerance by 0.586; S3 exceeds the tolerance by 0.685
00457: S1 exceeds the tolerance by 1.01; S2 exceeds the tolerance by 0.554; S3 exceeds the tolerance by 0.375
00458: S1 exceeds the tolerance by 0.996; S2 exceeds the tolerance by 0.498; S3 exceeds the tolerance by 1.29
00459: S1 exceeds the tolerance by 1.28; S2 exceeds the tolerance by 0.586; S3 exceeds the tolerance by 0.685
00460: S1 exceeds the tolerance by 1.01; S2 exceeds the tolerance by 0.554; S3 exceeds the tolerance by 0.375
00461: S1 exceeds the tolerance by 0.996; S2 exceeds the tolerance by 0.498; S3 exceeds the tolerance by 1.29
00619: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00620: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00621: S2 exceeds the tolerance by 0.399; S3 exceeds the tolerance by 0.299
00622: S2 exceeds the tolerance by 0.228; S3 exceeds the tolerance by 0.171
00623: S2 exceeds the tolerance by 0.749; S3 exceeds the tolerance by 0.561
00624: S2 exceeds the tolerance by 0.491; S3 exceeds the tolerance by 0.368
00634: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00635: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00636: S2 exceeds the tolerance by 0.399; S3 exceeds the tolerance by 0.299
00637: S2 exceeds the tolerance by 0.228; S3 exceeds the tolerance by 0.171
00638: S2 exceeds the tolerance by 0.749; S3 exceeds the tolerance by 0.561
00639: S2 exceeds the tolerance by 0.491; S3 exceeds the tolerance by 0.368
00646: S2 exceeds the tolerance by 0.399
00647: S1 exceeds the tolerance by 0.129; S2 exceeds the tolerance by 0.979; S3 exceeds the tolerance by 0.129
00648: S2 exceeds the tolerance by 0.99
00649: S2 exceeds the tolerance by 0.466
00650: S1 exceeds the tolerance by 0.0495; S2 exceeds the tolerance by 1.37; S3 exceeds the tolerance by 0.0492
00651: S2 exceeds the tolerance by 1.29
00652: S1 exceeds the tolerance by 4.37e-06; S2 exceeds the tolerance by 4.37e-06; S3 exceeds the tolerance by 4.77e-06; S4 exceeds the tolerance by 6.56e-06
00653: S1 exceeds the tolerance by 4.78e-06; S2 exceeds the tolerance by 4.78e-06; S3 exceeds the tolerance by 4.67e-06; S4 exceeds the tolerance by 7.18e-06
00654: S1 exceeds the tolerance by 4.67e-06; S2 exceeds the tolerance by 4.67e-06; S3 exceeds the tolerance by 4.67e-06; S4 exceeds the tolerance by 7.02e-06
00655: S1 exceeds the tolerance by 7.34e-06; S2 exceeds the tolerance by 7.34e-06; S3 exceeds the tolerance by 7.34e-06; S4 exceeds the tolerance by 1.1e-05
00656: S1 exceeds the tolerance by 7.77e-06; S2 exceeds the tolerance by 7.77e-06; S3 exceeds the tolerance by 8.02e-06; S4 exceeds the tolerance by 1.17e-05
00657: S1 exceeds the tolerance by 6.66e-06; S2 exceeds the tolerance by 6.66e-06; S3 exceeds the tolerance by 6.58e-06; S4 exceeds the tolerance by 1e-05
00679: S2 exceeds the tolerance by 2.12; S3 exceeds the tolerance by 1.59
00680: S2 exceeds the tolerance by 0.511; S3 exceeds the tolerance by 0.383
00681: S2 exceeds the tolerance by 6.75; S3 exceeds the tolerance by 5.06
00682: S2 exceeds the tolerance by 0.925; S3 exceeds the tolerance by 0.694
00683: S2 exceeds the tolerance by 1.03; S3 exceeds the tolerance by 0.77
00684: S1 exceeds the tolerance by 1.34; S2 exceeds the tolerance by 6.57; S3 exceeds the tolerance by 4.93
00689: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00690: S2 exceeds the tolerance by 0.228; S3 exceeds the tolerance by 0.171
00700: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00702: S2 exceeds the tolerance by 0.228; S3 exceeds the tolerance by 0.171
00707: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00708: S2 exceeds the tolerance by 0.491; S3 exceeds the tolerance by 0.368
00723: S2 exceeds the tolerance by 1.99
00724: S1 exceeds the tolerance by 0.0493; S2 exceeds the tolerance by 1.37; S3 exceeds the tolerance by 0.049
00736: S2 exceeds the tolerance by 0.99
00737: S2 exceeds the tolerance by 1.27
00743: S1 exceeds the tolerance by 0.187; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.187
00744: S1 exceeds the tolerance by 0.56; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.179
00745: S1 exceeds the tolerance by 0.582; S2 exceeds the tolerance by 0.285; S3 exceeds the tolerance by 0.752
00746: S1 exceeds the tolerance by 0.108; S2 exceeds the tolerance by 0.029; S3 exceeds the tolerance by 0.029; S4 exceeds the tolerance by 0.029
00747: S1 exceeds the tolerance by 0.000108; S2 exceeds the tolerance by 3.47e-05; S3 exceeds the tolerance by 3.47e-05; S4 exceeds the tolerance by 1.19e-05
00748: S1 exceeds the tolerance by 0.0115; S2 exceeds the tolerance by 0.0067; S3 exceeds the tolerance by 0.0067; S4 exceeds the tolerance by 0.00649
00749: S2 exceeds the tolerance by 0.249; S3 exceeds the tolerance by 0.186
00750: S2 exceeds the tolerance by 0.399; S3 exceeds the tolerance by 0.299
00751: S4 exceeds the tolerance by 0.97
00752: S1 exceeds the tolerance by 0.187; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.186; S4 exceeds the tolerance by 0.89
00753: S1 exceeds the tolerance by 0.136; S2 exceeds the tolerance by 0.591; S3 exceeds the tolerance by 0.136; S4 exceeds the tolerance by 1.05
00754: S1 exceeds the tolerance by 0.0912; S2 exceeds the tolerance by 0.496; S3 exceeds the tolerance by 0.0911
00755: S1 exceeds the tolerance by 0.0912; S2 exceeds the tolerance by 0.496; S3 exceeds the tolerance by 0.0911
00756: S1 exceeds the tolerance by 0.0912; S2 exceeds the tolerance by 0.496; S3 exceeds the tolerance by 0.0911
00757: S1 exceeds the tolerance by 0.549; S2 exceeds the tolerance by 0.618; S3 exceeds the tolerance by 0.127
00758: S1 exceeds the tolerance by 0.549; S2 exceeds the tolerance by 0.618; S3 exceeds the tolerance by 0.127
00759: S1 exceeds the tolerance by 0.587; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.187
00763: S1 exceeds the tolerance by 0.0819; S2 exceeds the tolerance by 0.383; S3 exceeds the tolerance by 0.0818
00764: S1 exceeds the tolerance by 0.583; S2 exceeds the tolerance by 0.616; S3 exceeds the tolerance by 0.13
00765: S1 exceeds the tolerance by 0.6; S2 exceeds the tolerance by 0.278; S3 exceeds the tolerance by 0.646
00766: S1 exceeds the tolerance by 0.00115; S2 exceeds the tolerance by 0.000304; S3 exceeds the tolerance by 0.000304; S4 exceeds the tolerance by 0.000304
00767: S1 exceeds the tolerance by 0.108; S2 exceeds the tolerance by 0.0409; S3 exceeds the tolerance by 0.0409; S4 exceeds the tolerance by 0.0286
00768: S1 exceeds the tolerance by 0.000115; S2 exceeds the tolerance by 7.36e-05; S3 exceeds the tolerance by 7.35e-05; S4 exceeds the tolerance by 6.49e-05
00769: S2 exceeds the tolerance by 0.749; S3 exceeds the tolerance by 0.561
00770: S2 exceeds the tolerance by 0.491; S3 exceeds the tolerance by 0.368
00771: S1 exceeds the tolerance by 0.08; S2 exceeds the tolerance by 0.389; S3 exceeds the tolerance by 0.0799
00772: S1 exceeds the tolerance by 0.08; S2 exceeds the tolerance by 0.389; S3 exceeds the tolerance by 0.0799
00773: S1 exceeds the tolerance by 0.0836; S2 exceeds the tolerance by 0.38; S3 exceeds the tolerance by 0.0835
00774: S1 exceeds the tolerance by 0.586; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.183
00775: S1 exceeds the tolerance by 0.0106; S2 exceeds the tolerance by 0.00393; S3 exceeds the tolerance by 0.00393; S4 exceeds the tolerance by 0.0027
00776: S1 exceeds the tolerance by 0.61; S2 exceeds the tolerance by 0.345; S3 exceeds the tolerance by 0.135
00789: S1 exceeds the tolerance by 0.183; S2 exceeds the tolerance by 0.745; S3 exceeds the tolerance by 0.183
00790: S1 exceeds the tolerance by 0.183; S2 exceeds the tolerance by 0.745; S3 exceeds the tolerance by 0.183
00791: S1 exceeds the tolerance by 0.187; S2 exceeds the tolerance by 0.737; S3 exceeds the tolerance by 0.187
00845: S1 exceeds the tolerance by 0.056; S2 exceeds the tolerance by 0.744
00846: S1 exceeds the tolerance by 0.0742; S2 exceeds the tolerance by 0.997; S3 exceeds the tolerance by 0.102; S4 exceeds the tolerance by 0.635
00847: S1 exceeds the tolerance by 0.0742; S2 exceeds the tolerance by 0.997; S3 exceeds the tolerance by 0.203; S4 exceeds the tolerance by 1.23
00848: S1 exceeds the tolerance by 0.0791; S2 exceeds the tolerance by 1.06
00849: S1 exceeds the tolerance by 0.0803; S2 exceeds the tolerance by 1.22; S3 exceeds the tolerance by 0.0629; S4 exceeds the tolerance by 0.454
00850: S1 exceeds the tolerance by 0.0792; S2 exceeds the tolerance by 1.23; S3 exceeds the tolerance by 0.209; S4 exceeds the tolerance by 1.53
00883: S1 exceeds the tolerance by 0.116; S2 exceeds the tolerance by 0.554; S3 exceeds the tolerance by 0.116
00884: S1 exceeds the tolerance by 0.142; S2 exceeds the tolerance by 0.655; S3 exceeds the tolerance by 0.287
00885: S1 exceeds the tolerance by 0.0278; S2 exceeds the tolerance by 0.00591; S3 exceeds the tolerance by 0.00591; S4 exceeds the tolerance by 0.00511
00886: S1 exceeds the tolerance by 0.084; S2 exceeds the tolerance by 0.406; S3 exceeds the tolerance by 0.0839
00887: S1 exceeds the tolerance by 0.336; S2 exceeds the tolerance by 0.433; S3 exceeds the tolerance by 0.31
00928: S1 exceeds the tolerance by 0.00015; S2 exceeds the tolerance by 0.000149
00930: S1 exceeds the tolerance by 1; S2 exceeds the tolerance by 2; S3 exceeds the tolerance by 3
00931: S1 exceeds the tolerance by 4; S2 exceeds the tolerance by 5; S3 exceeds the tolerance by 6
00933: S1 exceeds the tolerance by 0.873; S2 exceeds the tolerance by 0.786
00934: S1 exceeds the tolerance by 2
00935: S1 exceeds the tolerance by 3; S2 exceeds the tolerance by 1
00944: S1 exceeds the tolerance by 2.86; k1 exceeds the tolerance by 9
00945: S1 exceeds the tolerance by 13.6; C exceeds the tolerance by 9
00946: S1 exceeds the tolerance by 13.6; C exceeds the tolerance by 9
00947: S1 exceeds the tolerance by 1.87; C exceeds the tolerance by 9
00948: S1 exceeds the tolerance by 1.87; C exceeds the tolerance by 9
00952: S exceeds the tolerance by 100
00953: S exceeds the tolerance by 99
00962: S exceeds the tolerance by 100
00963: Q exceeds the tolerance by 9.89; R2 exceeds the tolerance by 9.89
00964: S exceeds the tolerance by 100
00965: S exceeds the tolerance by 100
00966: S exceeds the tolerance by 990
00967: Q exceeds the tolerance by 4.94; R exceeds the tolerance by 4.94
00972: X exceeds the tolerance by 10
00978: x exceeds the tolerance by 5; y exceeds the tolerance by 1; z exceeds the tolerance by 3
00979: x exceeds the tolerance by 2; p exceeds the tolerance by 3; q exceeds the tolerance by 1
00980: x exceeds the tolerance by 2; p exceeds the tolerance by 3; q exceeds the tolerance by 1
00995: p2 exceeds the tolerance by 1
00996: p2 exceeds the tolerance by 1
00997: p1 exceeds the tolerance by 1; p2 exceeds the tolerance by 1
01000: S1 exceeds the tolerance by 17.7; S2 exceeds the tolerance by 258; k3 exceeds the tolerance by 1.42; k4 exceeds the tolerance by 4.39; k5 exceeds the tolerance by 2.24; comp2 exceeds the tolerance by 4.39
01045: S1 exceeds the tolerance by 0.056; S2 exceeds the tolerance by 0.744
01046: S1 exceeds the tolerance by 0.0742; S2 exceeds the tolerance by 0.997; S3 exceeds the tolerance by 0.102; S4 exceeds the tolerance by 0.635
01047: S1 exceeds the tolerance by 0.0742; S2 exceeds the tolerance by 0.997; S3 exceeds the tolerance by 0.203; S4 exceeds the tolerance by 1.23
01048: S1 exceeds the tolerance by 0.0791; S2 exceeds the tolerance by 1.06
01049: S1 exceeds the tolerance by 0.0803; S2 exceeds the tolerance by 1.22; S3 exceeds the tolerance by 0.0629; S4 exceeds the tolerance by 0.454
01050: S1 exceeds the tolerance by 0.0792; S2 exceeds the tolerance by 1.23; S3 exceeds the tolerance by 0.209; S4 exceeds the tolerance by 1.53
01071: S1 exceeds the tolerance by 0.112; S2 exceeds the tolerance by 0.393; S3 exceeds the tolerance by 0.112
01072: S1 exceeds the tolerance by 0.000106; S2 exceeds the tolerance by 3.14e-05; S3 exceeds the tolerance by 6.29e-05; S4 exceeds the tolerance by 1.26e-05
01073: S1 exceeds the tolerance by 0.371; S2 exceeds the tolerance by 0.743; S3 exceeds the tolerance by 0.245
01074: S1 exceeds the tolerance by 0.0504; S2 exceeds the tolerance by 0.209; S3 exceeds the tolerance by 0.0503
01075: S1 exceeds the tolerance by 0.107; S2 exceeds the tolerance by 0.0362; S3 exceeds the tolerance by 0.0724; S4 exceeds the tolerance by 0.0264
01076: S1 exceeds the tolerance by 0.251; S2 exceeds the tolerance by 1.1; S3 exceeds the tolerance by 0.429
01094: S2 exceeds the tolerance by 0.99
01095: S1 exceeds the tolerance by 0.0495; S2 exceeds the tolerance by 1.37; S3 exceeds the tolerance by 0.0492
01106: X exceeds the tolerance by 1
01119: e1 exceeds the tolerance by 2; e2 exceeds the tolerance by 3
01120: S3 exceeds the tolerance by 2
01212: x exceeds the tolerance by 4
01213: x exceeds the tolerance by 4
01214: x exceeds the tolerance by 4
01222: c exceeds the tolerance by 2
01227: S1 exceeds the tolerance by 4.25; k1 exceeds the tolerance by 0.5
01228: S1 exceeds the tolerance by 4.5; k1 exceeds the tolerance by 1
01229: S1 exceeds the tolerance by 4.5; k1 exceeds the tolerance by 1
01230: S1 exceeds the tolerance by 4.5; k1 exceeds the tolerance by 1
01241: p exceeds the tolerance by 2
01242: p exceeds the tolerance by 2
01243: p exceeds the tolerance by 2
01260: p2 exceeds the tolerance by 9
01261: p2 exceeds the tolerance by 5
01262: p2 exceeds the tolerance by 7
01263: p2 exceeds the tolerance by 5
01266: p2 exceeds the tolerance by 9.98
01267: p2 exceeds the tolerance by 5
01268: p2 exceeds the tolerance by 5
01269: p2 exceeds the tolerance by 4
01270: p2 exceeds the tolerance by 7.98
01282: p1 exceeds the tolerance by 1
01284: p1 exceeds the tolerance by 3
01285: p1 exceeds the tolerance by 4
01286: p1 exceeds the tolerance by 15
01287: p1 exceeds the tolerance by 15
01293: p2 exceeds the tolerance by 5
01294: p2 exceeds the tolerance by 7
01295: p2 exceeds the tolerance by 5
01297: p2 exceeds the tolerance by 9.98
01298: p2 exceeds the tolerance by 5
01299: p2 exceeds the tolerance by 5
01303: p1 exceeds the tolerance by 3
01304: p1 exceeds the tolerance by 5
01305: p1 exceeds the tolerance by 5
01324: y exceeds the tolerance by 3.5
01325: y exceeds the tolerance by 5.5
01326: y exceeds the tolerance by 3.5
01327: y exceeds the tolerance by 5.5
01328: x exceeds the tolerance by 6; y exceeds the tolerance by 1
01329: x exceeds the tolerance by 6; y exceeds the tolerance by 7
01330: x exceeds the tolerance by 4; y exceeds the tolerance by 3
01331: x exceeds the tolerance by 4; y exceeds the tolerance by 7
01332: x exceeds the tolerance by 2
01333: x exceeds the tolerance by 4; y exceeds the tolerance by 3
01334: x exceeds the tolerance by 4; y exceeds the tolerance by 7
01335: x exceeds the tolerance by 4
01336: x exceeds the tolerance by 3
01337: x exceeds the tolerance by 3; y exceeds the tolerance by 0.999
01340: S1 exceeds the tolerance by 9; k1 exceeds the tolerance by 2
01444: A exceeds the tolerance by 5
01445: A exceeds the tolerance by 10
01446: A exceeds the tolerance by 5
01447: A exceeds the tolerance by 5; B exceeds the tolerance by 5
01448: A exceeds the tolerance by 10; B exceeds the tolerance by 10
01466: Allsum exceeds the tolerance by 200
01504: S1 exceeds the tolerance by 0.0139; x exceeds the tolerance by 0.0199
01505: C1 exceeds the tolerance by 0.39; S1 exceeds the tolerance by 0.0471; x exceeds the tolerance by 0.351
01506: C1 exceeds the tolerance by 0.39; S1 exceeds the tolerance by 0.0288; x exceeds the tolerance by 0.41
01507: S1 exceeds the tolerance by 0.0363; x exceeds the tolerance by 0.0519
01508: S1 exceeds the tolerance by 0.112; x exceeds the tolerance by 0.16
01509: S1 exceeds the tolerance by 0.14; x exceeds the tolerance by 0.2
01510: S1 exceeds the tolerance by 0.7; x exceeds the tolerance by 1
01511: S1 exceeds the tolerance by 0.0139; x exceeds the tolerance by 0.0199
01512: x2 exceeds the tolerance by 5
01518: P2 exceeds the tolerance by 3
01520: P2 exceeds the tolerance by 3
01521: P2 exceeds the tolerance by 3
01523: P2 exceeds the tolerance by 0.5
01524: P2 exceeds the tolerance by 2.5
01525: P2 exceeds the tolerance by 3
01527: P2 exceeds the tolerance by 3
01528: P2 exceeds the tolerance by 1.5
01529: P2 exceeds the tolerance by 3.5
01530: P0 exceeds the tolerance by 2.72; P1 exceeds the tolerance by 15.2; P2 exceeds the tolerance by 1; P3 exceeds the tolerance by 1; P4 exceeds the tolerance by 3.14; P5 exceeds the tolerance by 1.05; P6 exceeds the tolerance by 1.57; P7 exceeds the tolerance by 0.523; P8 exceeds the tolerance by 1.23; P9 exceeds the tolerance by 1.43; P10 exceeds the tolerance by 1; P11 exceeds the tolerance by 4; P12 exceeds the tolerance by 4; P13 exceeds the tolerance by 0.948; P14 exceeds the tolerance by 0.976; P15 exceeds the tolerance by 1; P16 exceeds the tolerance by 2.72; P17 exceeds the tolerance by 2.16; P18 exceeds the tolerance by 5; P19 exceeds the tolerance by 9; P20 exceeds the tolerance by 1.61; P22 exceeds the tolerance by 0.699; P24 exceeds the tolerance by 1; P25 exceeds the tolerance by 4; P26 exceeds the tolerance by 5.56; P27 exceeds the tolerance by 16; P28 exceeds the tolerance by 9.61; P29 exceeds the tolerance by 2; P30 exceeds the tolerance by 2.72; P31 exceeds the tolerance by 0.863; P33 exceeds the tolerance by 0.374; P35 exceeds the tolerance by 2.01; P36 exceeds the tolerance by 0.291; P37 exceeds the tolerance by 1.14; P38 exceeds the tolerance by 1.02; P39 exceeds the tolerance by 4.93; P40 exceeds the tolerance by 0.304; P41 exceeds the tolerance by 2.83; P42 exceeds the tolerance by 1.12; P43 exceeds the tolerance by 1.14; P44 exceeds the tolerance by 1.47; P45 exceeds the tolerance by 5.29; P46 exceeds the tolerance by 0.803; P47 exceeds the tolerance by 0.867; P48 exceeds the tolerance by 1.51; P49 exceeds the tolerance by 5.3; P52 exceeds the tolerance by 1
01531: P0 exceeds the tolerance by 2; P1 exceeds the tolerance by 2; P2 exceeds the tolerance by 2; P3 exceeds the tolerance by 2; P4 exceeds the tolerance by 2; P5 exceeds the tolerance by 2; P6 exceeds the tolerance by 2; P7 exceeds the tolerance by 2; P8 exceeds the tolerance by 2; P9 exceeds the tolerance by 2; P10 exceeds the tolerance by 2; P11 exceeds the tolerance by 2; P12 exceeds the tolerance by 2; P13 exceeds the tolerance by 2; P14 exceeds the tolerance by 2; P15 exceeds the tolerance by 2; P16 exceeds the tolerance by 2; P17 exceeds the tolerance by 2; P18 exceeds the tolerance by 2; P19 exceeds the tolerance by 2; P20 exceeds the tolerance by 2; P21 exceeds the tolerance by 2; P22 exceeds the tolerance by 2; P23 exceeds the tolerance by 2; P24 exceeds the tolerance by 2; P25 exceeds the tolerance by 2; P26 exceeds the tolerance by 2; P27 exceeds the tolerance by 2; P28 exceeds the tolerance by 2; P29 exceeds the tolerance by 2; P30 exceeds the tolerance by 2; P31 exceeds the tolerance by 2; P32 exceeds the tolerance by 2; P33 exceeds the tolerance by 2; P34 exceeds the tolerance by 2; P35 exceeds the tolerance by 2; P36 exceeds the tolerance by 2; P37 exceeds the tolerance by 2; P38 exceeds the tolerance by 2; P39 exceeds the tolerance by 2; P40 exceeds the tolerance by 2; P41 exceeds the tolerance by 2; P42 exceeds the tolerance by 2; P43 exceeds the tolerance by 2; P44 exceeds the tolerance by 2; P45 exceeds the tolerance by 2; P46 exceeds the tolerance by 2; P47 exceeds the tolerance by 2; P48 exceeds the tolerance by 2; P49 exceeds the tolerance by 2; P50 exceeds the tolerance by 2; P51 exceeds the tolerance by 2; P52 exceeds the tolerance by 2; P53 exceeds the tolerance by 2; P54 exceeds the tolerance by 2; P55 exceeds the tolerance by 2
01532: P0 exceeds the tolerance by 2; P1 exceeds the tolerance by 2; P2 exceeds the tolerance by 2; P3 exceeds the tolerance by 2; P4 exceeds the tolerance by 2; P5 exceeds the tolerance by 2; P6 exceeds the tolerance by 2; P7 exceeds the tolerance by 2; P8 exceeds the tolerance by 2; P9 exceeds the tolerance by 2; P10 exceeds the tolerance by 2; P11 exceeds the tolerance by 2; P12 exceeds the tolerance by 2; P13 exceeds the tolerance by 2; P14 exceeds the tolerance by 2; P15 exceeds the tolerance by 2; P16 exceeds the tolerance by 2; P17 exceeds the tolerance by 2; P18 exceeds the tolerance by 2; P19 exceeds the tolerance by 2; P20 exceeds the tolerance by 2; P21 exceeds the tolerance by 2; P22 exceeds the tolerance by 2; P23 exceeds the tolerance by 2; P24 exceeds the tolerance by 2; P25 exceeds the tolerance by 2; P26 exceeds the tolerance by 2; P27 exceeds the tolerance by 2; P28 exceeds the tolerance by 2; P29 exceeds the tolerance by 2; P30 exceeds the tolerance by 2; P31 exceeds the tolerance by 2; P32 exceeds the tolerance by 2; P33 exceeds the tolerance by 2; P34 exceeds the tolerance by 2; P35 exceeds the tolerance by 2; P36 exceeds the tolerance by 2; P37 exceeds the tolerance by 2; P38 exceeds the tolerance by 2; P39 exceeds the tolerance by 2; P40 exceeds the tolerance by 2; P41 exceeds the tolerance by 2; P42 exceeds the tolerance by 2; P43 exceeds the tolerance by 2; P44 exceeds the tolerance by 2; P45 exceeds the tolerance by 2; P46 exceeds the tolerance by 2; P47 exceeds the tolerance by 2; P48 exceeds the tolerance by 2; P49 exceeds the tolerance by 2; P50 exceeds the tolerance by 2; P51 exceeds the tolerance by 2; P52 exceeds the tolerance by 2
01533: P0 exceeds the tolerance by 3; P1 exceeds the tolerance by 3; P2 exceeds the tolerance by 3; P3 exceeds the tolerance by 3; P4 exceeds the tolerance by 3; P5 exceeds the tolerance by 3; P6 exceeds the tolerance by 3; P7 exceeds the tolerance by 2; P8 exceeds the tolerance by 3; P9 exceeds the tolerance by 2; P10 exceeds the tolerance by 3; P11 exceeds the tolerance by 3; P12 exceeds the tolerance by 2; P13 exceeds the tolerance by 2; P14 exceeds the tolerance by 3; P15 exceeds the tolerance by 3; P16 exceeds the tolerance by 3; P17 exceeds the tolerance by 3; P18 exceeds the tolerance by 2; P19 exceeds the tolerance by 3; P20 exceeds the tolerance by 2; P21 exceeds the tolerance by 2; P22 exceeds the tolerance by 2; P23 exceeds the tolerance by 2; P24 exceeds the tolerance by 3; P25 exceeds the tolerance by 3; P26 exceeds the tolerance by 3; P27 exceeds the tolerance by 3; P28 exceeds the tolerance by 3; P29 exceeds the tolerance by 3; P30 exceeds the tolerance by 3; P31 exceeds the tolerance by 3; P32 exceeds the tolerance by 2; P33 exceeds the tolerance by 2; P34 exceeds the tolerance by 2; P35 exceeds the tolerance by 3; P36 exceeds the tolerance by 2; P37 exceeds the tolerance by 3; P38 exceeds the tolerance by 2; P39 exceeds the tolerance by 3; P40 exceeds the tolerance by 2; P41 exceeds the tolerance by 3; P42 exceeds the tolerance by 3; P43 exceeds the tolerance by 3; P44 exceeds the tolerance by 2; P45 exceeds the tolerance by 3; P46 exceeds the tolerance by 3; P47 exceeds the tolerance by 2; P48 exceeds the tolerance by 3; P49 exceeds the tolerance by 3; P50 exceeds the tolerance by 2; P51 exceeds the tolerance by 3; P52 exceeds the tolerance by 2
01536: S1 exceeds the tolerance by 7
01580: P1 exceeds the tolerance by 2; S1 exceeds the tolerance by 0.7
01583: S1 exceeds the tolerance by 1.1
01584: P1 exceeds the tolerance by 2; S1 exceeds the tolerance by 0.9
01586: P1 exceeds the tolerance by 4.5; S1 exceeds the tolerance by 2.02
01588: S exceeds the tolerance by 100
01590: S exceeds the tolerance by 99.8
01591: S exceeds the tolerance by 99.8
01592: S exceeds the tolerance by 99.8
01599: S exceeds the tolerance by 99.8
01601: P2 exceeds the tolerance by 2
01603: P2 exceeds the tolerance by 4.5
01604: P1 exceeds the tolerance by 4.5
01605: S exceeds the tolerance by 99.8
01626: S exceeds the tolerance by 99.8
01627: S exceeds the tolerance by 99.8
01658: p1 exceeds the tolerance by 2
01659: p1 exceeds the tolerance by 2
01660: p1 exceeds the tolerance by 2
01662: p1 exceeds the tolerance by 2
01663: p1 exceeds the tolerance by 4
01664: p1 exceeds the tolerance by 6.02e+23
01669: S1 exceeds the tolerance by 0.225; S2 exceeds the tolerance by 0.135
01670: S1 exceeds the tolerance by 0.225; S2 exceeds the tolerance by 0.0446
01671: S1 exceeds the tolerance by 0.135; S2 exceeds the tolerance by 0.135
01672: S1 exceeds the tolerance by 0.313; S2 exceeds the tolerance by 0.188
01673: S1 exceeds the tolerance by 0.313; S2 exceeds the tolerance by 0.0623
01674: S1 exceeds the tolerance by 0.191; S2 exceeds the tolerance by 0.191
01675: S1 exceeds the tolerance by 4.17; S2 exceeds the tolerance by 0.102
01676: S1 exceeds the tolerance by 4.17; S2 exceeds the tolerance by 0.0336
01677: S1 exceeds the tolerance by 4.14; S2 exceeds the tolerance by 0.889
01681: S1 exceeds the tolerance by 2.17; S2 exceeds the tolerance by 0.894
01682: S1 exceeds the tolerance by 2.17; S2 exceeds the tolerance by 0.964
01683: S1 exceeds the tolerance by 2.17; S2 exceeds the tolerance by 0.894
01684: S1 exceeds the tolerance by 1; S2 exceeds the tolerance by 3
01685: S1 exceeds the tolerance by 1; S2 exceeds the tolerance by 3
01686: S1 exceeds the tolerance by 1; S2 exceeds the tolerance by 3
01687: S2 exceeds the tolerance by 1.33
01688: S2 exceeds the tolerance by 1.22
01689: S1 exceeds the tolerance by 1.37
01690: S2 exceeds the tolerance by 1.43
01691: S2 exceeds the tolerance by 1.32
01692: S1 exceeds the tolerance by 1.43
01693: P1 exceeds the tolerance by 2
01694: P1 exceeds the tolerance by 2
01695: P1 exceeds the tolerance by 2
01696: P1 exceeds the tolerance by 2
01697: P1 exceeds the tolerance by 2
01698: P1 exceeds the tolerance by 2
01699: P1 exceeds the tolerance by 2
01701: P1 exceeds the tolerance by 10
01702: P1 exceeds the tolerance by 9
01703: S1 exceeds the tolerance by 7.7
01705: S1 exceeds the tolerance by 2.5
01706: S1 exceeds the tolerance by 3
01707: S1 exceeds the tolerance by 1
01708: P1 exceeds the tolerance by 8.5
01709: P1 exceeds the tolerance by 6.5
01710: k1 exceeds the tolerance by 8.5
01713: k1 exceeds the tolerance by 3
01714: k1 exceeds the tolerance by 3
01715: k1 exceeds the tolerance by 1.1
01716: k1 exceeds the tolerance by 6.9
01717: P1 exceeds the tolerance by 3
01719: P1 exceeds the tolerance by 3
01720: P1 exceeds the tolerance by 3.5
01721: P1 exceeds the tolerance by 5.5
01754: P1 exceeds the tolerance by 1.5
01755: P1 exceeds the tolerance by 1.5
01756: P1 exceeds the tolerance by 3.5
01757: P1 exceeds the tolerance by 23.5
01758: P1 exceeds the tolerance by 1.5
01759: P1 exceeds the tolerance by 2.5
01769: k0 exceeds the tolerance by 4
01770: k0 exceeds the tolerance by 4
01771: k0 exceeds the tolerance by 4
01772: k0 exceeds the tolerance by 4
01779: C1 exceeds the tolerance by 0.3; S1 exceeds the tolerance by 0.9; x exceeds the tolerance by 1.5
01780: C1 exceeds the tolerance by 0.3; S1 exceeds the tolerance by 0.9; x exceeds the tolerance by 1.5
```

**100 cases**

```text
00039: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * k1 + S1 + S2)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00040: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * k2 + S1 + S2)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00182: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * k1 + S1 + S2)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00184: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S1 + S2 + -1 dimensionless * k1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00531: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 - T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00532: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * S1 + T + X0 + X1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00533: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k2 + -0.9 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00534: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k2 + -1 dimensionless * k3 + -0.2 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00535: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S4 + -1 dimensionless * S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00536: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k1 + -0.1 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00537: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k2 + -0.2 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00538: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k2 + -0.25 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00539: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (C + -1 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00540: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (C + -1 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00541: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (C + -1 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00542: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (C + -1 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00543: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00544: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (C + -1 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00545: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (C + -1 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00546: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S4 + -1 dimensionless * S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00547: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (C + -2.5 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00548: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (C + -0.75 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00549: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00550: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00551: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00552: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S4 + -1 dimensionless * S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00553: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S4 + -1 dimensionless * S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00554: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S4 + -1 dimensionless * S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00555: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + S2 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00556: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * S1 + S4 + -1 dimensionless * S5)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00557: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00558: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00559: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S4 + -1 dimensionless * S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00560: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S4 + -1 dimensionless * S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00565: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00566: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S4 + -1 dimensionless * S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00567: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00568: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * S1 + T + X0 + X1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00569: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k2 + -1 dimensionless * 0.9 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00570: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k2 + -1 dimensionless * k3 + -0.2 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00571: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00572: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (X0 + X1 + T + -1 dimensionless * S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00573: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * p4 + -1 dimensionless * p3)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00574: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (p1 + p2 + p3 + -1 dimensionless * p4)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00575: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k2 + -0.9 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00576: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (p4 + -1 dimensionless * p1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00613: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00614: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00615: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00628: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00629: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00630: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00658: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * k1 + S1 + S2)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00659: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * k1 + S1 + S2)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00660: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * k1 + S1 + S2)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00661: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * S1 + T + X0 + X1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00662: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00663: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k2 + -0.9 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00664: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k2 + -0.9 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00665: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * S1 + T + X0 + X1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00666: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00673: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00674: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00675: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00687: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00695: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00696: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00705: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00760: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * S1 + T + X0 + X1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00761: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S1 * (1 dimensionless + k3) + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00762: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k2 + -1 dimensionless * 0.9 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00777: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k2 + -2.5 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00778: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * S1 + T + X0 + X1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00779: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * S1 + T + X0 + X1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00780: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (-1 dimensionless * S1 + T + X0 + X1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00844: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (kf + -0.75 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
00876: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S4 + -1 dimensionless * S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01044: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (kf + -0.75 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01054: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S4 + -1 dimensionless * S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01083: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01084: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - ((k3 + 1 dimensionless) * S1 + -1 dimensionless * T)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01085: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S4 + -1 dimensionless * S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01086: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (S4 + -1 dimensionless * S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01108: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (X - p1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01292: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (p1 - true)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01479: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula ' 1e23 dimensionless - P1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01482: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (2 dimensionless - P1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01483: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula ' C) * J0 - P1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01484: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (P1 - S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01499: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (P0 - S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01500: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (P0 - S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01501: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (P0 - S1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01502: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (P2 - abs(-1 dimensionless))' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01503: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (P1 - 0 dimensionless)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01575: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k1 - k2)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01576: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k1 - k2)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01577: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (10 dimensionless - k1 - k2)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01578: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (10 dimensionless - k1)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01579: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (k1 - k2)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
01589: SimulationFailure: roadrunner: RuntimeError: Unable to support algebraic rules.  The formula '0 = 0 dimensionless - (Q + R - S)' is not supported., at rrllvm::LLVMModelDataSymbols::LLVMModelDataSymbols(const libsbml::Model*, unsigned int)
```

**2 cases**

```text
01820: CompareError: duplicate column names in the simulation result
01821: CompareError: duplicate column names in the simulation result
```

The test tags of the cases with a numerical mismatch:

| tags | cases | ids |
| --- | --- | --- |
| Amount | 69 | 00026, 00041, 00071, 00072, 00073, 00074, 00348, 00349, 00350, 00351, 00352, 00353, 00354, 00355, 00356, 00357, 00358, 00359, 00360, 00361, 00363, 00364, 00366, 00367, 00399, 00400, 00401, 00405, 00407, 00408, 00409, 00410, 00411, 00412, 00415, 00416, 00417, 00418, 00423, 00424, 00620, 00623, 00638, 00646, 00647, 00648, 00649, 00650, 00651, 00654, 00657, 00751, 00752, 00753, 00754, 00773, 00774, 00775, 00791, 00845, 00846, 00847, 00848, 00883, 00884, 00885, 00886, 00930, 00931 |
| NonConstantParameter | 26 | 00172, 00396, 00397, 00398, 00402, 00403, 00404, 00453, 00455, 00979, 01119, 01214, 01260, 01262, 01263, 01266, 01267, 01268, 01303, 01304, 01305, 01521, 01658, 01659, 01662, 01664 |
| Amount, InitialValueReassigned | 19 | 00619, 00621, 00622, 00624, 00634, 00635, 00636, 00637, 00639, 00652, 00653, 00655, 00656, 00755, 00756, 00771, 00772, 00789, 00790 |
| Amount, BoundaryCondition | 17 | 00375, 00376, 00377, 00378, 00379, 00380, 00381, 00382, 00383, 00432, 00433, 00434, 00436, 00437, 00438, 00439, 00440 |
| Concentration, NonUnityCompartment | 14 | 00374, 00743, 00744, 00745, 00746, 00747, 00748, 00749, 00763, 00765, 00766, 00767, 00768, 00769 |
| Amount, EventIsPersistent | 13 | 00406, 00413, 00414, 00420, 00421, 00757, 00758, 00759, 00776, 00850, 00887, 00933, 00934 |
| Amount, NonConstantParameter | 13 | 00944, 01227, 01228, 01229, 01230, 01269, 01270, 01293, 01294, 01295, 01297, 01298, 01299 |
| Amount, NonUnityCompartment | 12 | 00369, 00370, 00371, 00372, 00373, 00426, 00428, 00429, 00430, 00431, 00680, 00683 |
| EventT0Firing, NonConstantParameter | 12 | 00995, 00996, 00997, 01332, 01335, 01527, 01663, 01693, 01694, 01695, 01696, 01697 |
| Amount, ConversionFactors | 9 | 01669, 01670, 01671, 01672, 01673, 01674, 01681, 01682, 01683 |
| Amount, LocalParameters | 9 | 00389, 00392, 00395, 00446, 00449, 00452, 00707, 00736, 00737 |
| Amount, AssignedConstantStoichiometry, InitialValueReassigned, NonUnityStoichiometry | 8 | 01071, 01072, 01073, 01074, 01075, 01076, 01094, 01095 |
| EventUsesTriggerTimeValues, NonConstantParameter | 8 | 00459, 00460, 00461, 01324, 01328, 01330, 01528, 01701 |
| Amount, NonUnityStoichiometry | 7 | 00387, 00390, 00393, 00444, 00447, 00723, 00724 |
| EventUsesAssignmentTimeValues, NonConstantParameter | 7 | 00980, 01325, 01329, 01331, 01529, 01604, 01702 |
| NonConstantParameter, UncommonMathML | 6 | 01212, 01213, 01530, 01531, 01532, 01533 |
| 0D-Compartment, Amount | 5 | 00362, 00365, 00368, 00419, 00425 |
| Amount, AssignedVariableStoichiometry, InitialValueReassigned, NonUnityStoichiometry | 5 | 01444, 01445, 01446, 01447, 01448 |
| Amount, BoundaryCondition, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, VolumeConcentrationRates | 5 | 01504, 01505, 01506, 01507, 01512 |
| Amount, ConstantSpecies | 5 | 00384, 00385, 00386, 00441, 00443 |
| Amount, HasOnlySubstanceUnits, LocalParameters, NonConstantParameter, NonUnityCompartment, NonUnityStoichiometry, SpeciesReferenceInMath | 4 | 01769, 01770, 01771, 01772 |
| Amount, InitialValueReassigned, NonUnityCompartment | 4 | 00679, 00681, 00682, 00684 |
| Amount, ReversibleReaction | 4 | 01045, 01046, 01047, 01048 |
| Concentration, InitialValueReassigned, NonUnityCompartment | 4 | 00689, 00690, 00750, 00770 |
| EventIsPersistent, NonConstantParameter | 4 | 00454, 01525, 01660, 01759 |
| Amount, ConversionFactors, EventIsPersistent | 3 | 01675, 01676, 01677 |
| Amount, ConversionFactors, EventT0Firing | 3 | 01684, 01685, 01686 |
| Amount, ConversionFactors, EventUsesAssignmentTimeValues | 3 | 01690, 01691, 01692 |
| Amount, ConversionFactors, EventUsesTriggerTimeValues | 3 | 01687, 01688, 01689 |
| Amount, EventUsesTriggerTimeValues | 3 | 00456, 00457, 00458 |
| BoolNumericSwap, NonConstantParameter | 3 | 01285, 01286, 01287 |
| EventIsNotPersistent, NonConstantParameter, RandomEventExecution | 3 | 00952, 00962, 00964 |
| NoMathML, NonConstantParameter | 3 | 01241, 01242, 01243 |
| Amount, BoundaryCondition, InitialValueReassigned | 2 | 00700, 00702 |
| Amount, BoundaryCondition, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment | 2 | 01779, 01780 |
| Amount, EventUsesTriggerTimeValues, ReversibleReaction | 2 | 00849, 01049 |
| EventIsNotPersistent, EventIsPersistent, EventUsesTriggerTimeValues, NonConstantParameter, RandomEventExecution | 2 | 00965, 00966 |
| EventIsNotPersistent, InitialValueReassigned, NonConstantParameter, RandomEventExecution | 2 | 01588, 01591 |
| EventIsNotPersistent, NonConstantParameter | 2 | 00963, 00967 |
| EventIsPersistent, EventT0Firing, NonConstantParameter | 2 | 01337, 01758 |
| EventT0Firing, InitialValueReassigned, NonConstantParameter | 2 | 01698, 01699 |
| 0D-Compartment, Amount, EventIsPersistent | 1 | 00422 |
| Amount, AssignedConstantStoichiometry, AssignedVariableStoichiometry, BoundaryCondition, ConstantSpecies, ConversionFactors, EventIsNotPersistent, EventIsPersistent, EventT0Firing, EventUsesAssignmentTimeValues, EventUsesTriggerTimeValues, HasOnlySubstanceUnits, InitialValueReassigned, LocalParameters, MultiCompartment, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, NonUnityStoichiometry, ReversibleReaction, SpeciesReferenceInMath | 1 | 01000 |
| Amount, AssignedVariableStoichiometry, DelayInEventAssignment, NonConstantParameter, NonUnityStoichiometry | 1 | 01536 |
| Amount, AssignedVariableStoichiometry, EventIsPersistent, InitialValueReassigned, NonConstantParameter, NonUnityStoichiometry | 1 | 01580 |
| Amount, AssignedVariableStoichiometry, EventIsPersistent, NonConstantParameter, NonUnityStoichiometry, SpeciesReferenceInMath | 1 | 01717 |
| Amount, AssignedVariableStoichiometry, EventT0Firing, NonConstantParameter, NonUnityStoichiometry, SpeciesReferenceInMath | 1 | 01719 |
| Amount, AssignedVariableStoichiometry, EventUsesAssignmentTimeValues, InitialValueReassigned, NonConstantParameter, NonUnityStoichiometry | 1 | 01586 |
| Amount, AssignedVariableStoichiometry, EventUsesAssignmentTimeValues, NonConstantParameter, NonUnityStoichiometry, SpeciesReferenceInMath | 1 | 01721 |
| Amount, AssignedVariableStoichiometry, EventUsesTriggerTimeValues, InitialValueReassigned, NonConstantParameter, NonUnityStoichiometry | 1 | 01584 |
| Amount, AssignedVariableStoichiometry, EventUsesTriggerTimeValues, NonConstantParameter, NonUnityStoichiometry, SpeciesReferenceInMath | 1 | 01720 |
| Amount, AssignedVariableStoichiometry, InitialValueReassigned, NonConstantParameter, NonUnityStoichiometry | 1 | 01106 |
| Amount, AssignedVariableStoichiometry, NonConstantParameter, NonUnityStoichiometry | 1 | 01583 |
| Amount, AssignedVariableStoichiometry, NonUnityStoichiometry | 1 | 00972 |
| Amount, BoundaryCondition, EventIsPersistent | 1 | 00435 |
| Amount, BoundaryCondition, EventIsPersistent, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, VolumeConcentrationRates | 1 | 01511 |
| Amount, BoundaryCondition, EventT0Firing, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, VolumeConcentrationRates | 1 | 01510 |
| Amount, BoundaryCondition, EventUsesAssignmentTimeValues, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, VolumeConcentrationRates | 1 | 01509 |
| Amount, BoundaryCondition, EventUsesTriggerTimeValues, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, VolumeConcentrationRates | 1 | 01508 |
| Amount, BoundaryCondition, HasOnlySubstanceUnits, NonConstantCompartment, NonUnityCompartment | 1 | 01222 |
| Amount, BoundaryCondition, HasOnlySubstanceUnits, NonUnityCompartment | 1 | 01705 |
| Amount, ConstantSpecies, EventIsPersistent | 1 | 00442 |
| Amount, EventIsNotPersistent, EventIsPersistent | 1 | 00935 |
| Amount, EventIsPersistent, HasOnlySubstanceUnits, LocalParameters, NonConstantParameter | 1 | 01710 |
| Amount, EventIsPersistent, HasOnlySubstanceUnits, NonUnityCompartment | 1 | 01703 |
| Amount, EventIsPersistent, NonUnityCompartment | 1 | 00427 |
| Amount, EventIsPersistent, NonUnityStoichiometry | 1 | 00450 |
| Amount, EventIsPersistent, ReversibleReaction | 1 | 01050 |
| Amount, EventT0Firing | 1 | 00928 |
| Amount, EventT0Firing, HasOnlySubstanceUnits, NonConstantCompartment, NonUnityCompartment | 1 | 01120 |
| Amount, EventT0Firing, LocalParameters, NonConstantParameter | 1 | 01713 |
| Amount, EventUsesAssignmentTimeValues, HasOnlySubstanceUnits, NonConstantParameter, NonUnityCompartment | 1 | 01709 |
| Amount, EventUsesAssignmentTimeValues, HasOnlySubstanceUnits, NonUnityCompartment | 1 | 01707 |
| Amount, EventUsesAssignmentTimeValues, LocalParameters, NonConstantParameter | 1 | 01716 |
| Amount, EventUsesAssignmentTimeValues, NonConstantParameter | 1 | 01327 |
| Amount, EventUsesTriggerTimeValues, HasOnlySubstanceUnits, NonConstantParameter, NonUnityCompartment | 1 | 01708 |
| Amount, EventUsesTriggerTimeValues, HasOnlySubstanceUnits, NonUnityCompartment | 1 | 01706 |
| Amount, EventUsesTriggerTimeValues, LocalParameters, NonConstantParameter | 1 | 01715 |
| Amount, EventUsesTriggerTimeValues, NonConstantParameter | 1 | 01326 |
| Amount, InitialValueReassigned, LocalParameters | 1 | 00708 |
| Amount, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment | 1 | 00946 |
| Amount, LocalParameters, NonConstantParameter | 1 | 01714 |
| Amount, NonConstantCompartment, NonUnityCompartment | 1 | 00945 |
| Amount, NonConstantParameter, ReversibleReaction | 1 | 01340 |
| AssignedVariableStoichiometry, EventIsNotPersistent, InitialValueReassigned, NonConstantParameter, NonUnityStoichiometry, RandomEventExecution, SpeciesReferenceInMath | 1 | 01626 |
| BoolNumericSwap, EventT0Firing, NonConstantParameter | 1 | 01284 |
| BoolNumericSwap, InitialValueReassigned | 1 | 01282 |
| Concentration, EventIsPersistent, NonUnityCompartment | 1 | 00764 |
| Concentration, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment | 1 | 00948 |
| Concentration, NonConstantCompartment, NonUnityCompartment | 1 | 00947 |
| DelayInEventAssignment, EventIsNotPersistent, InitialValueReassigned, NonConstantParameter, RandomEventExecution | 1 | 01592 |
| DelayInEventAssignment, EventUsesAssignmentTimeValues, NonConstantParameter | 1 | 01524 |
| DelayInEventAssignment, EventUsesTriggerTimeValues, NonConstantParameter | 1 | 01523 |
| DelayInTrigger, EventIsNotPersistent, NonConstantParameter | 1 | 01520 |
| DelayInTrigger, EventIsPersistent, NonConstantParameter | 1 | 01518 |
| EventIsNotPersistent, EventIsPersistent, EventUsesAssignmentTimeValues, EventUsesTriggerTimeValues, NonConstantParameter | 1 | 00978 |
| EventIsNotPersistent, EventT0Firing, InitialValueReassigned, NonConstantParameter | 1 | 01755 |
| EventIsNotPersistent, EventT0Firing, InitialValueReassigned, NonConstantParameter, RandomEventExecution | 1 | 01466 |
| EventIsNotPersistent, EventT0Firing, NonConstantParameter | 1 | 01336 |
| EventIsNotPersistent, EventUsesAssignmentTimeValues, InitialValueReassigned, NonConstantParameter, RandomEventExecution | 1 | 01590 |
| EventIsNotPersistent, InitialValueReassigned, NoMathML, NonConstantParameter, RandomEventExecution, UncommonMathML | 1 | 01605 |
| EventIsNotPersistent, InitialValueReassigned, NonConstantCompartment, NonConstantParameter, NonUnityCompartment, RandomEventExecution, VolumeConcentrationRates | 1 | 01627 |
| EventIsNotPersistent, InitialValueReassigned, NonConstantParameter | 1 | 00953 |
| EventIsNotPersistent, InitialValueReassigned, NonConstantParameter, RandomEventExecution, UncommonMathML | 1 | 01599 |
| EventIsPersistent, EventT0Firing, InitialValueReassigned, NonConstantParameter | 1 | 01754 |
| EventT0Firing, EventUsesAssignmentTimeValues, InitialValueReassigned, NonConstantParameter | 1 | 01757 |
| EventT0Firing, EventUsesAssignmentTimeValues, NonConstantParameter | 1 | 01334 |
| EventT0Firing, EventUsesTriggerTimeValues, InitialValueReassigned, NonConstantParameter | 1 | 01756 |
| EventT0Firing, EventUsesTriggerTimeValues, NonConstantParameter | 1 | 01333 |
| EventUsesAssignmentTimeValues, NoMathML, NonConstantParameter | 1 | 01603 |
| EventUsesTriggerTimeValues, NoMathML, NonConstantParameter | 1 | 01601 |
| InitialValueReassigned, NonConstantParameter | 1 | 01261 |

## Skipped cases

| reason | cases |
| --- | --- |
| no L3V2 file | 131 |
| package comp | 123 |
| test type FluxBalanceSteadyState | 34 |

## Cases

| case | components | roadrunner | sbml2cellml | libopencor | cellml2sbml | roundtrip | informative |
| --- | --- | --- | --- | --- | --- | --- | --- |
| 00001 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00002 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00003 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00004 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00005 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00006 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | no |
| 00007 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00008 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00009 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | no |
| 00010 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00011 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00012 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00013 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | no |
| 00014 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00015 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00016 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00017 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00018 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00019 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00020 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00021 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00022 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00023 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00024 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00025 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00026 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00027 | Compartment, Species, Reaction, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00028 | Compartment, Species, Reaction, Parameter | pass | fail | skip | skip | skip | yes |
| 00029 | Compartment, Species, AssignmentRule | pass | pass | pass | pass | pass | no |
| 00030 | Compartment, Species, AssignmentRule | pass | pass | pass | pass | pass | no |
| 00031 | Compartment, Species, RateRule | pass | pass | pass | pass | pass | yes |
| 00032 | Compartment, Species, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00033 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00034 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00035 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00036 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00037 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00038 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00039 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00040 | Compartment, Species, Parameter, AlgebraicRule, RateRule | fail | pass | pass | pass | fail | yes |
| 00041 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00042 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00043 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00044 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00045 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00046 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00047 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00048 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00049 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00050 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00051 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00052 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00053 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00054 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00055 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00056 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00057 | Compartment, Species, Reaction | pass | pass | pass | pass | pass | yes |
| 00058 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00060 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00061 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00062 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00063 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00064 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00065 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00066 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00067 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00071 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00072 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00073 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00074 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00075 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00076 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00077 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00078 | Compartment, Species, Reaction, Parameter, FunctionDefinition, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00079 | Compartment, Species, Reaction, Parameter, FunctionDefinition, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00080 | Compartment, Species, Reaction, Parameter, FunctionDefinition, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00081 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00082 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00083 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00084 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00085 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00086 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00087 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00088 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00089 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00090 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00091 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00092 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00093 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00094 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00095 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00096 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00097 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00098 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00099 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00100 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00101 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00102 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00103 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00104 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00105 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00106 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00107 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00108 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00109 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00110 | Compartment, FunctionDefinition, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00111 | Compartment, FunctionDefinition, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00112 | Compartment, FunctionDefinition, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00113 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00114 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00115 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00116 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00117 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00118 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | no |
| 00119 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00120 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00121 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00122 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00123 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00124 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00125 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00126 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00127 | Compartment, Parameter, Reaction, Species, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00128 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00132 | Compartment, Species, Reaction, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00133 | Compartment, Parameter, Species, Reaction, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00135 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00136 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00137 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00138 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00139 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00140 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00141 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00142 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00143 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00144 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00145 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00146 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00147 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00148 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00149 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00150 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00151 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00152 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00153 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00154 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00155 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00156 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00157 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00158 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00159 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00160 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00161 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00162 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00163 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00164 | Parameter, RateRule | pass | pass | pass | pass | pass | no |
| 00165 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00166 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00167 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00168 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00169 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00170 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00171 | Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00172 | Parameter, RateRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00173 | Parameter, RateRule | pass | fail | skip | skip | skip | yes |
| 00174 | Parameter, AssignmentRule | pass | pass | pass | pass | pass | no |
| 00175 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00176 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00177 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00178 | Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00179 | Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00180 | Parameter, InitialAssignment, RateRule | pass | pass | pass | pass | pass | yes |
| 00181 | Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00182 | Parameter, RateRule, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00183 | Parameter, FunctionDefinition, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00184 | Parameter, FunctionDefinition, RateRule, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00185 | Parameter, InitialAssignment, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00186 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00187 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00188 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00189 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00190 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00191 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00192 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00193 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00194 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00195 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00196 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00197 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00198 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00199 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00200 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00201 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00202 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00203 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00204 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00205 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00206 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00207 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00208 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00209 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00210 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00211 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00212 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00213 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | no |
| 00214 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00215 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00216 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00217 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00218 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00219 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00220 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00221 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00222 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00223 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00224 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00225 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00226 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00227 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00228 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | no |
| 00229 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00230 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00231 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00232 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00233 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00234 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00235 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00236 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00237 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00238 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00239 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00240 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00241 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00242 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00243 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00244 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00245 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00246 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00247 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00248 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00249 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00250 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00251 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00252 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00253 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00254 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00255 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00256 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00257 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00258 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00259 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00260 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00261 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00262 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00263 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00264 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00265 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00266 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00267 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00268 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00269 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | fail | skip | skip | skip | yes |
| 00270 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00271 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00272 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00273 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00274 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00275 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00276 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00277 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00278 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00279 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00280 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00281 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00282 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00283 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00284 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00285 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00286 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00287 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00288 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00289 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00290 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00291 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00292 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00293 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00294 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00295 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00296 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00297 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00298 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00299 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00300 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00301 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00302 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00303 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00304 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00305 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00306 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00307 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00308 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00309 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00310 | Compartment, Species, Reaction, Parameter, AssignmentRule, RateRule | pass | pass | pass | pass | pass | yes |
| 00311 | Compartment, Species, Reaction, Parameter, AssignmentRule, RateRule | pass | pass | pass | pass | pass | yes |
| 00312 | Compartment, Species, Reaction, Parameter, AssignmentRule, RateRule | pass | pass | pass | pass | pass | yes |
| 00313 | Compartment, Species, RateRule, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00314 | Compartment, Species, RateRule, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00315 | Compartment, Species, RateRule, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00316 | Compartment, Species, RateRule, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00317 | Compartment, Species, RateRule, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00318 | Compartment, Species, RateRule, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00319 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00320 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00321 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00322 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00323 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00324 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00325 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00326 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00327 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00328 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00329 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00330 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00331 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00332 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00333 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00334 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00335 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00336 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00337 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00338 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00339 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00340 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00341 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00342 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00343 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00344 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00345 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00346 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00347 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00348 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00349 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00350 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00351 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00352 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00353 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00354 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00355 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00356 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00357 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00358 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00359 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00360 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00361 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00362 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00363 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00364 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00365 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00366 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00367 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00368 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00369 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00370 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00371 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00372 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00373 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00374 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00375 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00376 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00377 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00378 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00379 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00380 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00381 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00382 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00383 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00384 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00385 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00386 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00387 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00389 | Compartment, Species, Reaction, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00390 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00392 | Compartment, Species, Reaction, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00393 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00395 | Compartment, Species, Reaction, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00396 | Parameter, RateRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00397 | Parameter, RateRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00398 | Parameter, RateRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00399 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00400 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00401 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00402 | Parameter, RateRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00403 | Parameter, RateRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00404 | Parameter, RateRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00405 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00406 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00407 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00408 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00409 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00410 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00411 | Compartment, Species, Reaction, Parameter, EventWithDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00412 | Compartment, Species, Reaction, Parameter, EventWithDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00413 | Compartment, Species, Reaction, Parameter, EventWithDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00414 | Compartment, Species, Reaction, Parameter, EventWithDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00415 | Compartment, Species, Reaction, Parameter, EventWithDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00416 | Compartment, Species, Reaction, Parameter, EventWithDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00417 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00418 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00419 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00420 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00421 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00422 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00423 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00424 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00425 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00426 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00427 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00428 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00429 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00430 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00431 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00432 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00433 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00434 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00435 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00436 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00437 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00438 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00439 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00440 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00441 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00442 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00443 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00444 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00446 | Compartment, Species, Reaction, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00447 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00449 | Compartment, Species, Reaction, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00450 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00452 | Compartment, Species, Reaction, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00453 | Parameter, RateRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00454 | Parameter, RateRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00455 | Parameter, RateRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00456 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00457 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00458 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00459 | Parameter, RateRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00460 | Parameter, RateRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00461 | Parameter, RateRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00462 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00463 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00464 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | no |
| 00465 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00466 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00467 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00468 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00469 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00470 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00471 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00472 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00473 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00474 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00475 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00476 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00477 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00478 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00479 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00480 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00481 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00482 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00483 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00484 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00485 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00486 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00487 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00488 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00489 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00490 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00491 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00492 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00493 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00494 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00495 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00496 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00497 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00498 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00499 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00500 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00501 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00502 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00503 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00504 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00505 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00506 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00507 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00508 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00509 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00510 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00511 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00512 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00513 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00514 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00515 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00522 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00523 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00524 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00525 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00526 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00527 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00528 | Compartment, Species, Reaction, Parameter, InitialAssignment, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00529 | Compartment, Species, Reaction, Parameter, InitialAssignment, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00530 | Compartment, Species, Reaction, Parameter, InitialAssignment, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00531 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00532 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00533 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00534 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00535 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00536 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00537 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00538 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00539 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00540 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00541 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00542 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00543 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00544 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00545 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00546 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00547 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00548 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00549 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00550 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00551 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00552 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00553 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00554 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00555 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00556 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00557 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00558 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00559 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00560 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00565 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00566 | Compartment, Species, Reaction, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00567 | Compartment, Species, Reaction, Parameter, AlgebraicRule, FunctionDefinition | fail | pass | pass | pass | fail | yes |
| 00568 | Compartment, Species, Reaction, Parameter, AlgebraicRule, FunctionDefinition | fail | pass | pass | pass | fail | yes |
| 00569 | Compartment, Species, Reaction, Parameter, AlgebraicRule, FunctionDefinition | fail | pass | pass | pass | fail | yes |
| 00570 | Compartment, Species, Reaction, Parameter, AlgebraicRule, FunctionDefinition | fail | pass | pass | pass | fail | yes |
| 00571 | Compartment, Species, Reaction, Parameter, AlgebraicRule, FunctionDefinition | fail | pass | pass | pass | fail | yes |
| 00572 | Compartment, Species, Reaction, Parameter, AlgebraicRule, FunctionDefinition | fail | pass | pass | pass | fail | yes |
| 00573 | Parameter, RateRule, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00574 | Parameter, RateRule, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00575 | Parameter, RateRule, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00576 | Parameter, RateRule, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00577 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00578 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00579 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | no |
| 00580 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00581 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00582 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00583 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00584 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00585 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00586 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00587 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00588 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00589 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00590 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00591 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00592 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00593 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00594 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00595 | Compartment, Species, Reaction | pass | pass | pass | pass | pass | yes |
| 00596 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00598 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00599 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00600 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00601 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00602 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00603 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00604 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00605 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00606 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00607 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00608 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00611 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00612 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00613 | Compartment, Species, Reaction, Parameter, AlgebraicRule, AssignmentRule | fail | pass | pass | pass | fail | yes |
| 00614 | Compartment, Species, Reaction, Parameter, AlgebraicRule, AssignmentRule | fail | pass | pass | pass | fail | yes |
| 00615 | Compartment, Species, Reaction, Parameter, AlgebraicRule, AssignmentRule | fail | pass | pass | pass | fail | yes |
| 00616 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00617 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00618 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00619 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00620 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00621 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00622 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00623 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00624 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00625 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00626 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00627 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00628 | Compartment, Species, Reaction, Parameter, AlgebraicRule, AssignmentRule, FunctionDefinition | fail | pass | pass | pass | fail | yes |
| 00629 | Compartment, Species, Reaction, Parameter, AlgebraicRule, AssignmentRule, FunctionDefinition | fail | pass | pass | pass | fail | yes |
| 00630 | Compartment, Species, Reaction, Parameter, AlgebraicRule, AssignmentRule, FunctionDefinition | fail | pass | pass | pass | fail | yes |
| 00631 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00632 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00633 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00634 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00635 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00636 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00637 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00638 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00639 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay, FunctionDefinition | pass | pass | fail | pass | fail | yes |
| 00640 | Compartment, Species, Reaction, Parameter, RateRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00641 | Compartment, Species, Reaction, Parameter, RateRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00642 | Compartment, Species, Reaction, Parameter, RateRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00643 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00644 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00645 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00646 | Compartment, Species, Reaction, Parameter, RateRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00647 | Compartment, Species, Reaction, Parameter, RateRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00648 | Compartment, Species, Reaction, Parameter, RateRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00649 | Compartment, Species, Reaction, Parameter, RateRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00650 | Compartment, Species, Reaction, Parameter, RateRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00651 | Compartment, Species, Reaction, Parameter, RateRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00652 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00653 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00654 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00655 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00656 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00657 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00658 | Compartment, Species, Reaction, Parameter, AlgebraicRule, InitialAssignment | fail | pass | pass | pass | fail | yes |
| 00659 | Compartment, Species, Reaction, Parameter, AlgebraicRule, InitialAssignment | fail | pass | pass | pass | fail | yes |
| 00660 | Compartment, Species, Reaction, Parameter, AlgebraicRule, InitialAssignment | fail | pass | pass | pass | fail | yes |
| 00661 | Compartment, Species, Reaction, Parameter, AlgebraicRule, EventNoDelay | fail | pass | fail | pass | fail | yes |
| 00662 | Compartment, Species, Reaction, Parameter, AlgebraicRule, EventNoDelay | fail | pass | fail | pass | fail | yes |
| 00663 | Compartment, Species, Reaction, Parameter, AlgebraicRule, EventNoDelay | fail | pass | fail | pass | fail | yes |
| 00664 | Compartment, Species, Reaction, Parameter, AlgebraicRule, EventWithDelay | fail | pass | fail | pass | fail | yes |
| 00665 | Compartment, Species, Reaction, Parameter, AlgebraicRule, EventWithDelay | fail | pass | fail | pass | fail | yes |
| 00666 | Compartment, Species, Reaction, Parameter, AlgebraicRule, EventWithDelay | fail | pass | fail | pass | fail | yes |
| 00667 | Compartment, Species, Reaction, Parameter, FunctionDefinition, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00668 | Compartment, Species, Reaction, Parameter, FunctionDefinition, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00669 | Compartment, Species, Reaction, Parameter, FunctionDefinition, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00670 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00671 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00672 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00673 | Compartment, Species, Reaction, Parameter, AlgebraicRule, AssignmentRule | fail | pass | pass | pass | fail | yes |
| 00674 | Compartment, Species, Reaction, Parameter, AlgebraicRule, AssignmentRule | fail | pass | pass | pass | fail | yes |
| 00675 | Compartment, Species, Reaction, Parameter, AlgebraicRule, AssignmentRule | fail | pass | pass | pass | fail | yes |
| 00676 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00677 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00678 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00679 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00680 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00681 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00682 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00683 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00684 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00685 | Compartment, Species, Reaction, Parameter, FunctionDefinition, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00686 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00687 | Compartment, Species, Reaction, Parameter, AlgebraicRule, AssignmentRule | fail | pass | pass | pass | fail | yes |
| 00688 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00689 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00690 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00691 | Compartment, Species, Reaction, Parameter, FunctionDefinition, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00692 | Compartment, Species, Reaction, Parameter, FunctionDefinition, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00693 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00694 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00695 | Compartment, Species, Reaction, Parameter, AlgebraicRule, AssignmentRule | fail | pass | pass | pass | fail | yes |
| 00696 | Compartment, Species, Reaction, Parameter, AlgebraicRule, AssignmentRule | fail | pass | pass | pass | fail | yes |
| 00697 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00698 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00699 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay | pass | pass | pass | pass | pass | yes |
| 00700 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00701 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay | pass | pass | pass | pass | pass | yes |
| 00702 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00703 | Compartment, Species, Reaction, Parameter, FunctionDefinition, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00704 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00705 | Compartment, Species, Reaction, Parameter, AlgebraicRule, AssignmentRule | fail | pass | pass | pass | fail | yes |
| 00706 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00707 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00708 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00709 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00710 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00711 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00712 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00713 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00714 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00715 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00716 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00717 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00718 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00719 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00720 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00721 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00722 | Compartment, Species, Reaction, Parameter, RateRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00723 | Compartment, Species, Reaction, Parameter, RateRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00724 | Compartment, Species, Reaction, Parameter, RateRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00732 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00733 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00734 | Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00735 | Compartment, Species, Reaction, Parameter, RateRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00736 | Compartment, Species, Reaction, Parameter, RateRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00737 | Compartment, Species, Reaction, Parameter, RateRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00738 | Compartment, Species, Reaction, Parameter, FunctionDefinition, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00739 | Compartment, Species, Reaction, Parameter, FunctionDefinition, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00740 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00741 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00742 | Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 00743 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00744 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00745 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00746 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00747 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00748 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00749 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00750 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00751 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition, RateRule | pass | pass | fail | pass | fail | yes |
| 00752 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition, RateRule | pass | pass | fail | pass | fail | yes |
| 00753 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition, RateRule | pass | pass | fail | pass | fail | yes |
| 00754 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition, InitialAssignment | pass | pass | fail | pass | fail | yes |
| 00755 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition, InitialAssignment | pass | pass | fail | pass | fail | yes |
| 00756 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition, InitialAssignment | pass | pass | fail | pass | fail | yes |
| 00757 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00758 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00759 | Compartment, Species, Reaction, Parameter, EventNoDelay, FunctionDefinition, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00760 | Compartment, Species, Reaction, Parameter, AlgebraicRule, EventNoDelay, FunctionDefinition | fail | pass | fail | pass | fail | yes |
| 00761 | Compartment, Species, Reaction, Parameter, AlgebraicRule, EventNoDelay, FunctionDefinition | fail | pass | fail | pass | fail | yes |
| 00762 | Compartment, Species, Reaction, Parameter, AlgebraicRule, EventNoDelay, FunctionDefinition | fail | pass | fail | pass | fail | yes |
| 00763 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00764 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00765 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00766 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00767 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00768 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00769 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00770 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00771 | Compartment, Species, Reaction, Parameter, EventWithDelay, InitialAssignment | pass | pass | fail | pass | fail | yes |
| 00772 | Compartment, Species, Reaction, Parameter, EventWithDelay, InitialAssignment | pass | pass | fail | pass | fail | yes |
| 00773 | Compartment, Species, Reaction, Parameter, EventWithDelay, InitialAssignment | pass | pass | fail | pass | fail | yes |
| 00774 | Compartment, Species, Reaction, Parameter, EventWithDelay, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00775 | Compartment, Species, Reaction, Parameter, EventWithDelay, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00776 | Compartment, Species, Reaction, Parameter, EventWithDelay, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00777 | Compartment, Species, Reaction, Parameter, AssignmentRule, EventWithDelay, AlgebraicRule | fail | pass | fail | pass | fail | yes |
| 00778 | Compartment, Species, Reaction, Parameter, AlgebraicRule, EventWithDelay, InitialAssignment | fail | pass | fail | pass | fail | yes |
| 00779 | Compartment, Species, Reaction, Parameter, AlgebraicRule, EventWithDelay, InitialAssignment | fail | pass | fail | pass | fail | yes |
| 00780 | Compartment, Species, Reaction, Parameter, AlgebraicRule, EventWithDelay, InitialAssignment | fail | pass | fail | pass | fail | yes |
| 00781 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00782 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00783 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00784 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00785 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00786 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00787 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00788 | Compartment, Species, Reaction, Parameter, AssignmentRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00789 | Compartment, Species, Reaction, Parameter, EventNoDelay, InitialAssignment | pass | pass | fail | pass | fail | yes |
| 00790 | Compartment, Species, Reaction, Parameter, EventNoDelay, InitialAssignment | pass | pass | fail | pass | fail | yes |
| 00791 | Compartment, Species, Reaction, Parameter, EventNoDelay, InitialAssignment | pass | pass | fail | pass | fail | yes |
| 00792 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00793 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00794 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00795 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00796 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00797 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00798 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00799 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00800 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00801 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00802 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00803 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00804 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00805 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00806 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00807 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00808 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00809 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00810 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00811 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00812 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00813 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00814 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00815 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00816 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00817 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00818 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00819 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00820 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00821 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00822 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00823 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00824 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00825 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00826 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00830 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 00831 | Compartment, Species, Reaction | pass | pass | pass | pass | pass | yes |
| 00832 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00833 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00834 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00835 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00836 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00837 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00838 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00839 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00840 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00841 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00842 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00843 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00844 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00845 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00846 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00847 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00848 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00849 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00850 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00851 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00852 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00853 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00854 | Compartment, Species, Reaction, Parameter, FunctionDefinition, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00855 | Compartment, Species, Reaction, Parameter, FunctionDefinition, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00856 | Compartment, Species, Reaction, Parameter, FunctionDefinition, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00857 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00858 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00859 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00860 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00861 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00862 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00863 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00864 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00865 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00866 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00867 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00868 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00869 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00876 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 00877 | Compartment, Species, Reaction, Parameter, CSymbolTime, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00878 | Compartment, Species, CSymbolTime, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00879 | Compartment, Species, CSymbolTime, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00880 | Compartment, Species, CSymbolTime, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00881 | Compartment, Species, CSymbolTime, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 00882 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00883 | Compartment, Species, Reaction, Parameter, CSymbolTime, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00884 | Compartment, Species, Reaction, CSymbolTime, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00885 | Compartment, Species, Reaction, CSymbolTime, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00886 | Compartment, Species, CSymbolTime, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00887 | Compartment, Species, Reaction, Parameter, CSymbolTime, EventWithDelay, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00888 | Compartment, Species, CSymbolTime, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00889 | Compartment, Species, Reaction, Parameter, CSymbolTime, RateRule | pass | pass | pass | pass | pass | yes |
| 00890 | Compartment, Species, Reaction, CSymbolTime, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00891 | Parameter, RateRule, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00892 | Parameter, RateRule, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00893 | Parameter, RateRule, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00894 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00895 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00896 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00897 | Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 00901 | Compartment, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00902 | Compartment, RateRule | pass | pass | pass | pass | pass | yes |
| 00903 | Compartment, RateRule | pass | pass | pass | pass | pass | yes |
| 00904 | Compartment, RateRule | pass | pass | pass | pass | pass | yes |
| 00905 | Compartment, RateRule | pass | pass | pass | pass | pass | yes |
| 00906 | Compartment, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00907 | Compartment, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 00908 | Compartment, RateRule | pass | pass | pass | pass | pass | yes |
| 00909 | Compartment, RateRule | pass | pass | pass | pass | pass | yes |
| 00910 | Compartment, RateRule | pass | pass | pass | pass | pass | yes |
| 00911 | Compartment, RateRule, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00912 | Compartment, RateRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00913 | Compartment, RateRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00914 | Compartment, RateRule, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00915 | Compartment, RateRule, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 00916 | Compartment, RateRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00917 | Compartment, RateRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00918 | Compartment, RateRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00919 | Compartment, RateRule, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 00920 | Parameter, InitialAssignment | pass | pass | pass | pass | pass | no |
| 00921 | Parameter, InitialAssignment | pass | pass | pass | pass | pass | no |
| 00922 | Parameter, InitialAssignment | pass | pass | pass | pass | pass | no |
| 00923 | Parameter, AssignmentRule | pass | pass | pass | pass | pass | no |
| 00924 | Parameter, AssignmentRule | pass | pass | pass | pass | pass | no |
| 00925 | Parameter, AssignmentRule | pass | pass | pass | pass | pass | no |
| 00926 | Compartment, Species, RateRule | pass | pass | pass | pass | pass | yes |
| 00927 | Compartment, Species, RateRule | pass | pass | pass | pass | pass | yes |
| 00928 | Compartment, CSymbolTime, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 00929 | Compartment, CSymbolTime, Species, Reaction, Parameter, EventNoDelay | pass | pass | pass | pass | pass | yes |
| 00930 | Compartment, CSymbolTime, Species, EventNoDelay, EventPriority | pass | pass | fail | pass | fail | yes |
| 00931 | Compartment, CSymbolTime, Species, EventNoDelay, EventPriority | pass | pass | fail | pass | fail | yes |
| 00932 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | pass | pass | pass | yes |
| 00933 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 00934 | CSymbolTime, Compartment, EventNoDelay, EventPriority, Species | pass | pass | fail | pass | fail | yes |
| 00935 | CSymbolTime, Compartment, EventNoDelay, EventPriority, Species | pass | pass | fail | pass | fail | yes |
| 00936 | AssignmentRule, CSymbolTime, Compartment, EventWithDelay, Species | pass | fail | skip | skip | skip | yes |
| 00937 | AssignmentRule, CSymbolDelay, CSymbolTime, Parameter | fail | fail | skip | skip | skip | yes |
| 00938 | AssignmentRule, CSymbolDelay, CSymbolTime, Compartment, InitialAssignment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 00939 | AssignmentRule, CSymbolDelay, Compartment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 00940 | AssignmentRule, CSymbolDelay, CSymbolTime, Compartment, InitialAssignment, Parameter, Species | fail | fail | skip | skip | skip | yes |
| 00941 | AssignmentRule, CSymbolDelay, CSymbolTime, InitialAssignment, Parameter | fail | fail | skip | skip | skip | yes |
| 00942 | AssignmentRule, CSymbolDelay, CSymbolTime, Compartment, InitialAssignment, Parameter, Species | fail | fail | skip | skip | skip | yes |
| 00943 | AssignmentRule, CSymbolDelay, CSymbolTime, InitialAssignment, Parameter | fail | fail | skip | skip | skip | yes |
| 00944 | Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 00945 | Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 00946 | AssignmentRule, Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 00947 | Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 00948 | AssignmentRule, Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 00949 | Parameter | pass | pass | pass | pass | pass | no |
| 00950 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 00951 | Parameter | pass | pass | pass | pass | pass | no |
| 00952 | AssignmentRule, CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 00953 | AssignmentRule, CSymbolTime, EventNoDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 00954 | AssignmentRule, Parameter | pass | pass | pass | pass | pass | no |
| 00955 | AssignmentRule, CSymbolTime, Parameter | pass | fail | skip | skip | skip | yes |
| 00956 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 00957 | AssignmentRule, Parameter | pass | fail | skip | skip | skip | no |
| 00958 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 00959 | AssignmentRule, CSymbolTime, Parameter | pass | fail | skip | skip | skip | yes |
| 00960 | CSymbolAvogadro, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 00961 | AssignmentRule, CSymbolAvogadro, Parameter | pass | pass | pass | pass | pass | no |
| 00962 | AssignmentRule, CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 00963 | CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 00964 | AssignmentRule, CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 00965 | AssignmentRule, CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 00966 | AssignmentRule, CSymbolTime, EventNoDelay, EventPriority, FunctionDefinition, Parameter | pass | pass | fail | pass | fail | yes |
| 00967 | CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 00969 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00970 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00971 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00972 | Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 00974 | AssignmentRule, Compartment, InitialAssignment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00975 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00976 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00977 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00978 | CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 00979 | CSymbolTime, EventNoDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 00980 | CSymbolTime, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 00981 | AssignmentRule, CSymbolDelay, CSymbolTime, Compartment, Parameter, RateRule | fail | fail | skip | skip | skip | yes |
| 00982 | AssignmentRule, CSymbolDelay, CSymbolTime, Parameter, RateRule | fail | fail | skip | skip | skip | yes |
| 00983 | AlgebraicRule, AssignmentRule, CSymbolDelay, CSymbolTime, Parameter, RateRule | fail | fail | skip | skip | skip | yes |
| 00984 | AssignmentRule, CSymbolDelay, CSymbolTime, Compartment, EventNoDelay, Parameter, RateRule | fail | fail | skip | skip | skip | yes |
| 00985 | AssignmentRule, CSymbolDelay, Parameter, RateRule | fail | fail | skip | skip | skip | yes |
| 00995 | EventNoDelay, Parameter | pass | pass | fail | pass | fail | no |
| 00996 | EventNoDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 00997 | EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | no |
| 00998 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 00999 | AssignmentRule, Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01000 | AssignmentRule, CSymbolAvogadro, CSymbolTime, Compartment, EventNoDelay, EventPriority, EventWithDelay, FunctionDefinition, InitialAssignment, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01001 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01002 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01003 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01004 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 01005 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 01006 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 01007 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01008 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01009 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01010 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01011 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01012 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01013 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01014 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 01015 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 01016 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01017 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01018 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01019 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01020 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01021 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01022 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01023 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01024 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01025 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01026 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01030 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01031 | Compartment, Species, Reaction | pass | pass | pass | pass | pass | yes |
| 01032 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 01033 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 01034 | Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 01035 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 01036 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 01037 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 01038 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 01039 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 01040 | Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 01041 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01042 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01043 | Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01044 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 01045 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 01046 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 01047 | Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 01048 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 01049 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 01050 | Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 01054 | Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 01055 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01056 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01057 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01058 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01059 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01060 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01061 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01062 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01063 | Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01064 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01065 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01066 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01067 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01068 | InitialAssignment, Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 01069 | InitialAssignment, Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 01070 | InitialAssignment, Compartment, Species, Reaction, Parameter, FunctionDefinition | pass | pass | pass | pass | pass | yes |
| 01071 | InitialAssignment, Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 01072 | InitialAssignment, Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 01073 | InitialAssignment, Compartment, Species, Reaction, Parameter, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 01074 | InitialAssignment, Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 01075 | InitialAssignment, Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 01076 | InitialAssignment, Compartment, Species, Reaction, Parameter, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 01077 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01078 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01079 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01080 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01081 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01082 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01083 | InitialAssignment, Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 01084 | InitialAssignment, Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 01085 | InitialAssignment, Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 01086 | InitialAssignment, Compartment, Species, Reaction, Parameter, AlgebraicRule | fail | pass | pass | pass | fail | yes |
| 01087 | InitialAssignment, Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 01088 | InitialAssignment, Compartment, Species, Reaction, Parameter, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 01089 | InitialAssignment, Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01090 | InitialAssignment, Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01091 | InitialAssignment, Compartment, Species, Reaction, Parameter, FunctionDefinition, RateRule | pass | pass | pass | pass | pass | yes |
| 01092 | InitialAssignment, Compartment, Species, Reaction, Parameter, RateRule, AssignmentRule | pass | pass | pass | pass | pass | yes |
| 01093 | InitialAssignment, Compartment, Species, Reaction, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01094 | InitialAssignment, Compartment, Species, Reaction, Parameter, RateRule, EventNoDelay | pass | pass | fail | pass | fail | yes |
| 01095 | InitialAssignment, Compartment, Species, Reaction, Parameter, RateRule, EventWithDelay | pass | pass | fail | pass | fail | yes |
| 01096 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01097 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01098 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01099 | InitialAssignment, Compartment, Species, Reaction, Parameter, CSymbolTime | pass | pass | pass | pass | pass | yes |
| 01100 | Compartment, Species, Reaction, Parameter, CSymbolTime, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 01101 | Compartment, Species, Reaction, Parameter, CSymbolTime, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 01102 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01103 | Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01104 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01105 | AssignmentRule, Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01106 | AssignmentRule, Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01107 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01108 | AlgebraicRule, AssignmentRule, Compartment, Parameter, Reaction, Species | fail | pass | pass | pass | fail | yes |
| 01109 | AssignmentRule, CSymbolTime, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01110 | Compartment, Species, Reaction, Parameter, InitialAssignment | pass | pass | pass | pass | pass | yes |
| 01111 | InitialAssignment, Compartment, Species, Reaction, Parameter | pass | pass | pass | pass | pass | yes |
| 01112 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01113 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01114 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01115 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01116 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01117 | Compartment, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01118 | Compartment, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01119 | CSymbolTime, EventPriority, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01120 | Compartment, EventWithDelay, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01121 | AssignmentRule, CSymbolAvogadro, CSymbolTime, Compartment, FunctionDefinition, InitialAssignment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01122 | Compartment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01123 | Compartment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01184 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01185 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01197 | Compartment | pass | pass | pass | pass | pass | no |
| 01198 | AssignmentRule, Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01199 | AssignmentRule, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01200 | AssignmentRule, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01201 | AssignmentRule, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01202 | AssignmentRule, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01203 | AssignmentRule, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01204 | AssignmentRule, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01205 | AssignmentRule, Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01206 | AssignmentRule, Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01207 | AssignmentRule, Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01208 | AssignmentRule, Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01209 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01210 | AssignmentRule, Parameter | pass | fail | skip | skip | skip | no |
| 01211 | CSymbolTime, EventNoDelay, Parameter | pass | pass | pass | pass | pass | no |
| 01212 | CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 01213 | CSymbolTime, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01214 | CSymbolTime, EventNoDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01215 | Parameter, RateRule | pass | fail | skip | skip | skip | no |
| 01216 | AssignmentRule, Parameter | pass | fail | skip | skip | skip | no |
| 01217 | AssignmentRule, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01218 | AssignmentRule, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01219 | Compartment, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01220 | Compartment, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01221 | Compartment, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01222 | CSymbolTime, Compartment, EventNoDelay, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01223 | AssignmentRule, CSymbolTime, Compartment, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01224 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01225 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01226 | Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01227 | CSymbolTime, Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01228 | CSymbolTime, Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01229 | CSymbolTime, Compartment, EventNoDelay, EventPriority, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01230 | CSymbolTime, Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01231 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01232 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01233 | Compartment, FunctionDefinition, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01234 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01235 | AssignmentRule, Parameter | pass | pass | pass | pass | pass | no |
| 01236 | Parameter, RateRule | pass | pass | pass | pass | pass | no |
| 01237 | CSymbolTime, EventNoDelay, Parameter | pass | pass | pass | pass | pass | no |
| 01238 | EventNoDelay, Parameter | pass | pass | pass | pass | pass | no |
| 01239 | EventNoDelay, Parameter | pass | pass | pass | pass | pass | no |
| 01240 | CSymbolTime, EventNoDelay, Parameter | pass | pass | pass | pass | pass | no |
| 01241 | CSymbolTime, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01242 | CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 01243 | CSymbolTime, EventNoDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01244 | AlgebraicRule, Parameter | pass | pass | pass | pass | pass | no |
| 01245 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | no |
| 01246 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01247 | Parameter | pass | pass | pass | pass | pass | no |
| 01248 | CSymbolRateOf, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01249 | CSymbolRateOf, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01250 | CSymbolRateOf, InitialAssignment, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01251 | CSymbolRateOf, Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01252 | CSymbolRateOf, Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01253 | CSymbolRateOf, Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | no |
| 01254 | CSymbolRateOf, Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01255 | AssignmentRule, CSymbolRateOf, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01256 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01257 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01258 | CSymbolRateOf, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01259 | CSymbolRateOf, Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01260 | CSymbolRateOf, CSymbolTime, EventNoDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01261 | AssignmentRule, CSymbolRateOf, EventNoDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01262 | CSymbolRateOf, CSymbolTime, EventNoDelay, EventPriority, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01263 | CSymbolRateOf, CSymbolTime, EventWithDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01264 | CSymbolRateOf, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01265 | CSymbolRateOf, Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01266 | CSymbolRateOf, CSymbolTime, EventNoDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01267 | CSymbolRateOf, CSymbolTime, EventNoDelay, EventPriority, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01268 | CSymbolRateOf, CSymbolTime, EventWithDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01269 | CSymbolRateOf, CSymbolTime, Compartment, EventPriority, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01270 | CSymbolRateOf, CSymbolTime, Compartment, EventPriority, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01271 | FunctionDefinition, Parameter | pass | pass | pass | pass | pass | no |
| 01272 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01273 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01274 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01275 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01276 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01277 | AssignmentRule, CSymbolTime, Parameter | pass | fail | skip | skip | skip | yes |
| 01278 | AssignmentRule, CSymbolTime, Parameter | pass | fail | skip | skip | skip | yes |
| 01279 | AssignmentRule, CSymbolTime, Parameter | pass | fail | skip | skip | skip | yes |
| 01280 | AssignmentRule, CSymbolTime, Parameter | pass | fail | skip | skip | skip | yes |
| 01281 | AssignmentRule, CSymbolTime, Parameter | pass | fail | skip | skip | skip | yes |
| 01282 | InitialAssignment, Parameter | pass | pass | fail | pass | fail | no |
| 01283 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01284 | EventNoDelay, Parameter | pass | pass | fail | pass | fail | no |
| 01285 | CSymbolTime, EventNoDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01286 | CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 01287 | CSymbolTime, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01288 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01289 | FunctionDefinition, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01290 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01291 | AssignmentRule, Parameter | pass | pass | pass | pass | pass | no |
| 01292 | AlgebraicRule, Parameter | fail | pass | pass | pass | fail | no |
| 01293 | CSymbolRateOf, Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01294 | CSymbolRateOf, CSymbolTime, Compartment, EventNoDelay, EventPriority, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01295 | CSymbolRateOf, CSymbolTime, Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01296 | CSymbolRateOf, Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01297 | CSymbolRateOf, CSymbolTime, Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01298 | CSymbolRateOf, CSymbolTime, Compartment, EventNoDelay, EventPriority, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01299 | CSymbolRateOf, CSymbolTime, Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01300 | InitialAssignment, Parameter, Reaction | pass | pass | pass | pass | pass | no |
| 01301 | AssignmentRule, Parameter, Reaction | pass | pass | pass | pass | pass | no |
| 01302 | Parameter, RateRule, Reaction | pass | pass | pass | pass | pass | yes |
| 01303 | CSymbolTime, EventNoDelay, Parameter, Reaction | pass | pass | fail | pass | fail | yes |
| 01304 | CSymbolTime, EventNoDelay, Parameter, Reaction | pass | pass | fail | pass | fail | yes |
| 01305 | CSymbolTime, EventWithDelay, Parameter, Reaction | pass | pass | fail | pass | fail | yes |
| 01306 | AssignmentRule, CSymbolTime, Parameter, Reaction | pass | fail | skip | skip | skip | yes |
| 01307 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01308 | Compartment, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01309 | Compartment, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01310 | Compartment | pass | pass | pass | pass | pass | no |
| 01311 | FunctionDefinition, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01312 | FunctionDefinition, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01313 | FunctionDefinition, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01314 | FunctionDefinition, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01315 | FunctionDefinition, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01316 | CSymbolAvogadro, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01317 | AssignmentRule, CSymbolTime, Parameter | pass | fail | skip | skip | skip | yes |
| 01318 | AssignmentRule, CSymbolDelay, CSymbolTime, Parameter | fail | fail | skip | skip | skip | yes |
| 01319 | AssignmentRule, CSymbolDelay, CSymbolTime, Parameter | fail | fail | skip | skip | skip | yes |
| 01320 | AssignmentRule, CSymbolDelay, Compartment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01321 | AssignmentRule, CSymbolRateOf, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01322 | AssignmentRule, CSymbolRateOf, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01323 | CSymbolAvogadro, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01324 | EventWithDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01325 | EventWithDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01326 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01327 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01328 | CSymbolTime, EventNoDelay, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01329 | CSymbolTime, EventNoDelay, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01330 | CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 01331 | CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 01332 | EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | no |
| 01333 | EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | no |
| 01334 | EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | no |
| 01335 | EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01336 | EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | no |
| 01337 | EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | no |
| 01338 | Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01339 | Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01340 | CSymbolTime, Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01341 | Compartment, Species | pass | pass | pass | pass | pass | no |
| 01342 | Compartment, Species | pass | pass | pass | pass | pass | no |
| 01343 | AssignmentRule, CSymbolTime, InitialAssignment, Parameter | pass | fail | skip | skip | skip | yes |
| 01395 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01400 | AssignmentRule, CSymbolDelay, CSymbolRateOf, Compartment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01401 | AssignmentRule, CSymbolDelay, CSymbolRateOf, Parameter, RateRule | fail | fail | skip | skip | skip | yes |
| 01402 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01403 | AssignmentRule, CSymbolDelay, CSymbolRateOf, Compartment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01404 | AssignmentRule, CSymbolDelay, Compartment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01405 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01406 | AssignmentRule, CSymbolDelay, CSymbolRateOf, Compartment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01407 | AssignmentRule, CSymbolDelay, Compartment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01408 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01409 | AssignmentRule, CSymbolDelay, CSymbolRateOf, Compartment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01410 | AssignmentRule, CSymbolDelay, Compartment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01411 | AssignmentRule, CSymbolDelay, Compartment, FunctionDefinition, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01412 | AssignmentRule, CSymbolDelay, FunctionDefinition, Parameter, RateRule | fail | fail | skip | skip | skip | yes |
| 01413 | AssignmentRule, CSymbolDelay, FunctionDefinition, Parameter, RateRule | fail | fail | skip | skip | skip | yes |
| 01414 | CSymbolDelay, Compartment, Parameter, RateRule, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01415 | CSymbolDelay, Compartment, Parameter, RateRule, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01416 | AssignmentRule, CSymbolDelay, Parameter, RateRule | fail | fail | skip | skip | skip | no |
| 01417 | AssignmentRule, CSymbolDelay, Compartment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01418 | AssignmentRule, CSymbolDelay, Compartment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01419 | AssignmentRule, CSymbolDelay, Compartment, Parameter, RateRule, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01420 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01421 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01422 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | no |
| 01423 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | no |
| 01424 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01425 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01426 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01427 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01428 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01429 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01430 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01431 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | no |
| 01432 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01433 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01434 | Compartment, InitialAssignment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01436 | Compartment, InitialAssignment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01438 | Compartment, InitialAssignment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01440 | Compartment, InitialAssignment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01442 | Compartment, InitialAssignment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01444 | CSymbolTime, Compartment, EventNoDelay, InitialAssignment, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01445 | CSymbolTime, Compartment, EventNoDelay, InitialAssignment, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01446 | CSymbolTime, Compartment, EventNoDelay, InitialAssignment, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01447 | CSymbolTime, Compartment, EventNoDelay, InitialAssignment, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01448 | CSymbolTime, Compartment, EventNoDelay, InitialAssignment, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01449 | Compartment, InitialAssignment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01450 | Compartment, InitialAssignment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01451 | Compartment, InitialAssignment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01452 | Compartment, InitialAssignment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01453 | Compartment, InitialAssignment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01454 | AssignmentRule, CSymbolDelay, Compartment, Parameter, RateRule, Species | fail | fail | skip | skip | skip | yes |
| 01455 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01456 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01457 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01458 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01459 | CSymbolRateOf, Compartment, Reaction, Species | pass | pass | pass | pass | pass | no |
| 01460 | CSymbolRateOf, Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01461 | AssignmentRule, CSymbolRateOf, Parameter, RateRule | pass | pass | pass | pass | pass | no |
| 01462 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01463 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01464 | Compartment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01465 | AssignmentRule, Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01466 | AssignmentRule, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | no |
| 01478 | AssignmentRule, Compartment, FunctionDefinition, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01479 | AlgebraicRule, CSymbolAvogadro, Parameter | fail | pass | pass | pass | fail | no |
| 01480 | AssignmentRule, CSymbolDelay, Compartment, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01482 | AlgebraicRule, CSymbolRateOf, Parameter, RateRule | fail | pass | pass | pass | fail | yes |
| 01483 | AlgebraicRule, CSymbolRateOf, Compartment, Parameter, Reaction, Species | fail | pass | pass | pass | fail | yes |
| 01484 | AlgebraicRule, Compartment, Parameter, Reaction, Species | fail | pass | pass | pass | fail | yes |
| 01485 | AssignmentRule, FunctionDefinition, Parameter | pass | pass | pass | pass | pass | no |
| 01486 | AssignmentRule, FunctionDefinition, Parameter | pass | fail | skip | skip | skip | no |
| 01487 | AssignmentRule, CSymbolTime, FunctionDefinition, Parameter | pass | fail | skip | skip | skip | yes |
| 01488 | AssignmentRule, CSymbolTime, FunctionDefinition, Parameter | pass | fail | skip | skip | skip | yes |
| 01489 | FunctionDefinition, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01490 | AssignmentRule, FunctionDefinition, Parameter | pass | pass | pass | pass | pass | no |
| 01491 | AssignmentRule, FunctionDefinition, Parameter | pass | pass | pass | pass | pass | no |
| 01492 | AssignmentRule, FunctionDefinition, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01493 | AssignmentRule, FunctionDefinition, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01494 | FunctionDefinition, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01495 | AssignmentRule, CSymbolTime, FunctionDefinition, Parameter | pass | fail | skip | skip | skip | yes |
| 01496 | AssignmentRule, CSymbolTime, FunctionDefinition, Parameter | pass | fail | skip | skip | skip | yes |
| 01497 | AssignmentRule, CSymbolTime, FunctionDefinition, Parameter | pass | fail | skip | skip | skip | yes |
| 01498 | AssignmentRule, Compartment, InitialAssignment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01499 | AlgebraicRule, Compartment, Parameter, Reaction, Species | fail | pass | pass | pass | fail | yes |
| 01500 | AlgebraicRule, Compartment, Parameter, Reaction, Species | fail | pass | pass | pass | fail | yes |
| 01501 | AlgebraicRule, Compartment, Parameter, Reaction, Species | fail | pass | pass | pass | fail | yes |
| 01502 | AlgebraicRule, Parameter | fail | pass | pass | pass | fail | no |
| 01503 | AlgebraicRule, Parameter | fail | pass | pass | pass | fail | no |
| 01504 | AssignmentRule, CSymbolTime, Compartment, EventNoDelay, Parameter, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01505 | AssignmentRule, CSymbolTime, Compartment, EventNoDelay, Parameter, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01506 | AssignmentRule, CSymbolTime, Compartment, EventNoDelay, Parameter, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01507 | AssignmentRule, CSymbolTime, Compartment, EventWithDelay, Parameter, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01508 | AssignmentRule, CSymbolTime, Compartment, EventWithDelay, Parameter, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01509 | AssignmentRule, CSymbolTime, Compartment, EventWithDelay, Parameter, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01510 | AssignmentRule, Compartment, EventNoDelay, Parameter, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01511 | AssignmentRule, Compartment, EventWithDelay, Parameter, RateRule, Species | fail | pass | fail | pass | fail | yes |
| 01512 | AssignmentRule, CSymbolTime, Compartment, EventNoDelay, EventPriority, Parameter, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01513 | AssignmentRule, Compartment, InitialAssignment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01514 | AssignmentRule, Compartment, InitialAssignment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01515 | Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01516 | Compartment, InitialAssignment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01518 | CSymbolDelay, EventWithDelay, Parameter, RateRule | fail | pass | fail | pass | fail | yes |
| 01519 | CSymbolDelay, EventWithDelay, Parameter, RateRule | fail | pass | pass | pass | pass | yes |
| 01520 | CSymbolDelay, EventWithDelay, Parameter, RateRule | fail | pass | fail | pass | fail | yes |
| 01521 | CSymbolDelay, EventNoDelay, EventPriority, Parameter, RateRule | fail | pass | fail | pass | fail | yes |
| 01522 | AssignmentRule, CSymbolDelay, CSymbolTime, EventNoDelay, Parameter | fail | fail | skip | skip | skip | yes |
| 01523 | CSymbolDelay, EventWithDelay, Parameter, RateRule | fail | pass | fail | pass | fail | yes |
| 01524 | CSymbolDelay, EventWithDelay, Parameter, RateRule | fail | pass | fail | pass | fail | yes |
| 01525 | CSymbolRateOf, CSymbolTime, EventWithDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01526 | CSymbolRateOf, CSymbolTime, EventWithDelay, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01527 | CSymbolRateOf, EventNoDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01528 | CSymbolRateOf, CSymbolTime, EventWithDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01529 | CSymbolRateOf, CSymbolTime, EventWithDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01530 | CSymbolTime, EventNoDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01531 | EventNoDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01532 | EventWithDelay, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01533 | CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 01534 | AssignmentRule, CSymbolDelay, Compartment, InitialAssignment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01535 | AssignmentRule, CSymbolDelay, Compartment, InitialAssignment, Parameter, RateRule, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01536 | CSymbolDelay, CSymbolTime, Compartment, EventNoDelay, Parameter, RateRule, Reaction, Species | fail | pass | fail | pass | fail | yes |
| 01537 | AssignmentRule, CSymbolDelay, Compartment, Parameter, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01538 | AssignmentRule, CSymbolDelay, Compartment, Parameter, RateRule, Reaction, Species | fail | fail | skip | skip | skip | yes |
| 01540 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01541 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01542 | AssignmentRule, CSymbolRateOf, Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01543 | AssignmentRule, CSymbolRateOf, Compartment, InitialAssignment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01552 | AssignmentRule, Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01553 | Compartment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01554 | Compartment, InitialAssignment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01555 | AssignmentRule, Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01556 | Compartment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01557 | Compartment, InitialAssignment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01561 | Compartment, InitialAssignment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01563 | Compartment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01564 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01566 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01574 | AssignmentRule, Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01575 | AlgebraicRule, EventWithDelay, Parameter, RateRule | fail | pass | fail | pass | fail | yes |
| 01576 | AlgebraicRule, EventWithDelay, Parameter, RateRule | fail | pass | pass | pass | fail | yes |
| 01577 | AlgebraicRule, CSymbolTime, EventNoDelay, EventPriority, Parameter, RateRule | fail | pass | fail | pass | fail | yes |
| 01578 | AlgebraicRule, EventNoDelay, Parameter | fail | pass | fail | pass | fail | no |
| 01579 | AlgebraicRule, EventWithDelay, Parameter, RateRule | fail | pass | fail | pass | fail | yes |
| 01580 | AssignmentRule, Compartment, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01582 | AssignmentRule, Compartment, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01583 | Compartment, EventNoDelay, EventPriority, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01584 | AssignmentRule, Compartment, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01586 | AssignmentRule, Compartment, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01588 | AssignmentRule, CSymbolTime, EventNoDelay, EventPriority, InitialAssignment, Parameter | pass | pass | fail | pass | fail | yes |
| 01589 | AlgebraicRule, CSymbolTime, EventNoDelay, EventPriority, Parameter | fail | pass | fail | pass | fail | yes |
| 01590 | AssignmentRule, CSymbolTime, EventNoDelay, EventPriority, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01591 | AssignmentRule, CSymbolTime, EventNoDelay, EventPriority, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01592 | AssignmentRule, CSymbolDelay, CSymbolTime, EventNoDelay, EventPriority, Parameter, RateRule | fail | pass | fail | pass | fail | yes |
| 01593 | AssignmentRule, CSymbolDelay, CSymbolTime, EventNoDelay, EventPriority, Parameter, RateRule | fail | fail | skip | skip | skip | yes |
| 01594 | AssignmentRule, CSymbolTime, EventWithDelay, Parameter | pass | fail | skip | skip | skip | yes |
| 01595 | AssignmentRule, CSymbolTime, EventWithDelay, Parameter | pass | fail | skip | skip | skip | yes |
| 01596 | AssignmentRule, CSymbolTime, EventNoDelay, Parameter | pass | fail | skip | skip | skip | yes |
| 01597 | AssignmentRule, CSymbolTime, EventWithDelay, Parameter | pass | fail | skip | skip | skip | yes |
| 01598 | AssignmentRule, CSymbolTime, EventWithDelay, Parameter | pass | fail | skip | skip | skip | yes |
| 01599 | AssignmentRule, CSymbolTime, EventNoDelay, EventPriority, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01600 | CSymbolTime, EventWithDelay, Parameter | pass | pass | pass | pass | pass | no |
| 01601 | CSymbolTime, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01602 | CSymbolTime, EventWithDelay, Parameter | pass | pass | pass | pass | pass | no |
| 01603 | CSymbolTime, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01604 | CSymbolTime, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01605 | AssignmentRule, CSymbolTime, EventNoDelay, EventPriority, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01626 | AssignmentRule, CSymbolTime, Compartment, EventNoDelay, EventPriority, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01627 | AssignmentRule, CSymbolTime, Compartment, EventNoDelay, EventPriority, Parameter, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01631 | Compartment, InitialAssignment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01633 | Compartment, InitialAssignment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01635 | Compartment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | no |
| 01641 | CSymbolAvogadro, CSymbolTime, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01642 | Compartment, FunctionDefinition, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01643 | Compartment, FunctionDefinition, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01644 | Compartment, FunctionDefinition, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01645 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01646 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01647 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01648 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01649 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01650 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01651 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01652 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01653 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01654 | Compartment, FunctionDefinition, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01655 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01657 | AssignmentRule, Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01658 | CSymbolAvogadro, CSymbolTime, EventNoDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01659 | CSymbolAvogadro, CSymbolTime, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01660 | CSymbolAvogadro, CSymbolTime, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01661 | CSymbolAvogadro, CSymbolTime, EventWithDelay, Parameter | pass | pass | pass | pass | pass | no |
| 01662 | CSymbolAvogadro, CSymbolTime, EventNoDelay, EventPriority, Parameter | pass | pass | fail | pass | fail | yes |
| 01663 | CSymbolAvogadro, EventNoDelay, Parameter | pass | pass | fail | pass | fail | no |
| 01664 | CSymbolAvogadro, CSymbolTime, EventNoDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01665 | CSymbolAvogadro, Parameter, RateRule | pass | pass | pass | pass | pass | yes |
| 01666 | Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01667 | Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01668 | Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01669 | CSymbolTime, Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01670 | CSymbolTime, Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01671 | CSymbolTime, Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01672 | CSymbolTime, Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01673 | CSymbolTime, Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01674 | CSymbolTime, Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01675 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01676 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01677 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01678 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01679 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01680 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01681 | CSymbolTime, Compartment, EventNoDelay, EventPriority, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01682 | CSymbolTime, Compartment, EventNoDelay, EventPriority, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01683 | CSymbolTime, Compartment, EventNoDelay, EventPriority, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01684 | Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01685 | Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01686 | Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01687 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01688 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01689 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01690 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01691 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01692 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01693 | EventNoDelay, FunctionDefinition, Parameter | pass | pass | fail | pass | fail | no |
| 01694 | EventNoDelay, FunctionDefinition, Parameter | pass | pass | fail | pass | fail | no |
| 01695 | EventNoDelay, FunctionDefinition, Parameter | pass | pass | fail | pass | fail | no |
| 01696 | EventNoDelay, FunctionDefinition, Parameter | pass | pass | fail | pass | fail | no |
| 01697 | EventNoDelay, Parameter | pass | pass | fail | pass | fail | no |
| 01698 | EventNoDelay, InitialAssignment, Parameter | pass | pass | fail | pass | fail | no |
| 01699 | EventNoDelay, InitialAssignment, Parameter | pass | pass | fail | pass | fail | no |
| 01700 | EventNoDelay, InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01701 | EventWithDelay, FunctionDefinition, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01702 | EventWithDelay, FunctionDefinition, Parameter, RateRule | pass | pass | fail | pass | fail | yes |
| 01703 | Compartment, EventWithDelay, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01704 | Compartment, EventWithDelay, RateRule, Species | pass | pass | pass | pass | pass | yes |
| 01705 | CSymbolTime, Compartment, EventNoDelay, EventPriority, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01706 | CSymbolTime, Compartment, EventWithDelay, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01707 | CSymbolTime, Compartment, EventWithDelay, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01708 | CSymbolTime, Compartment, EventWithDelay, Parameter, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01709 | CSymbolTime, Compartment, EventWithDelay, Parameter, RateRule, Species | pass | pass | fail | pass | fail | yes |
| 01710 | Compartment, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01711 | Compartment, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01712 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01713 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01714 | CSymbolTime, Compartment, EventNoDelay, EventPriority, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01715 | Compartment, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01716 | Compartment, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01717 | Compartment, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01718 | Compartment, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01719 | Compartment, EventNoDelay, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01720 | CSymbolTime, Compartment, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01721 | CSymbolTime, Compartment, EventWithDelay, Parameter, RateRule, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01722 | CSymbolAvogadro, Compartment, InitialAssignment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01723 | CSymbolAvogadro, Compartment, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01724 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01725 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01726 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01727 | Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01728 | Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01729 | Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01730 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01731 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01732 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01733 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01734 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01735 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01736 | Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01737 | Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01738 | Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01739 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01740 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01741 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01742 | Compartment, FunctionDefinition, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01744 | AssignmentRule, CSymbolTime, Compartment, FunctionDefinition, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01746 | Compartment, InitialAssignment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01748 | AssignmentRule, CSymbolTime, Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01754 | EventWithDelay, InitialAssignment, Parameter | pass | pass | fail | pass | fail | yes |
| 01755 | EventWithDelay, InitialAssignment, Parameter | pass | pass | fail | pass | fail | yes |
| 01756 | EventWithDelay, InitialAssignment, Parameter | pass | pass | fail | pass | fail | yes |
| 01757 | EventWithDelay, InitialAssignment, Parameter | pass | pass | fail | pass | fail | yes |
| 01758 | EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01759 | CSymbolTime, EventNoDelay, EventWithDelay, Parameter | pass | pass | fail | pass | fail | yes |
| 01760 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01761 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01762 | CSymbolAvogadro, Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01763 | CSymbolAvogadro, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01766 | Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01767 | AssignmentRule, Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01768 | Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01769 | Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01770 | Compartment, EventNoDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01771 | Compartment, EventWithDelay, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01772 | Compartment, EventNoDelay, EventPriority, Parameter, Reaction, Species | pass | pass | fail | pass | fail | yes |
| 01773 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01774 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01775 | CSymbolAvogadro, Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01776 | CSymbolAvogadro, Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01777 | CSymbolAvogadro, Compartment, InitialAssignment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01779 | AssignmentRule, CSymbolTime, Compartment, EventNoDelay, Parameter, Species | pass | pass | fail | pass | fail | yes |
| 01780 | AssignmentRule, CSymbolTime, Compartment, EventNoDelay, Parameter, Species | pass | pass | fail | pass | fail | yes |
| 01781 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01782 | AssignmentRule, Parameter | pass | fail | skip | skip | skip | no |
| 01783 | Parameter, RateRule | pass | fail | skip | skip | skip | no |
| 01799 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01800 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01801 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01802 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01803 | Parameter | pass | pass | pass | pass | pass | no |
| 01804 | Compartment, Species | pass | pass | pass | pass | pass | no |
| 01805 | Compartment | pass | pass | pass | pass | pass | no |
| 01806 | Compartment, Species | pass | pass | pass | pass | pass | no |
| 01807 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01808 | Compartment, Parameter, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01809 | Compartment, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01810 | Parameter | pass | pass | pass | pass | pass | no |
| 01811 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01812 | Parameter | pass | pass | pass | pass | pass | no |
| 01813 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01814 | Parameter | pass | pass | pass | pass | pass | no |
| 01815 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01816 | Parameter | pass | pass | pass | pass | pass | no |
| 01817 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01818 | Parameter | pass | pass | pass | pass | pass | no |
| 01819 | InitialAssignment, Parameter | pass | pass | pass | pass | pass | no |
| 01820 | Parameter | fail | pass | fail | pass | fail | yes |
| 01821 | CSymbolTime, InitialAssignment, Parameter | fail | pass | fail | pass | fail | yes |
| 01822 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, RateRule, Reaction, Species | pass | pass | pass | pass | pass | yes |
| 01823 | AssignmentRule, CSymbolRateOf, Compartment, Parameter, RateRule, Species | pass | pass | pass | pass | pass | yes |

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/biomodels.md -->

<!-- generated by sbml2cellml-biomodels, do not edit -->
# BioModels

Manually curated SBML models of [BioModels](https://www.biomodels.org) (the ids in `biomodels/models.json`). Every model is simulated with roadrunner over 0 to 100 time units in 100 steps (`roadrunner`), converted to CellML (`sbml2cellml`), simulated with libopencor (`libopencor`), converted back to SBML (`cellml2sbml`) and simulated with roadrunner again (`roundtrip`). See [Development](development.md#biomodels) for how to run it.

The models have no expected results: the `libopencor` and the `roundtrip` simulation are compared with the `roadrunner` simulation of the original model for every species and every other variable set by a rate rule or an assignment rule. A value passes when `|value - expected| <= absolute + relative * |expected|` with a relative tolerance of `1e-3` and an absolute tolerance of `1e-6`. Both simulators integrate with CVODE with tight tolerances (relative/absolute `1e-9`/`1e-12`) and up to 100000 internal steps between two time points, so the comparison measures the conversion and not the integrator; only when CVODE gives up with these tolerances the simulation is repeated with `1e-8`/`1e-10` and `1e-7`/`1e-9`.

A `roadrunner` failure means roadrunner cannot simulate the model, it says nothing about the converters.

## Summary

1060 cases run, 15 skipped.

![Cases which pass, fail and skip the stages](images/biomodels.svg#only-light)
![Cases which pass, fail and skip the stages](images/biomodels_dark.svg#only-dark)

| stage | total | pass | fail | skip | pass rate |
| --- | --- | --- | --- | --- | --- |
| roadrunner | 1060 | 1043 | 17 | 0 | 98.4% |
| sbml2cellml | 1060 | 1046 | 14 | 0 | 98.7% |
| libopencor | 1060 | 923 | 113 | 24 | 87.1% |
| cellml2sbml | 1060 | 1046 | 0 | 14 | 98.7% |
| roundtrip | 1060 | 936 | 100 | 24 | 88.3% |

867 of the 923 cases with a passing libopencor stage are informative: the expected results move more than the tolerance band for at least one variable.

## Failure reasons

The cases which fail a stage, grouped by their error: errors which differ only in quoted text, numbers and, for the validation of a CellML model, the issues after the first one are one group. Every case is listed with its complete error.

### roadrunner

17 of 1060 cases fail.

**7 cases**

```text
BIOMD0000000024: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(M, parameter_0000009)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
BIOMD0000000025: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(dClk, tau1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
BIOMD0000000034: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(parameter_0000029 * parameter_0000022 + parameter_0000034, parameter_0000039)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
BIOMD0000000154: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(x, tau)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
BIOMD0000000155: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(x, tau)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
BIOMD0000000196: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(x3, tau)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
BIOMD0000000841: SimulationFailure: roadrunner: RuntimeError: Unable to support delay differential equations.  The function 'delay(P, tau1)' is not supported., at llvm::Value* rrllvm::ASTNodeCodeGen::delayExprCodeGen(const libsbml::ASTNode*)
```

**5 cases**

```text
BIOMD0000000137: SimulationFailure: roadrunner: RuntimeError: Unable to support 'fast' reactions.  The reaction 'R12' is set 'fast=true', and is therefore not supported., at void rrllvm::LLVMModelDataSymbols::initReactions(const libsbml::Model*)
BIOMD0000000424: SimulationFailure: roadrunner: RuntimeError: Unable to support 'fast' reactions.  The reaction 'R1' is set 'fast=true', and is therefore not supported., at void rrllvm::LLVMModelDataSymbols::initReactions(const libsbml::Model*)
BIOMD0000000490: SimulationFailure: roadrunner: RuntimeError: Unable to support 'fast' reactions.  The reaction 'v1' is set 'fast=true', and is therefore not supported., at void rrllvm::LLVMModelDataSymbols::initReactions(const libsbml::Model*)
BIOMD0000000512: SimulationFailure: roadrunner: RuntimeError: Unable to support 'fast' reactions.  The reaction 'vA_degr_b' is set 'fast=true', and is therefore not supported., at void rrllvm::LLVMModelDataSymbols::initReactions(const libsbml::Model*)
BIOMD0000000588: SimulationFailure: roadrunner: RuntimeError: Unable to support 'fast' reactions.  The reaction 'R1' is set 'fast=true', and is therefore not supported., at void rrllvm::LLVMModelDataSymbols::initReactions(const libsbml::Model*)
```

**2 cases**

```text
BIOMD0000000659: SimulationFailure: roadrunner: RuntimeError: CVODE Error: CV_CONV_FAILURE: Convergence test failures occurred too many times (= MXNCF = 10) during one internal timestep or occurred with |h| = hmin.; In virtual double rr::CVODEIntegrator::integrate(double, double)
BIOMD0000000711: SimulationFailure: roadrunner: RuntimeError: CVODE Error: CV_CONV_FAILURE: Convergence test failures occurred too many times (= MXNCF = 10) during one internal timestep or occurred with |h| = hmin.; In virtual double rr::CVODEIntegrator::integrate(double, double)
```

**2 cases**

```text
BIOMD0000000527: SimulationFailure: roadrunner: RuntimeError: CVODE Error: CV_TOO_MUCH_WORK: The solver took mxstep (100000) internal steps but could not reach tout.; In virtual double rr::CVODEIntegrator::integrate(double, double)
BIOMD0000000589: SimulationFailure: roadrunner: RuntimeError: CVODE Error: CV_TOO_MUCH_WORK: The solver took mxstep (100000) internal steps but could not reach tout.; In virtual double rr::CVODEIntegrator::integrate(double, double)
```

**1 case**

```text
BIOMD0000000723: SimulationFailure: roadrunner: RuntimeError: CVODE Error: CV_ERR_FAILURE: Error test failures occurred too many times (= MXNEF = 7) during one internal time step oroccurred with |h| = hmin.; In virtual double rr::CVODEIntegrator::integrate(double, double)
```

### sbml2cellml

14 of 1060 cases fail.

**7 cases**

```text
BIOMD0000000024: CellMLValidationError: CellML model 'Scheper1999' converted from 'BIOMD0000000024_url.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
BIOMD0000000025: CellMLValidationError: CellML model 'Smolen2002' converted from 'BIOMD0000000025_url.xml' has 16 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
BIOMD0000000034: CellMLValidationError: CellML model 'model_0000001' converted from 'BIOMD0000000034_url.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
BIOMD0000000154: CellMLValidationError: CellML model 'Zatorsky2006_p53_Model3' converted from 'BIOMD0000000154_url.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
BIOMD0000000155: CellMLValidationError: CellML model 'Zatorsky2006_p53_Model6' converted from 'BIOMD0000000155_url.xml' has 2 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
BIOMD0000000196: CellMLValidationError: CellML model 'Srividhya2006_CellCycle' converted from 'BIOMD0000000196_url.xml' has 4 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
BIOMD0000000841: CellMLValidationError: CellML model 'Dhawan2019___Endogenous_miRNA_sponges_mediate_the_generation_of_oscillatory_dynamics_for_a_non_coding_RNA_network' converted from 'Dhawan2019.xml' has 4 errors:
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
    [ERROR] Math has a 'csymbol' element that is not a supported MathML element.
```

**6 cases**

```text
BIOMD0000000531: CellMLValidationError: CellML model 'MODEL1407170000' converted from 'BIOMD0000000531_url.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'alpha' in component 'sbml' is unknown.
BIOMD0000000532: CellMLValidationError: CellML model 'MODEL1407300000' converted from 'BIOMD0000000532_url.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'X' in component 'sbml' is unknown.
BIOMD0000000555: CellMLValidationError: CellML model 'MODEL1411100000' converted from 'BIOMD0000000555_url.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'Amyloid' in component 'sbml' is unknown.
BIOMD0000000561: CellMLValidationError: CellML model 'MODEL1412110000' converted from 'BIOMD0000000561_url.xml' has 2 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'Amyloid' in component 'sbml' is unknown.
BIOMD0000000566: CellMLValidationError: CellML model 'MODEL1501160000' converted from 'BIOMD0000000566_url.xml' has 3 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'B' in component 'sbml' is unknown.
    [ERROR] The type of variable 'Growth' in component 'sbml' is unknown.
BIOMD0000000567: CellMLValidationError: CellML model 'MODEL1501160001' converted from 'BIOMD0000000567_url.xml' has 3 errors:
    [ERROR] The type of variable 'time' in component 'sbml' is unknown.
    [ERROR] The type of variable 'B' in component 'sbml' is unknown.
    [ERROR] The type of variable 'Growth' in component 'sbml' is unknown.
```

**1 case**

```text
BIOMD0000000437: CellMLValidationError: CellML model 'MODEL1212150000' converted from 'BIOMD0000000437_url.xml' has 4 errors:
    [ERROR] Component 'sbml' contains multiple variables with the name 'time'. Valid variable names must be unique to their component.
    [ERROR] Duplicated identifier attribute 'time' has been found in:
     - variable 'time' in component 'sbml'; and
     - variable 'time' in component 'sbml'.

    [ERROR] Component 'sbml' contains multiple variables with the name 'time'. Valid variable names must be unique to their component.
    [ERROR] Duplicated identifier attribute 'time' has been found in:
     - variable 'time' in component 'sbml'; and
     - variable 'time' in component 'sbml'.
```

### libopencor

113 of 1060 cases fail.

**109 cases, numerical mismatch**

```text
BIOMD0000000001: B exceeds the tolerance by 6.44e-06; DLL exceeds the tolerance by 1.5e-05; D exceeds the tolerance by 9e-06; ILL exceeds the tolerance by 4.91e-06
BIOMD0000000007: Mass exceeds the tolerance by 0.402
BIOMD0000000056: BUB2 exceeds the tolerance by 0.799; BUD exceeds the tolerance by 0.275; C2 exceeds the tolerance by 0.101; C2P exceeds the tolerance by 0.0267; C5 exceeds the tolerance by 0.0222; C5P exceeds the tolerance by 0.00281; CDC14 exceeds the tolerance by 0.361; CDC15 exceeds the tolerance by 0.517; CDC15i exceeds the tolerance by 0.518; CDC20 exceeds the tolerance by 0.313; CDC20i exceeds the tolerance by 0.326; CDC6 exceeds the tolerance by 0.0177; CDC6P exceeds the tolerance by 0.00504; CDC6T exceeds the tolerance by 0.101; CDH1 exceeds the tolerance by 0.451; CDH1i exceeds the tolerance by 0.451; CKIT exceeds the tolerance by 0.202; CLB2 exceeds the tolerance by 0.48; CLB2T exceeds the tolerance by 0.451; CLB5 exceeds the tolerance by 0.18; CLB5T exceeds the tolerance by 0.18; CLN2 exceeds the tolerance by 0.182; ESP1 exceeds the tolerance by 0.142; F2 exceeds the tolerance by 0.111; F2P exceeds the tolerance by 0.0221; F5 exceeds the tolerance by 2.15e-05; F5P exceeds the tolerance by 7.28e-06; IE exceeds the tolerance by 0.158; IEP exceeds the tolerance by 0.158; LTE1 exceeds the tolerance by 0.899; MAD2 exceeds the tolerance by 7.98; MCM1 exceeds the tolerance by 0.232; NET1 exceeds the tolerance by 0.24; NET1P exceeds the tolerance by 0.461; ORI exceeds the tolerance by 6.27; PDS1 exceeds the tolerance by 0.775; PE exceeds the tolerance by 0.141; PPX exceeds the tolerance by 0.242; RENT exceeds the tolerance by 0.756; RENTP exceeds the tolerance by 0.395; SBF exceeds the tolerance by 0.262; SIC1 exceeds the tolerance by 0.00301; SIC1P exceeds the tolerance by 0.00343; SIC1T exceeds the tolerance by 0.101; SPN exceeds the tolerance by 0.0447; SWI5 exceeds the tolerance by 0.141; SWI5P exceeds the tolerance by 0.136; TEM1GDP exceeds the tolerance by 0.896; TEM1GTP exceeds the tolerance by 0.895; Visbf exceeds the tolerance by 3.84; Vppc1 exceeds the tolerance by 1.44; Vppf6 exceeds the tolerance by 1.44; Vaiep exceeds the tolerance by 0.048; Vacdh exceeds the tolerance by 0.289; Vicdh exceeds the tolerance by 0.159; Vkpnet exceeds the tolerance by 0.808; Vppnet exceeds the tolerance by 0.725; Vasbf exceeds the tolerance by 0.123; Vd2c1 exceeds the tolerance by 0.232; Vd2f6 exceeds the tolerance by 0.28; Vkpc1 exceeds the tolerance by 1.85; Vkpf6 exceeds the tolerance by 2.04; Vdb2 exceeds the tolerance by 0.19; Vdb5 exceeds the tolerance by 0.05; Vdpds exceeds the tolerance by 0.0626; Vdppx exceeds the tolerance by 0.305
BIOMD0000000077: H exceeds the tolerance by 0.989; HR exceeds the tolerance by 0.00136; R exceeds the tolerance by 0.00713; HRRH exceeds the tolerance by 0.000975; E exceeds the tolerance by 0.00191; GQ exceeds the tolerance by 0.00181; IP3 exceeds the tolerance by 3.83e+03; CHO exceeds the tolerance by 0.264
BIOMD0000000081: KCNQsites_M exceeds the tolerance by 20.2; PIP2_M exceeds the tolerance by 4.68e+03; oxoM_EX exceeds the tolerance by 9.99; GGTPMg_M exceeds the tolerance by 25.7; GDP_C exceeds the tolerance by 0.234; ip3_C exceeds the tolerance by 2.47; G_M exceeds the tolerance by 1.11; GGTP_M exceeds the tolerance by 7.59; PIP_M exceeds the tolerance by 318; PIP2xKCNQ_M exceeds the tolerance by 20.2; GGDP_M exceeds the tolerance by 33.9; I_KCNQ exceeds the tolerance by 0.778; fGactive exceeds the tolerance by 0.128; OxoSat exceeds the tolerance by 0.555; Gactive exceeds the tolerance by 25.7
BIOMD0000000095: cLc exceeds the tolerance by 28.3; cLm exceeds the tolerance by 4.24; cLn exceeds the tolerance by 29.1; cP7c exceeds the tolerance by 81.7; cP7m exceeds the tolerance by 6.79; cP7n exceeds the tolerance by 8.66; cP9c exceeds the tolerance by 22.1; cP9m exceeds the tolerance by 5.34; cP9n exceeds the tolerance by 13.9; cPn exceeds the tolerance by 0.857; cTc exceeds the tolerance by 0.229; cTm exceeds the tolerance by 1.37; cTn exceeds the tolerance by 6.4; cXc exceeds the tolerance by 13.6; cXm exceeds the tolerance by 5.69; cXn exceeds the tolerance by 33.5; cYc exceeds the tolerance by 23.5; cYm exceeds the tolerance by 4.01; cYn exceeds the tolerance by 3.57
BIOMD0000000096: cLc exceeds the tolerance by 1.09; cLm exceeds the tolerance by 2.62; cLn exceeds the tolerance by 3.59; cP7c exceeds the tolerance by 0.506; cP7m exceeds the tolerance by 0.95; cP7n exceeds the tolerance by 25.8; cP9c exceeds the tolerance by 30.4; cP9m exceeds the tolerance by 0.899; cP9n exceeds the tolerance by 46.1; cPn exceeds the tolerance by 0.847; cTc exceeds the tolerance by 8.07; cTm exceeds the tolerance by 4.92; cTn exceeds the tolerance by 7; cXc exceeds the tolerance by 2.37; cXm exceeds the tolerance by 0.445; cXn exceeds the tolerance by 15.1; cYc exceeds the tolerance by 32; cYm exceeds the tolerance by 1.12; cYn exceeds the tolerance by 11.4
BIOMD0000000097: cLc exceeds the tolerance by 0.611; cLm exceeds the tolerance by 4.27; cLn exceeds the tolerance by 3.58; cP7c exceeds the tolerance by 2.39; cP7m exceeds the tolerance by 1.48; cP7n exceeds the tolerance by 105; cP9c exceeds the tolerance by 5.98; cP9m exceeds the tolerance by 1.36; cP9n exceeds the tolerance by 5.65; cPn exceeds the tolerance by 0.854; cTc exceeds the tolerance by 1.49; cTm exceeds the tolerance by 4.19; cTn exceeds the tolerance by 8.5; cXc exceeds the tolerance by 4.11; cXm exceeds the tolerance by 1.7; cXn exceeds the tolerance by 25.7; cYc exceeds the tolerance by 15.7; cYm exceeds the tolerance by 1.84; cYn exceeds the tolerance by 20.1
BIOMD0000000104: species_0 exceeds the tolerance by 0.115; species_1 exceeds the tolerance by 1; species_2 exceeds the tolerance by 0.6; species_3 exceeds the tolerance by 0.599; species_4 exceeds the tolerance by 0.999
BIOMD0000000117: z exceeds the tolerance by 0.569; y exceeds the tolerance by 1.56; beta exceeds the tolerance by 0.785
BIOMD0000000120: lck_inactive exceeds the tolerance by 5.37; lck_active exceeds the tolerance by 5.58; phosphatase_inactive exceeds the tolerance by 0.707; phosphatase_active exceeds the tolerance by 0.706; lck_total exceeds the tolerance by 5.84
BIOMD0000000121: c3 exceeds the tolerance by 0.556; c2 exceeds the tolerance by 0.107; c1 exceeds the tolerance by 0.21; o exceeds the tolerance by 0.0531; i exceeds the tolerance by 0.195; ik exceeds the tolerance by 0.2; a exceeds the tolerance by 0.0254; b exceeds the tolerance by 0.00782; aa exceeds the tolerance by 0.00791; bb exceeds the tolerance by 0.00402; ai exceeds the tolerance by 0.317; bi exceeds the tolerance by 0.0223; u exceeds the tolerance by 0.0051
BIOMD0000000122: Ca_Nuc exceeds the tolerance by 0.9; Ca_Cyt exceeds the tolerance by 0.9; NFAT_Nuc exceeds the tolerance by 0.000738; Act_C_Nuc exceeds the tolerance by 0.0241; NFAT_Pi_Nuc exceeds the tolerance by 0.000137; NFAT_Act_C_Nuc exceeds the tolerance by 0.0131; NFAT_Pi_Act_C_Nuc exceeds the tolerance by 3.81e-05; Inact_C_Nuc exceeds the tolerance by 0.0256; NFAT_Cyt exceeds the tolerance by 5.89e-05; Act_C_Cyt exceeds the tolerance by 0.00335; NFAT_Pi_Cyt exceeds the tolerance by 0.00525; NFAT_Act_C_Cyt exceeds the tolerance by 0.000262; NFAT_Pi_Act_C_Cyt exceeds the tolerance by 0.000268; Inact_C_Cyt exceeds the tolerance by 0.00609
BIOMD0000000125: x1 exceeds the tolerance by 2; x2 exceeds the tolerance by 4; y2 exceeds the tolerance by 2; x0 exceeds the tolerance by 1
BIOMD0000000126: C1 exceeds the tolerance by 0.287; C2 exceeds the tolerance by 0.137; C3 exceeds the tolerance by 0.914; IC3 exceeds the tolerance by 0.573; IC2 exceeds the tolerance by 0.2; IM1 exceeds the tolerance by 0.279; IM2 exceeds the tolerance by 0.000159; O exceeds the tolerance by 0.15; IF exceeds the tolerance by 0.658; a11 exceeds the tolerance by 4.18; a12 exceeds the tolerance by 3.48; a13 exceeds the tolerance by 2.39; a2 exceeds the tolerance by 2.72; a3 exceeds the tolerance by 0.0123; b3 exceeds the tolerance by 0.000991; a4 exceeds the tolerance by 0.0272; b4 exceeds the tolerance by 0.0123; a5 exceeds the tolerance by 2.76e-05; b5 exceeds the tolerance by 0.000245; Ina exceeds the tolerance by 0.315; b11 exceeds the tolerance by 9.02; b12 exceeds the tolerance by 12; b13 exceeds the tolerance by 16.9; b2 exceeds the tolerance by 0.00952
BIOMD0000000127: v exceeds the tolerance by 40.4; U exceeds the tolerance by 14.4
BIOMD0000000129: v exceeds the tolerance by 52.5; u exceeds the tolerance by 5.95
BIOMD0000000130: v exceeds the tolerance by 45.4; u exceeds the tolerance by 5.61
BIOMD0000000131: v exceeds the tolerance by 50; u exceeds the tolerance by 4.19
BIOMD0000000132: v exceeds the tolerance by 29.7; u exceeds the tolerance by 4.69
BIOMD0000000133: u exceeds the tolerance by 0.687; v exceeds the tolerance by 3.72
BIOMD0000000134: v exceeds the tolerance by 37.2; u exceeds the tolerance by 6.42
BIOMD0000000135: u exceeds the tolerance by 0.819; v exceeds the tolerance by 28.2
BIOMD0000000136: v exceeds the tolerance by 23.6; u exceeds the tolerance by 4.46
BIOMD0000000144: MPFc exceeds the tolerance by 0.0287; preMPFc exceeds the tolerance by 8.2e-05; StgPc exceeds the tolerance by 0.00384; Wee1c exceeds the tolerance by 0.000839; Wee1Pc exceeds the tolerance by 0.00532; Stgm exceeds the tolerance by 0.0984; Xp exceeds the tolerance by 0.0402; Stgc exceeds the tolerance by 0.000863; Xm exceeds the tolerance by 2.32; MPFn exceeds the tolerance by 0.628; preMPFn exceeds the tolerance by 0.199; Wee1Pn exceeds the tolerance by 1.59; Wee1n exceeds the tolerance by 1.05; StgPn exceeds the tolerance by 2.16; Stgn exceeds the tolerance by 1.22; FZYa exceeds the tolerance by 0.991; IEa_1 exceeds the tolerance by 0.748; N exceeds the tolerance by 208; CycBT exceeds the tolerance by 0.0339; StgPT exceeds the tolerance by 0.0119
BIOMD0000000148: z exceeds the tolerance by 13.7
BIOMD0000000162: PA_D_Cytosol exceeds the tolerance by 241; PABCa_D_Cytosol exceeds the tolerance by 4.75e+03; h_D_ERM exceeds the tolerance by 0.089; PABMg_D_Cytosol exceeds the tolerance by 4.49e+03; CG_D_Cytosol exceeds the tolerance by 8.42e+03; D28kB_D_Cytosol exceeds the tolerance by 2.08e+03; PA_Cytosol exceeds the tolerance by 245; CG_Cytosol exceeds the tolerance by 8.61e+03; PABCa_Cytosol exceeds the tolerance by 4.82e+03; D28k_high_Cytosol exceeds the tolerance by 3.34e+03; D28k_high_D_Cytosol exceeds the tolerance by 3.28e+03; D28kB_high_D_Cytosol exceeds the tolerance by 3.32e+03; CGB_D_Cytosol exceeds the tolerance by 8.47e+03; Ca_D_Cytosol exceeds the tolerance by 24.9; CGB_Cytosol exceeds the tolerance by 8.67e+03; D28k_Cytosol exceeds the tolerance by 2.01e+03; D28kB_high_Cytosol exceeds the tolerance by 3.37e+03; PABMg_Cytosol exceeds the tolerance by 4.55e+03; D28k_D_Cytosol exceeds the tolerance by 2.03e+03; Ca_Cytosol exceeds the tolerance by 25.5; h_ERM exceeds the tolerance by 0.0999; D28kB_Cytosol exceeds the tolerance by 2.15e+03
BIOMD0000000234: Effect exceeds the tolerance by 0.754; Ce exceeds the tolerance by 3.24e+04; TumorSize exceeds the tolerance by 4.33
BIOMD0000000235: PROTEIN_E_Apobec exceeds the tolerance by 0.000282; PROTEIN_E_Bra exceeds the tolerance by 0.157; PROTEIN_E_Endo16 exceeds the tolerance by 0.125; PROTEIN_E_Eve exceeds the tolerance by 0.000253; PROTEIN_E_Gcad exceeds the tolerance by 560; PROTEIN_E_Hox exceeds the tolerance by 0.0954; PROTEIN_E_Lim exceeds the tolerance by 0.157; PROTEIN_E_Notch exceeds the tolerance by 13.8; PROTEIN_E_Notch2 exceeds the tolerance by 0.849; PROTEIN_E_OrCt exceeds the tolerance by 0.000282; PROTEIN_E_Otx exceeds the tolerance by 560; PROTEIN_E_Pmar1 exceeds the tolerance by 0.178; PROTEIN_E_SoxB1 exceeds the tolerance by 553; PROTEIN_E_SuH exceeds the tolerance by 8.89; PROTEIN_E_SuHN exceeds the tolerance by 38.5; PROTEIN_E_UMR exceeds the tolerance by 48.8; PROTEIN_E_UVAOtx exceeds the tolerance by 38.7; PROTEIN_E_VEGF exceeds the tolerance by 15.1; PROTEIN_E_cB exceeds the tolerance by 375; PROTEIN_M_Apobec exceeds the tolerance by 0.00127; PROTEIN_M_Blimp1 exceeds the tolerance by 0.0011; PROTEIN_M_Bra exceeds the tolerance by 0.262; PROTEIN_M_Delta exceeds the tolerance by 0.323; PROTEIN_M_Delta2 exceeds the tolerance by 0.108; PROTEIN_M_Endo16 exceeds the tolerance by 0.225; PROTEIN_M_Eve exceeds the tolerance by 0.000573; PROTEIN_M_FoxA exceeds the tolerance by 0.00358; PROTEIN_M_Gcad exceeds the tolerance by 560; PROTEIN_M_Gcm exceeds the tolerance by 0.000958; PROTEIN_M_Hox exceeds the tolerance by 0.188; PROTEIN_M_Lim exceeds the tolerance by 0.262; PROTEIN_M_Notch exceeds the tolerance by 538; PROTEIN_M_Notch2 exceeds the tolerance by 1.46; PROTEIN_M_Nrl exceeds the tolerance by 0.00142; PROTEIN_M_OrCt exceeds the tolerance by 0.00127; PROTEIN_M_Otx exceeds the tolerance by 560; PROTEIN_M_Pmar1 exceeds the tolerance by 0.278; PROTEIN_M_SoxB1 exceeds the tolerance by 559; PROTEIN_M_SuH exceeds the tolerance by 80.5; PROTEIN_M_SuHN exceeds the tolerance by 928; PROTEIN_M_UMADelta exceeds the tolerance by 36.6; PROTEIN_M_UMANrl exceeds the tolerance by 15; PROTEIN_M_UMR exceeds the tolerance by 48.8; PROTEIN_M_UbiqSoxB1 exceeds the tolerance by 560; PROTEIN_M_cB exceeds the tolerance by 375; PROTEIN_P_Alx1 exceeds the tolerance by 36.4; PROTEIN_P_CyP exceeds the tolerance by 1.56; PROTEIN_P_Delta exceeds the tolerance by 12.6; PROTEIN_P_Delta2 exceeds the tolerance by 30.3; PROTEIN_P_Dri exceeds the tolerance by 1.52; PROTEIN_P_Erg exceeds the tolerance by 1.38; PROTEIN_P_Ets1 exceeds the tolerance by 559; PROTEIN_P_Ficolin exceeds the tolerance by 1.96; PROTEIN_P_FoxB exceeds the tolerance by 0.0432; PROTEIN_P_FoxO exceeds the tolerance by 1.45; PROTEIN_P_GataC exceeds the tolerance by 0.0408; PROTEIN_P_Gcad exceeds the tolerance by 560; PROTEIN_P_HesC exceeds the tolerance by 0.912; PROTEIN_P_Hex exceeds the tolerance by 1.5; PROTEIN_P_Hnf6 exceeds the tolerance by 33.8; PROTEIN_P_L1 exceeds the tolerance by 29.2; PROTEIN_P_Msp130 exceeds the tolerance by 1.17; PROTEIN_P_MspL exceeds the tolerance by 1.36; PROTEIN_P_Nrl exceeds the tolerance by 0.0522; PROTEIN_P_Sm27 exceeds the tolerance by 1.23; PROTEIN_P_Sm50 exceeds the tolerance by 1.18; PROTEIN_P_SoxC exceeds the tolerance by 2.74; PROTEIN_P_TBr exceeds the tolerance by 1.63; PROTEIN_P_Tel exceeds the tolerance by 0.515; PROTEIN_P_Tgif exceeds the tolerance by 1.45; PROTEIN_P_UbiqAlx1 exceeds the tolerance by 560; PROTEIN_P_UbiqES exceeds the tolerance by 560; PROTEIN_P_UbiqEts1 exceeds the tolerance by 560; PROTEIN_P_UbiqHesC exceeds the tolerance by 560; PROTEIN_P_UbiqHnf6 exceeds the tolerance by 560; PROTEIN_P_UbiqSoxC exceeds the tolerance by 560; PROTEIN_P_UbiqTel exceeds the tolerance by 560; PROTEIN_P_VEGFR exceeds the tolerance by 6.36; PROTEIN_P_VEGFSignal exceeds the tolerance by 16.4; PROTEIN_P_cB exceeds the tolerance by 375; mRNA_E_Apobec exceeds the tolerance by 4.28e-05; mRNA_E_Bra exceeds the tolerance by 0.0243; mRNA_E_Endo16 exceeds the tolerance by 0.0194; mRNA_E_Eve exceeds the tolerance by 3.84e-05; mRNA_E_Gcad exceeds the tolerance by 84; mRNA_E_Hox exceeds the tolerance by 0.015; mRNA_E_Lim exceeds the tolerance by 0.0243; mRNA_E_Notch exceeds the tolerance by 6.64; mRNA_E_OrCt exceeds the tolerance by 4.28e-05; mRNA_E_Otx exceeds the tolerance by 84; mRNA_E_Pmar1 exceeds the tolerance by 0.0274; mRNA_E_SoxB1 exceeds the tolerance by 83; mRNA_E_SuH exceeds the tolerance by 3.94; mRNA_E_UMR exceeds the tolerance by 11.8; mRNA_E_UVAOtx exceeds the tolerance by 9.13; mRNA_E_VEGF exceeds the tolerance by 3.94; mRNA_E_cB exceeds the tolerance by 84; mRNA_M_Apobec exceeds the tolerance by 0.00019; mRNA_M_Blimp1 exceeds the tolerance by 0.000166; mRNA_M_Bra exceeds the tolerance by 0.0394; mRNA_M_Delta exceeds the tolerance by 0.074; mRNA_M_Endo16 exceeds the tolerance by 0.0338; mRNA_M_Eve exceeds the tolerance by 8.57e-05; mRNA_M_FoxA exceeds the tolerance by 0.000537; mRNA_M_Gcad exceeds the tolerance by 84; mRNA_M_Gcm exceeds the tolerance by 0.000148; mRNA_M_Hox exceeds the tolerance by 0.0282; mRNA_M_Lim exceeds the tolerance by 0.0394; mRNA_M_Notch exceeds the tolerance by 84; mRNA_M_Nrl exceeds the tolerance by 0.000215; mRNA_M_OrCt exceeds the tolerance by 0.00019; mRNA_M_Otx exceeds the tolerance by 84.1; mRNA_M_Pmar1 exceeds the tolerance by 0.0418; mRNA_M_SoxB1 exceeds the tolerance by 83.8; mRNA_M_SuH exceeds the tolerance by 13.6; mRNA_M_UMADelta exceeds the tolerance by 8.03; mRNA_M_UMANrl exceeds the tolerance by 3.94; mRNA_M_UMR exceeds the tolerance by 11.8; mRNA_M_UbiqSoxB1 exceeds the tolerance by 84; mRNA_M_cB exceeds the tolerance by 84; mRNA_P_Alx1 exceeds the tolerance by 5.59; mRNA_P_CyP exceeds the tolerance by 0.235; mRNA_P_Delta exceeds the tolerance by 2.81; mRNA_P_Dri exceeds the tolerance by 0.229; mRNA_P_Erg exceeds the tolerance by 0.21; mRNA_P_Ets1 exceeds the tolerance by 84.3; mRNA_P_Ficolin exceeds the tolerance by 0.328; mRNA_P_FoxB exceeds the tolerance by 0.00663; mRNA_P_FoxO exceeds the tolerance by 0.218; mRNA_P_GataC exceeds the tolerance by 0.0085; mRNA_P_Gcad exceeds the tolerance by 84; mRNA_P_HesC exceeds the tolerance by 0.14; mRNA_P_Hex exceeds the tolerance by 0.226; mRNA_P_Hnf6 exceeds the tolerance by 5.7; mRNA_P_L1 exceeds the tolerance by 6.64; mRNA_P_Msp130 exceeds the tolerance by 0.179; mRNA_P_MspL exceeds the tolerance by 0.205; mRNA_P_Nrl exceeds the tolerance by 0.00857; mRNA_P_Sm27 exceeds the tolerance by 0.249; mRNA_P_Sm50 exceeds the tolerance by 0.241; mRNA_P_SoxC exceeds the tolerance by 0.463; mRNA_P_TBr exceeds the tolerance by 0.26; mRNA_P_Tel exceeds the tolerance by 0.105; mRNA_P_Tgif exceeds the tolerance by 0.218; mRNA_P_UbiqAlx1 exceeds the tolerance by 84; mRNA_P_UbiqES exceeds the tolerance by 84; mRNA_P_UbiqEts1 exceeds the tolerance by 84; mRNA_P_UbiqHesC exceeds the tolerance by 84; mRNA_P_UbiqHnf6 exceeds the tolerance by 84; mRNA_P_UbiqSoxC exceeds the tolerance by 84; mRNA_P_UbiqTel exceeds the tolerance by 84; mRNA_P_VEGFR exceeds the tolerance by 0.214; mRNA_P_cB exceeds the tolerance by 84
BIOMD0000000241: X_gut exceeds the tolerance by 4.08e-05; C_p exceeds the tolerance by 5.08; C_per exceeds the tolerance by 7.34; C_e exceeds the tolerance by 5.42; C_t exceeds the tolerance by 5.24; E exceeds the tolerance by 6.28
BIOMD0000000248: CK_flux_mM exceeds the tolerance by 4.57e-07
BIOMD0000000256: PC3 exceeds the tolerance by 0.000629; XIAP exceeds the tolerance by 0.00015; C3 exceeds the tolerance by 0.0113; XIAP_C3 exceeds the tolerance by 0.00126; BIR12 exceeds the tolerance by 0.00442; BIR12_C3 exceeds the tolerance by 0.038; BIR3R exceeds the tolerance by 0.00252; BIR3R_p2frag exceeds the tolerance by 0.00994; XIAP_2SMAC exceeds the tolerance by 0.000538; BIR12_SMAC exceeds the tolerance by 0.00035; BIR3R_SMAC exceeds the tolerance by 1.11e-05; SMAC exceeds the tolerance by 0.003; Substrate exceeds the tolerance by 1.45e-05; SMAC_norm exceeds the tolerance by 0.0476; XIAP_2SMAC_norm exceeds the tolerance by 0.00855; C9norm exceeds the tolerance by 4.22e-06; C3norm exceeds the tolerance by 0.094; PC3norm exceeds the tolerance by 0.00525; XIAP_norm exceeds the tolerance by 0.0024; XIAP_C3_norm exceeds the tolerance by 0.02; XIAP_C9_norm exceeds the tolerance by 1.31e-06; XIAP_p2frag_norm exceeds the tolerance by 2.71e-06; BIR12_norm exceeds the tolerance by 0.0702; BIR3R_norm exceeds the tolerance by 0.04; BIR12_C3_norm exceeds the tolerance by 0.604; BIR3R_C9_norm exceeds the tolerance by 4.46e-06; BIR3R_p2frag_norm exceeds the tolerance by 0.158
BIOMD0000000265: CDc20 exceeds the tolerance by 0.697; CDh1 exceeds the tolerance by 0.999; CYCA exceeds the tolerance by 19.3; CYCB exceeds the tolerance by 3.29; CYCD exceeds the tolerance by 0.437; CYCE exceeds the tolerance by 1.14; var2 exceeds the tolerance by 4.37; var5 exceeds the tolerance by 4.32; GM exceeds the tolerance by 181; var1 exceeds the tolerance by 5.21; CDc20T exceeds the tolerance by 3.04; MASS exceeds the tolerance by 225; P27 exceeds the tolerance by 1.07; CA exceeds the tolerance by 0.487; CD exceeds the tolerance by 0.436; CE exceeds the tolerance by 0.762; var3 exceeds the tolerance by 4.6; var6 exceeds the tolerance by 2.47; IEP exceeds the tolerance by 0.799; var4 exceeds the tolerance by 0.481; PP1A exceeds the tolerance by 0.833; V2 exceeds the tolerance by 20.6; V4 exceeds the tolerance by 316; V6 exceeds the tolerance by 1.09e+03; V8 exceeds the tolerance by 389; CYCET exceeds the tolerance by 1.3; CYCAT exceeds the tolerance by 19.3; P27T exceeds the tolerance by 1.8
BIOMD0000000281: GLU exceeds the tolerance by 0.003; ENZ exceeds the tolerance by 8.62e-06; ENG exceeds the tolerance by 8.61e-06; TP1 exceeds the tolerance by 0.000249; ADP exceeds the tolerance by 0.0001; GLP exceeds the tolerance by 4.5e-05; ETZ exceeds the tolerance by 1.94e-06; ETG exceeds the tolerance by 1.95e-06; GPP exceeds the tolerance by 8.49e-05; DHA exceeds the tolerance by 0.00016; DPN exceeds the tolerance by 8.35e-07; DPH exceeds the tolerance by 1.36e-05; PID exceeds the tolerance by 0.000498; DGA exceeds the tolerance by 4.93e-05; PGA exceeds the tolerance by 5.02e-05; PYR exceeds the tolerance by 2.98e-05; LAC exceeds the tolerance by 0.00015; DIN exceeds the tolerance by 2.64e-05; DIH exceeds the tolerance by 2.64e-05; XI exceeds the tolerance by 4.09e-05; XSI exceeds the tolerance by 6.14e-06; OXY exceeds the tolerance by 7.45e-05; XSP exceeds the tolerance by 4.62e-05; TP2 exceeds the tolerance by 0.000245; AGP exceeds the tolerance by 7.82e-05; MOD exceeds the tolerance by 1.22e-05; MOB exceeds the tolerance by 4.89e-06; MOX exceeds the tolerance by 6.34e-06; GLU_0 exceeds the tolerance by 0.999; ENZ_0 exceeds the tolerance by 0.943; ENG_0 exceeds the tolerance by 0.942; TP1_0 exceeds the tolerance by 0.167; ADP_0 exceeds the tolerance by 0.101; GLP_0 exceeds the tolerance by 0.046; ETZ_0 exceeds the tolerance by 0.294; ETG_0 exceeds the tolerance by 0.295; GPP_0 exceeds the tolerance by 0.0859; GAP_0 exceeds the tolerance by 0.00194; DHA_0 exceeds the tolerance by 0.124; DPN_0 exceeds the tolerance by 0.00734; DPH_0 exceeds the tolerance by 0.0729; PID_0 exceeds the tolerance by 0.0998; DGA_0 exceeds the tolerance by 0.251; PGA_0 exceeds the tolerance by 0.256; PYR_0 exceeds the tolerance by 0.0154; LAC_0 exceeds the tolerance by 0.126; DIN_0 exceeds the tolerance by 0.391; DIH_0 exceeds the tolerance by 0.391; XI_0 exceeds the tolerance by 0.698; XSI_0 exceeds the tolerance by 0.119; OXY_0 exceeds the tolerance by 0.151; XSP_0 exceeds the tolerance by 0.786; TP2_0 exceeds the tolerance by 0.164; PUE_0 exceeds the tolerance by 0.245; AGP_0 exceeds the tolerance by 0.0609; MOD_0 exceeds the tolerance by 0.264; MOB_0 exceeds the tolerance by 0.0589; MOX_0 exceeds the tolerance by 0.147
BIOMD0000000285: PolyQ exceeds the tolerance by 5.72; Proteasome exceeds the tolerance by 15.1; NatP exceeds the tolerance by 181; MisP exceeds the tolerance by 38.9; MisP_Proteasome exceeds the tolerance by 0.0707; AggPolyQ1 exceeds the tolerance by 1.24; AggPolyQ2 exceeds the tolerance by 0.00154; AggPolyQ3 exceeds the tolerance by 2.79e-07; AggP_Proteasome exceeds the tolerance by 0.000306; mRFPu exceeds the tolerance by 0.743; mRFPu_Proteasome exceeds the tolerance by 11.7; PolyQ_Proteasome exceeds the tolerance by 4.37; ROS exceeds the tolerance by 0.00326; p38_P exceeds the tolerance by 0.452; p38 exceeds the tolerance by 0.352; p38death exceeds the tolerance by 1.1e-06; oligomers exceeds the tolerance by 1.24
BIOMD0000000297: Trim exceeds the tolerance by 0.047; Clb exceeds the tolerance by 0.117; Sic exceeds the tolerance by 0.00128; PTrim exceeds the tolerance by 0.0673; PClb exceeds the tolerance by 0.0687; SBF exceeds the tolerance by 0.13; IE exceeds the tolerance by 0.00444; Cdc20a exceeds the tolerance by 1.7e-05; Cdc20 exceeds the tolerance by 0.0379; Cdh1 exceeds the tolerance by 0.00409; Swe1 exceeds the tolerance by 0.109; Swe1M exceeds the tolerance by 0.0842; PSwe1 exceeds the tolerance by 0.00183; PSwe1M exceeds the tolerance by 0.02; Mih1a exceeds the tolerance by 0.0593; Mcm exceeds the tolerance by 0.183; BE exceeds the tolerance by 0.0215; Cln exceeds the tolerance by 0.0548; kswe exceeds the tolerance by 0.218; Swe1T exceeds the tolerance by 0.00935; IEin exceeds the tolerance by 0.00345; Cdh1in exceeds the tolerance by 0.00309; Mih1 exceeds the tolerance by 0.0584; Mcmin exceeds the tolerance by 0.183; SBFin exceeds the tolerance by 0.13
BIOMD0000000301: taRNA exceeds the tolerance by 0.711; mGFPcr exceeds the tolerance by 2.17; pT7 exceeds the tolerance by 1.04; pGFP exceeds the tolerance by 34.2; ara exceeds the tolerance by 0.00969; pT3 exceeds the tolerance by 0.413; mT3cr exceeds the tolerance by 2.94
BIOMD0000000316: X exceeds the tolerance by 0.999; Y exceeds the tolerance by 0.992; Z exceeds the tolerance by 0.986
BIOMD0000000317: X exceeds the tolerance by 0.992; Z1 exceeds the tolerance by 0.998; Z2 exceeds the tolerance by 0.986; Z3 exceeds the tolerance by 0.965
BIOMD0000000318: MC exceeds the tolerance by 0.427; EF exceeds the tolerance by 1; CD exceeds the tolerance by 0.0931; CE exceeds the tolerance by 0.162; RB exceeds the tolerance by 0.447; RE exceeds the tolerance by 0.295; RP exceeds the tolerance by 0.474
BIOMD0000000327: bi exceeds the tolerance by 0.541; ci exceeds the tolerance by 57.7; ni exceeds the tolerance by 2.68; bl exceeds the tolerance by 106; cl exceeds the tolerance by 106; eb exceeds the tolerance by 0.0396; enbc exceeds the tolerance by 0.00791; ec exceeds the tolerance by 0.0439; ena exceeds the tolerance by 0.0061; kccf exceeds the tolerance by 85.3; kbcf exceeds the tolerance by 7.33; v exceeds the tolerance by 0.0535; jnbc exceeds the tolerance by 0.11; jbcftr exceeds the tolerance by 0.0469; jccftr exceeds the tolerance by 0.153; japl exceeds the tolerance by 0.00501; japbl exceeds the tolerance by 0.000643; jlum exceeds the tolerance by 0.01; jnak exceeds the tolerance by 0.0238; jnaleak exceeds the tolerance by 0.0214
BIOMD0000000337: S exceeds the tolerance by 0.0584; N1 exceeds the tolerance by 100; N2 exceeds the tolerance by 9.99
BIOMD0000000338: IIa exceeds the tolerance by 0.0117; VIII exceeds the tolerance by 0.697; VIIIa exceeds the tolerance by 0.00139; APC_PS exceeds the tolerance by 0.0923; IX exceeds the tolerance by 54; IXa exceeds the tolerance by 0.102; XIa exceeds the tolerance by 0.142; XI exceeds the tolerance by 28.4; XIIa exceeds the tolerance by 0.225; VII exceeds the tolerance by 5.79; VIIa exceeds the tolerance by 0.00189; X exceeds the tolerance by 92.5; Xa exceeds the tolerance by 0.0337; IXa_VIIIa exceeds the tolerance by 0.00067; V exceeds the tolerance by 26.3; Va exceeds the tolerance by 0.0554; II exceeds the tolerance by 118; F exceeds the tolerance by 124; Fg exceeds the tolerance by 8.56e+03; DP exceeds the tolerance by 2.34e+03; P exceeds the tolerance by 4.68; XF exceeds the tolerance by 347; XIII exceeds the tolerance by 23.6; Pg exceeds the tolerance by 1.75e+03; APC exceeds the tolerance by 0.00821; IIa_Tmod exceeds the tolerance by 0.0407; PC exceeds the tolerance by 39.5; Tmod exceeds the tolerance by 14.7; Xa_TFPI exceeds the tolerance by 0.00841; TFPI exceeds the tolerance by 0.00592; PS exceeds the tolerance by 169; VKH2 exceeds the tolerance by 0.0649; Va_Xa exceeds the tolerance by 0.000157; XII exceeds the tolerance by 375; K exceeds the tolerance by 1.42; VK exceeds the tolerance by 0.513; VKO exceeds the tolerance by 0.0665; Pk exceeds the tolerance by 433; FDP exceeds the tolerance by 137; D exceeds the tolerance by 2.2e+03; TAT exceeds the tolerance by 719; XIIIa exceeds the tolerance by 24.5; VK_p exceeds the tolerance by 0.173; Integral_Fibrin exceeds the tolerance by 1.08e+04
BIOMD0000000339: IIa exceeds the tolerance by 0.0154; VIII exceeds the tolerance by 0.638; VIIIa exceeds the tolerance by 0.0013; APC_PS exceeds the tolerance by 0.0993; IX exceeds the tolerance by 34.6; IXa exceeds the tolerance by 0.0881; XIa exceeds the tolerance by 0.142; XI exceeds the tolerance by 28.3; XIIa exceeds the tolerance by 0.225; VII exceeds the tolerance by 6.63; VIIa exceeds the tolerance by 0.00174; X exceeds the tolerance by 31; Xa exceeds the tolerance by 0.111; IXa_VIIIa exceeds the tolerance by 0.000494; V exceeds the tolerance by 22.5; Va exceeds the tolerance by 0.0481; II exceeds the tolerance by 107; F exceeds the tolerance by 113; Fg exceeds the tolerance by 4.14e+03; DP exceeds the tolerance by 2.33e+03; P exceeds the tolerance by 4.39; XF exceeds the tolerance by 153; XIII exceeds the tolerance by 12.3; Pg exceeds the tolerance by 1.54e+03; APC exceeds the tolerance by 0.00748; IIa_Tmod exceeds the tolerance by 0.0465; PC exceeds the tolerance by 33.7; Tmod exceeds the tolerance by 10.2; TF exceeds the tolerance by 183; VIIa_TF exceeds the tolerance by 0.0467; VII_TF exceeds the tolerance by 0.00539; Xa_TFPI exceeds the tolerance by 0.027; TFPI exceeds the tolerance by 0.0248; PS exceeds the tolerance by 169; VKH2 exceeds the tolerance by 0.0649; Va_Xa exceeds the tolerance by 0.00066; XII exceeds the tolerance by 375; K exceeds the tolerance by 1.42; VK exceeds the tolerance by 0.513; VKO exceeds the tolerance by 0.0665; Pk exceeds the tolerance by 433; FDP exceeds the tolerance by 141; D exceeds the tolerance by 2.19e+03; TAT exceeds the tolerance by 835; VIIa_TF_Xa_TFPI exceeds the tolerance by 0.00025; XIIIa exceeds the tolerance by 18.3; VK_p exceeds the tolerance by 0.173; Integral_Fibrin exceeds the tolerance by 5.16e+03
BIOMD0000000340: IX exceeds the tolerance by 53.5; VII exceeds the tolerance by 6.72; X exceeds the tolerance by 89; II exceeds the tolerance by 522; PC exceeds the tolerance by 38.8; PS exceeds the tolerance by 148; VKH2 exceeds the tolerance by 0.0689; VK exceeds the tolerance by 0.00801; C_warf exceeds the tolerance by 0.896; VKO exceeds the tolerance by 0.0259; A_warf exceeds the tolerance by 1.47
BIOMD0000000404: Bias exceeds the tolerance by 0.24
BIOMD0000000408: ADPi exceeds the tolerance by 15.4; ATPi exceeds the tolerance by 9.85; Cri exceeds the tolerance by 672; PCri exceeds the tolerance by 677; PCr exceeds the tolerance by 677; ADP exceeds the tolerance by 28.2; ATP exceeds the tolerance by 22.7; Cr exceeds the tolerance by 672; P_ii exceeds the tolerance by 704; P_i exceeds the tolerance by 705; tmito exceeds the tolerance by 3.73; densyn exceeds the tolerance by 3.85; jsyn exceeds the tolerance by 194; vatpnorm exceeds the tolerance by 1.29; j_diff_pcr exceeds the tolerance by 23; j_diff_atp exceeds the tolerance by 170; r_diff_pcr exceeds the tolerance by 0.0694; phase exceeds the tolerance by 0.75; j_ck_mi exceeds the tolerance by 99; j_ck_mm exceeds the tolerance by 1.27e+03; j_diff_adp exceeds the tolerance by 170; j_diff_pi exceeds the tolerance by 166; j_diff_cr exceeds the tolerance by 23
BIOMD0000000436: HETE exceeds the tolerance by 5.34; PGH2 exceeds the tolerance by 12.7; PGE2 exceeds the tolerance by 20.5; PGF2a exceeds the tolerance by 6.12; PGD2 exceeds the tolerance by 147; PGJ2 exceeds the tolerance by 102; dPGJ2 exceeds the tolerance by 27.3; AA exceeds the tolerance by 286; GPCho exceeds the tolerance by 0.249; dPGD2 exceeds the tolerance by 73.7; LPSactivity exceeds the tolerance by 0.666; DGactivity exceeds the tolerance by 91.9; GPChoratio exceeds the tolerance by 49
BIOMD0000000439: R exceeds the tolerance by 0.044; L exceeds the tolerance by 0.0999; RL exceeds the tolerance by 0.0998; Gabg exceeds the tolerance by 0.051; RGabgL exceeds the tolerance by 0.00102; GaGTP exceeds the tolerance by 7.99e-07; Gbg exceeds the tolerance by 0.0252; RGSGaGTP exceeds the tolerance by 0.0216; GaGDPP exceeds the tolerance by 5.32e-05; GaGTPEffector exceeds the tolerance by 0.00296; inertGaGTP exceeds the tolerance by 3.65e-08; RGSinertGaGTP exceeds the tolerance by 0.00652; GaGDP exceeds the tolerance by 8e-06; P exceeds the tolerance by 0.00542; z1 exceeds the tolerance by 0.00276; z2 exceeds the tolerance by 0.00263; z3 exceeds the tolerance by 0.00254
BIOMD0000000479: L exceeds the tolerance by 0.0999; R exceeds the tolerance by 0.0425; LR exceeds the tolerance by 0.0998; Gabg exceeds the tolerance by 0.0419; RGabg exceeds the tolerance by 0.0825; LRGabg exceeds the tolerance by 0.000886; RRGSm exceeds the tolerance by 4.02e-05; LRRGSm exceeds the tolerance by 7.13e-05; RRGSmGabg exceeds the tolerance by 0.172; LRRGSmGabg exceeds the tolerance by 0.000153; GaGTP exceeds the tolerance by 2.78e-06; Gbg exceeds the tolerance by 0.0351; GaGTPEffector exceeds the tolerance by 0.00917; RGSc exceeds the tolerance by 0.00268; RGSm exceeds the tolerance by 0.174; RGSmGaGTP exceeds the tolerance by 0.0179; GaGTPEffectorOFF exceeds the tolerance by 7.41e-06; RGSmGaGTPEffectorOFF exceeds the tolerance by 0.0203; GaGDPP exceeds the tolerance by 4.44e-05; LRRGSmGaGTPEffectorOFF exceeds the tolerance by 1.41e-06; GaGDP exceeds the tolerance by 4.91e-06; P exceeds the tolerance by 0.00455; z1 exceeds the tolerance by 0.00858; z2 exceeds the tolerance by 0.0082; z3 exceeds the tolerance by 0.00791
BIOMD0000000480: species_10 exceeds the tolerance by 1.86; s9 exceeds the tolerance by 1.27e+05; s13 exceeds the tolerance by 7.11e+04; s15 exceeds the tolerance by 6.77e+04; s16 exceeds the tolerance by 1.41e+05; s19 exceeds the tolerance by 2.46e+04; s21 exceeds the tolerance by 6.74e+04; s22 exceeds the tolerance by 1.92e+03; s25 exceeds the tolerance by 2.02e+05; s17 exceeds the tolerance by 1.66e+04; species_1 exceeds the tolerance by 2.92e+05; species_2 exceeds the tolerance by 2.1e+05; species_3 exceeds the tolerance by 3.89e+04; species_4 exceeds the tolerance by 2.65e+05; species_5 exceeds the tolerance by 0.189; s4 exceeds the tolerance by 2.17e+05; s26 exceeds the tolerance by 2.15e+05; s27 exceeds the tolerance by 3.43e+05; s29 exceeds the tolerance by 5.73e+05; s30 exceeds the tolerance by 9.41e+04; s31 exceeds the tolerance by 8.56e+04; s33 exceeds the tolerance by 1.39e+05; species_6 exceeds the tolerance by 5.57e+05; species_8 exceeds the tolerance by 2.48e+05; species_9 exceeds the tolerance by 2.5e+03; parameter_17 exceeds the tolerance by 1.83; parameter_18 exceeds the tolerance by 0.133; parameter_79 exceeds the tolerance by 1.32e+03; parameter_67 exceeds the tolerance by 0.00133; parameter_68 exceeds the tolerance by 0.000819; parameter_69 exceeds the tolerance by 0.000893; parameter_71 exceeds the tolerance by 0.256; parameter_72 exceeds the tolerance by 0.165; parameter_73 exceeds the tolerance by 0.199; parameter_82 exceeds the tolerance by 8.95; parameter_83 exceeds the tolerance by 7.8; parameter_84 exceeds the tolerance by 3.34; parameter_80 exceeds the tolerance by 579; parameter_81 exceeds the tolerance by 248
BIOMD0000000494: AF1 exceeds the tolerance by 0.6; AF2 exceeds the tolerance by 43.3; E2 exceeds the tolerance by 174; FSH_R exceeds the tolerance by 0.563; FSH_bld exceeds the tolerance by 11.4; FSH_pit exceeds the tolerance by 1.18e+04; GnRH exceeds the tolerance by 0.0646; GnRH_R_a exceeds the tolerance by 0.000242; GnRH_R_i exceeds the tolerance by 0.000218; InhA exceeds the tolerance by 5.74; InhA_delay exceeds the tolerance by 25.2; InhB exceeds the tolerance by 112; LH_Pit exceeds the tolerance by 1.06e+05; LH_R exceeds the tolerance by 1.66; LH_bld exceeds the tolerance by 119; Lut1 exceeds the tolerance by 0.106; Lut2 exceeds the tolerance by 0.0614; Lut3 exceeds the tolerance by 0.0242; Lut4 exceeds the tolerance by 0.00636; OvF exceeds the tolerance by 0.085; P4 exceeds the tolerance by 0.726; PrF exceeds the tolerance by 2.88; R_FSH exceeds the tolerance by 1.85; R_FSH_des exceeds the tolerance by 1.28; R_Foll exceeds the tolerance by 0.333; R_GnRH_a exceeds the tolerance by 0.00216; R_GnRH_i exceeds the tolerance by 0.000544; R_LH exceeds the tolerance by 6.09; R_LH_des exceeds the tolerance by 4.42; Sc1 exceeds the tolerance by 0.269; Sc2 exceeds the tolerance by 0.164; AF3 exceeds the tolerance by 5.99; AF4 exceeds the tolerance by 0.0864; Ago_c exceeds the tolerance by 0.183; Ago_d exceeds the tolerance by 99.9; Ago_R_i exceeds the tolerance by 0.000578; Ago_R_a exceeds the tolerance by 0.000596; Ant_d exceeds the tolerance by 499; Ant_c exceeds the tolerance by 0.492; Ant_p exceeds the tolerance by 0.62; Ant_R exceeds the tolerance by 0.00182; s113 exceeds the tolerance by 499; s114 exceeds the tolerance by 14.3; s115 exceeds the tolerance by 14.3; s116 exceeds the tolerance by 4.78e-05; freq exceeds the tolerance by 10.4; mass exceeds the tolerance by 0.00163
BIOMD0000000534: mwf626e95e_543f_41e4_aad4_c6bf60ab345b exceeds the tolerance by 4.73e-05; mw810ff751_fa4e_4143_bd50_169b3e325e1e exceeds the tolerance by 0.00157; mw114aa90f_5f5b_4fe8_9406_361c8489b6a1 exceeds the tolerance by 18.5; mw30ae63db_6cd3_4b6f_93ad_3350cd360bcc exceeds the tolerance by 0.281; mw03db56ac_8dc6_4931_ae82_fef706d2ee3d exceeds the tolerance by 1.87e-05; mwf345ed7a_0622_403c_b816_c8749a2c9ded exceeds the tolerance by 227; mw1da111f2_a036_4392_8512_015005bdcbb7 exceeds the tolerance by 0.0996; mw80848184_e2dd_47ce_86d7_7a21479342bd exceeds the tolerance by 0.000589; mwd2d9d93a_3bd1_4f17_bac1_baba9ef2d55a exceeds the tolerance by 2.18e-07; mw4638f126_8cb8_4021_ab41_6ae195743ba0 exceeds the tolerance by 1.63e-05; mw0adf3eb4_a196_4c48_b10d_4e9e9faaf9e1 exceeds the tolerance by 5.78e-05; mw0eb6c959_d408_45a0_a450_928b8c5876bb exceeds the tolerance by 0.00907; mw42054cd7_17af_46da_970c_7f99151906ad exceeds the tolerance by 0.491; mw39c2e431_fdc3_4964_be29_6ca856620b1b exceeds the tolerance by 0.5; mwd5313618_89eb_4c8c_bc82_66f10f966349 exceeds the tolerance by 14.5; mw2e464cf3_a09c_4b7c_9f3c_06720016a48e exceeds the tolerance by 0.395; mw36ea78c1_ed71_4def_96d3_857a442d7195 exceeds the tolerance by 34.6; mwab41493c_6349_45f1_a226_3030cfed0e06 exceeds the tolerance by 0.00207; mwf405687b_7401_44ec_a0d6_4a2b35c13e8a exceeds the tolerance by 0.0572; mw3667a5e1_02c9_44a0_acb4_b0431faa822d exceeds the tolerance by 79.8; mw7becb5fe_8da8_4285_a821_0d77ad811b62 exceeds the tolerance by 2.25e-05; mw8c9107e6_f51d_442d_b2dc_2bfdbb8482ca exceeds the tolerance by 0.000903; mw824bc3d4_1ac3_4912_9b51_8f14ff1c96b9 exceeds the tolerance by 5.96e-07; mw6cce2109_0e32_4dd9_98ec_41173e8ef07d exceeds the tolerance by 0.0121; mw2b255f94_8018_4b99_bde8_918eeac45446 exceeds the tolerance by 0.672; mw48867e93_f170_44e8_ac7a_185b23e1bf3b exceeds the tolerance by 0.681; mw0083d743_836f_4238_a17f_4602193d5bc0 exceeds the tolerance by 19; mwd31f52cc_04e7_40e0_885f_c7b2d9e62215 exceeds the tolerance by 0.394; mw2c9b0499_3325_4394_8af3_bbf653a944a0 exceeds the tolerance by 0.00074; mw6335d5d7_c7b0_4bc0_b883_f7ee4915c2c3 exceeds the tolerance by 0.00245; mwf7796221_1fea_4274_a93e_c00adbf5778c exceeds the tolerance by 39.8; mw5d764bb8_5693_4ac8_9557_f65992cc5eb0 exceeds the tolerance by 0.0955; mwbc2f5464_81e5_43fd_8b39_f5a2756af72f exceeds the tolerance by 3.47
BIOMD0000000535: mwf626e95e_543f_41e4_aad4_c6bf60ab345b exceeds the tolerance by 0.000435; mwbbbce920_e8dd_4320_9386_fc94bfb2fc99 exceeds the tolerance by 0.00908; mw810ff751_fa4e_4143_bd50_169b3e325e1e exceeds the tolerance by 0.0869; mw114aa90f_5f5b_4fe8_9406_361c8489b6a1 exceeds the tolerance by 9.62; mw30ae63db_6cd3_4b6f_93ad_3350cd360bcc exceeds the tolerance by 0.0763; mw03db56ac_8dc6_4931_ae82_fef706d2ee3d exceeds the tolerance by 0.00109; mwf345ed7a_0622_403c_b816_c8749a2c9ded exceeds the tolerance by 682; mw1da111f2_a036_4392_8512_015005bdcbb7 exceeds the tolerance by 1.37; CRP_Suppression___ exceeds the tolerance by 4.44; mw80848184_e2dd_47ce_86d7_7a21479342bd exceeds the tolerance by 0.0491; mwd2d9d93a_3bd1_4f17_bac1_baba9ef2d55a exceeds the tolerance by 5.75e-05; mw4638f126_8cb8_4021_ab41_6ae195743ba0 exceeds the tolerance by 0.000969; mw10315fa3_6f13_4618_bda8_a8694bd3c374 exceeds the tolerance by 0.000167; mw0adf3eb4_a196_4c48_b10d_4e9e9faaf9e1 exceeds the tolerance by 0.000724; mw7d86cc23_a1af_44c3_bdb9_71e9b1bb2a83 exceeds the tolerance by 1.43e-05; mw0eb6c959_d408_45a0_a450_928b8c5876bb exceeds the tolerance by 0.43; mw42054cd7_17af_46da_970c_7f99151906ad exceeds the tolerance by 0.869; mw39c2e431_fdc3_4964_be29_6ca856620b1b exceeds the tolerance by 0.863; mwd5313618_89eb_4c8c_bc82_66f10f966349 exceeds the tolerance by 8; mw2e464cf3_a09c_4b7c_9f3c_06720016a48e exceeds the tolerance by 0.104; mw36ea78c1_ed71_4def_96d3_857a442d7195 exceeds the tolerance by 18.1; mw147d30ec_478e_4090_b496_128a131d29eb exceeds the tolerance by 0.011; mwab41493c_6349_45f1_a226_3030cfed0e06 exceeds the tolerance by 0.116; mwf405687b_7401_44ec_a0d6_4a2b35c13e8a exceeds the tolerance by 0.754; mw3667a5e1_02c9_44a0_acb4_b0431faa822d exceeds the tolerance by 239; mw7becb5fe_8da8_4285_a821_0d77ad811b62 exceeds the tolerance by 0.0013; mw8c9107e6_f51d_442d_b2dc_2bfdbb8482ca exceeds the tolerance by 0.063; mw824bc3d4_1ac3_4912_9b51_8f14ff1c96b9 exceeds the tolerance by 7.42e-05; mw6cce2109_0e32_4dd9_98ec_41173e8ef07d exceeds the tolerance by 0.565; mw2b255f94_8018_4b99_bde8_918eeac45446 exceeds the tolerance by 0.746; mw48867e93_f170_44e8_ac7a_185b23e1bf3b exceeds the tolerance by 0.739; mw0083d743_836f_4238_a17f_4602193d5bc0 exceeds the tolerance by 6.67; mwd31f52cc_04e7_40e0_885f_c7b2d9e62215 exceeds the tolerance by 0.0907; mw2c9b0499_3325_4394_8af3_bbf653a944a0 exceeds the tolerance by 0.00933; mwd65b5b39_dc1b_4e77_a999_67277a880e5e exceeds the tolerance by 0.0308; mw6335d5d7_c7b0_4bc0_b883_f7ee4915c2c3 exceeds the tolerance by 0.136; mwf7796221_1fea_4274_a93e_c00adbf5778c exceeds the tolerance by 118; mw5d764bb8_5693_4ac8_9557_f65992cc5eb0 exceeds the tolerance by 1.8; mwbc2f5464_81e5_43fd_8b39_f5a2756af72f exceeds the tolerance by 10.4
BIOMD0000000537: mwf626e95e_543f_41e4_aad4_c6bf60ab345b exceeds the tolerance by 0.000318; mwbbbce920_e8dd_4320_9386_fc94bfb2fc99 exceeds the tolerance by 0.0091; mw810ff751_fa4e_4143_bd50_169b3e325e1e exceeds the tolerance by 0.0872; mw114aa90f_5f5b_4fe8_9406_361c8489b6a1 exceeds the tolerance by 9.63; mw30ae63db_6cd3_4b6f_93ad_3350cd360bcc exceeds the tolerance by 4.25; mw03db56ac_8dc6_4931_ae82_fef706d2ee3d exceeds the tolerance by 0.00109; mwf345ed7a_0622_403c_b816_c8749a2c9ded exceeds the tolerance by 675; mw1da111f2_a036_4392_8512_015005bdcbb7 exceeds the tolerance by 66; CRP_Suppression___ exceeds the tolerance by 4.45; CRP____of_baseline exceeds the tolerance by 4.36; mw80848184_e2dd_47ce_86d7_7a21479342bd exceeds the tolerance by 0.0493; mwd2d9d93a_3bd1_4f17_bac1_baba9ef2d55a exceeds the tolerance by 5.77e-05; mw4638f126_8cb8_4021_ab41_6ae195743ba0 exceeds the tolerance by 0.000973; mw10315fa3_6f13_4618_bda8_a8694bd3c374 exceeds the tolerance by 0.438; mw0adf3eb4_a196_4c48_b10d_4e9e9faaf9e1 exceeds the tolerance by 0.00221; mw7d86cc23_a1af_44c3_bdb9_71e9b1bb2a83 exceeds the tolerance by 1.44e-05; mw0eb6c959_d408_45a0_a450_928b8c5876bb exceeds the tolerance by 0.43; mw42054cd7_17af_46da_970c_7f99151906ad exceeds the tolerance by 0.871; mw39c2e431_fdc3_4964_be29_6ca856620b1b exceeds the tolerance by 0.864; mwd5313618_89eb_4c8c_bc82_66f10f966349 exceeds the tolerance by 8.01; mw2e464cf3_a09c_4b7c_9f3c_06720016a48e exceeds the tolerance by 6.09; mw36ea78c1_ed71_4def_96d3_857a442d7195 exceeds the tolerance by 18.1; mw147d30ec_478e_4090_b496_128a131d29eb exceeds the tolerance by 0.011; mwab41493c_6349_45f1_a226_3030cfed0e06 exceeds the tolerance by 0.116; mwf405687b_7401_44ec_a0d6_4a2b35c13e8a exceeds the tolerance by 42.7; mw3667a5e1_02c9_44a0_acb4_b0431faa822d exceeds the tolerance by 212; mw772cbf20_3fc1_4800_ae59_77884f1ae333 exceeds the tolerance by 6.61; mw7becb5fe_8da8_4285_a821_0d77ad811b62 exceeds the tolerance by 0.0013; mw8c9107e6_f51d_442d_b2dc_2bfdbb8482ca exceeds the tolerance by 0.0633; mw824bc3d4_1ac3_4912_9b51_8f14ff1c96b9 exceeds the tolerance by 7.45e-05; mw6cce2109_0e32_4dd9_98ec_41173e8ef07d exceeds the tolerance by 0.566; mw2b255f94_8018_4b99_bde8_918eeac45446 exceeds the tolerance by 0.748; mw48867e93_f170_44e8_ac7a_185b23e1bf3b exceeds the tolerance by 0.74; mw0083d743_836f_4238_a17f_4602193d5bc0 exceeds the tolerance by 6.69; mwd31f52cc_04e7_40e0_885f_c7b2d9e62215 exceeds the tolerance by 6.06; mw2c9b0499_3325_4394_8af3_bbf653a944a0 exceeds the tolerance by 0.0115; mwd65b5b39_dc1b_4e77_a999_67277a880e5e exceeds the tolerance by 0.0309; mw6335d5d7_c7b0_4bc0_b883_f7ee4915c2c3 exceeds the tolerance by 0.136; mwf7796221_1fea_4274_a93e_c00adbf5778c exceeds the tolerance by 107; mw5d764bb8_5693_4ac8_9557_f65992cc5eb0 exceeds the tolerance by 21.6; mwbc2f5464_81e5_43fd_8b39_f5a2756af72f exceeds the tolerance by 9.04
BIOMD0000000547: parameter_10 exceeds the tolerance by 0.0827; parameter_13 exceeds the tolerance by 0.0128; parameter_14 exceeds the tolerance by 0.00265; parameter_15 exceeds the tolerance by 0.0681; parameter_16 exceeds the tolerance by 0.00792; parameter_18 exceeds the tolerance by 0.363; parameter_17 exceeds the tolerance by 0.245
BIOMD0000000563: PAMP exceeds the tolerance by 0.652; R exceeds the tolerance by 0.285; R_0 exceeds the tolerance by 0.286; E_int exceeds the tolerance by 0.403; Callose exceeds the tolerance by 0.28; Path exceeds the tolerance by 0.786; Path_bulk exceeds the tolerance by 0.999; PRR exceeds the tolerance by 0.393; PRR_0 exceeds the tolerance by 0.393; E exceeds the tolerance by 0.262
BIOMD0000000570: species_2 exceeds the tolerance by 0.00662; species_3 exceeds the tolerance by 0.00828; species_4 exceeds the tolerance by 0.0213; species_5 exceeds the tolerance by 0.000153; species_6 exceeds the tolerance by 0.000284; species_7 exceeds the tolerance by 0.000449; species_8 exceeds the tolerance by 0.00105; species_9 exceeds the tolerance by 0.000743; species_10 exceeds the tolerance by 0.0272; species_11 exceeds the tolerance by 0.25; species_12 exceeds the tolerance by 0.244; species_13 exceeds the tolerance by 0.0397; species_17 exceeds the tolerance by 0.135; species_18 exceeds the tolerance by 0.0204; species_19 exceeds the tolerance by 0.827; dHb exceeds the tolerance by 0.0353; parameter_10 exceeds the tolerance by 0.00828; parameter_13 exceeds the tolerance by 0.000436; parameter_22 exceeds the tolerance by 0.000284; dAMP_dATP exceeds the tolerance by 0.00792; v_Mito_H3 exceeds the tolerance by 0.000202; parameter_37 exceeds the tolerance by 0.114; F_out exceeds the tolerance by 0.114; rCBF exceeds the tolerance by 9.5; rCMRO2 exceeds the tolerance by 0.0106; rVv exceeds the tolerance by 2.04; O2c_bar exceeds the tolerance by 1.66; ratioO2c_bar exceeds the tolerance by 0.293; compartment_4 exceeds the tolerance by 0.0483; parameter_7 exceeds the tolerance by 0.00662
BIOMD0000000574: ybar_tbp exceeds the tolerance by inf; ybarN_tbp exceeds the tolerance by inf; ybarC_tbp exceeds the tolerance by inf
BIOMD0000000601: mwd805cc43_4a96_472f_a894_c119a6aa895f exceeds the tolerance by 0.00907; mw40a96ef6_32da_46d1_9712_4f53f60bad43 exceeds the tolerance by 0.000126; mwe1a0a651_d2d5_4f75_8d45_9336c60eb9a6 exceeds the tolerance by 2.75e-07; mw168e0d8a_b9f7_4d4c_b437_a81206c5d381 exceeds the tolerance by 0.02; parameter_26 exceeds the tolerance by 0.00907; parameter_23 exceeds the tolerance by 0.988
BIOMD0000000613: PTH exceeds the tolerance by 261; S exceeds the tolerance by 0.0101; B exceeds the tolerance by 13; P exceeds the tolerance by 0.37; T exceeds the tolerance by 0.0096; R exceeds the tolerance by 0.00135; OC exceeds the tolerance by 9.16e-06; L exceeds the tolerance by 0.0021; O exceeds the tolerance by 1.67; Q exceeds the tolerance by 0.708; RX2 exceeds the tolerance by 6.5; CREB exceeds the tolerance by 0.236; BCL2 exceeds the tolerance by 50.3; TERISC exceeds the tolerance by 4.85e+03; A exceeds the tolerance by 1.81; TGFBact exceeds the tolerance by 0.000525; M exceeds the tolerance by 3.75e-08; N exceeds the tolerance by 9.5e-06; Osteoclast exceeds the tolerance by 9.16e-06; OCeqn exceeds the tolerance by 0.000533; MOCratio exceeds the tolerance by 0.000668; MOCratioEff exceeds the tolerance by 0.0017; J14OCdepend exceeds the tolerance by 0.00467; J14 exceeds the tolerance by 0.0014; J41 exceeds the tolerance by 0.000649; koutTGFeqn exceeds the tolerance by 3.17e-05; MeffOC exceeds the tolerance by 0.0231; LsurvOC exceeds the tolerance by 0.00674; KLSoc exceeds the tolerance by 4.23e-05; C4 exceeds the tolerance by 18.6; J15a exceeds the tolerance by 0.00431; J15 exceeds the tolerance by 0.0413; J42 exceeds the tolerance by 0.0191; PTHconc exceeds the tolerance by 18.6; LpthEff exceeds the tolerance by 0.241; kinL exceeds the tolerance by 0.000281; pO exceeds the tolerance by 26.3; RX2Kout exceeds the tolerance by 1.57; crebKin exceeds the tolerance by 0.0337; bcl2Kin exceeds the tolerance by 44.9; CaConc exceeds the tolerance by 0.0264; PhosEff exceeds the tolerance by 5.35e-05; T68 exceeds the tolerance by 0.0914; SE exceeds the tolerance by 0.576; C8 exceeds the tolerance by 0.927; C1 exceeds the tolerance by 0.0264; T36 exceeds the tolerance by 7.45e-05; T37 exceeds the tolerance by 7.47e-05; CaFilt exceeds the tolerance by 0.0476; ReabsPTHeff exceeds the tolerance by 0.0494; CaReabsActive exceeds the tolerance by 0.209; T20 exceeds the tolerance by 0.195; T10 exceeds the tolerance by 0.00462; J27a exceeds the tolerance by 0.195; J27 exceeds the tolerance by 0.15; ScaEff exceeds the tolerance by 0.00992; T72 exceeds the tolerance by 0.893; T73 exceeds the tolerance by 0.0549; T74 exceeds the tolerance by 0.0549; T75 exceeds the tolerance by 0.000455; T76 exceeds the tolerance by 0.000456; J48a exceeds the tolerance by 0.00203; J48 exceeds the tolerance by 0.00203; PicOBkb exceeds the tolerance by 0.000237; PicOBkbEff exceeds the tolerance by 0.00104; RUNX2 exceeds the tolerance by 5.15; RUNX2kbPrimeEff exceeds the tolerance by 1.94e-05; kbprime exceeds the tolerance by 1.95e-05; kbslow exceeds the tolerance by 5.42e-06; Frackb2 exceeds the tolerance by 0.044; T31 exceeds the tolerance by 0.000908; T83 exceeds the tolerance by 0.0027; J40 exceeds the tolerance by 0.00166; T85Rpart exceeds the tolerance by 0.00188; T85 exceeds the tolerance by 0.00171; F11 exceeds the tolerance by 0.00171; INparenCtriol exceeds the tolerance by 1.31e+22; Ctriol50 exceeds the tolerance by 0.705; FCTD exceeds the tolerance by 0.0202; T63 exceeds the tolerance by 36.6; EPTH exceeds the tolerance by 42.4; SPTH exceeds the tolerance by 42.4; TERIPK exceeds the tolerance by 3.44e+03
BIOMD0000000650: l exceeds the tolerance by 0.367; m exceeds the tolerance by 1.05; n exceeds the tolerance by 0.639
BIOMD0000000675: Cdc20 exceeds the tolerance by 0.049; Clb2 exceeds the tolerance by 0.0036; Cdc20_T exceeds the tolerance by 0.000261; Hct1 exceeds the tolerance by 0.0439; Mcm1 exceeds the tolerance by 0.0127; Clb2_Sic1 exceeds the tolerance by 8.33e-06; Sic1 exceeds the tolerance by 0.000168; Swi5 exceeds the tolerance by 0.0178; Sic1_T exceeds the tolerance by 0.000526; Clb5 exceeds the tolerance by 0.00941; Clb5_Sic1 exceeds the tolerance by 0.000369; Clb5_T exceeds the tolerance by 0.00904; Clb2_T exceeds the tolerance by 0.00361; Vi_20 exceeds the tolerance by 9.89; Vi_t1 exceeds the tolerance by 0.00496; Vd_b2 exceeds the tolerance by 0.0898; Vd_b5 exceeds the tolerance by 0.0122; Vd2_c1 exceeds the tolerance by 0.00271; Va_sbf exceeds the tolerance by 0.00368; ORI exceeds the tolerance by 0.0426; BUD exceeds the tolerance by 0.00454; SPN exceeds the tolerance by 0.00192
BIOMD0000000681: K_T exceeds the tolerance by 274; phi_I exceeds the tolerance by 904; phi_R exceeds the tolerance by 382; T exceeds the tolerance by 6.95; total_M exceeds the tolerance by 1.12e+03
BIOMD0000000695: xFinal_1 exceeds the tolerance by 0.907; xFinal_2 exceeds the tolerance by 53.5; xFinal_3 exceeds the tolerance by 37.4; xFinal_4 exceeds the tolerance by 86.5; xFinal_5 exceeds the tolerance by 31.1; xFinal_6 exceeds the tolerance by 27.8; xFinal_7 exceeds the tolerance by 329; xFinal_8 exceeds the tolerance by 8.39e+03; xFinal_9 exceeds the tolerance by 5.27e+03; xFinal_10 exceeds the tolerance by 1.91e+04; xFinal_12 exceeds the tolerance by 1.73e+04
BIOMD0000000706: degr_Foxo1 exceeds the tolerance by 6.27e+11; cytoplasm_Foxo1_Pa0_Ac0_pUb0 exceeds the tolerance by 1.42e+11; nucleus_Foxo1_Pa0_Ac0_pUb0 exceeds the tolerance by 1.12e+13; dnabound_Foxo1_Pa0_Ac0_pUb0 exceeds the tolerance by 9.49e+13; cytoplasm_Foxo1_Pa0_Ac0_pUb1 exceeds the tolerance by 2.87e+09; nucleus_Foxo1_Pa0_Ac0_pUb1 exceeds the tolerance by 3.24e+11; dnabound_Foxo1_Pa0_Ac0_pUb1 exceeds the tolerance by 3.04e+12; cytoplasm_Foxo1_Pa0_Ac1_pUb0 exceeds the tolerance by 6.5e+12; nucleus_Foxo1_Pa0_Ac1_pUb0 exceeds the tolerance by 8.14e+14; dnabound_Foxo1_Pa0_Ac1_pUb0 exceeds the tolerance by 4.1e+15; cytoplasm_Foxo1_Pa0_Ac1_pUb1 exceeds the tolerance by 4.68e+10; nucleus_Foxo1_Pa0_Ac1_pUb1 exceeds the tolerance by 8.95e+12; dnabound_Foxo1_Pa0_Ac1_pUb1 exceeds the tolerance by 4.72e+13; cytoplasm_Foxo1_Pa1_Ac0_pUb0 exceeds the tolerance by 6.65e+11; nucleus_Foxo1_Pa1_Ac0_pUb0 exceeds the tolerance by 8.06e+12; dnabound_Foxo1_Pa1_Ac0_pUb0 exceeds the tolerance by 8.85e+13; cytoplasm_Foxo1_Pa1_Ac0_pUb1 exceeds the tolerance by 2.15e+10; nucleus_Foxo1_Pa1_Ac0_pUb1 exceeds the tolerance by 2.5e+11; dnabound_Foxo1_Pa1_Ac0_pUb1 exceeds the tolerance by 3e+12; cytoplasm_Foxo1_Pa1_Ac1_pUb0 exceeds the tolerance by 4.76e+13; nucleus_Foxo1_Pa1_Ac1_pUb0 exceeds the tolerance by 5.27e+14; dnabound_Foxo1_Pa1_Ac1_pUb0 exceeds the tolerance by 3.52e+15; cytoplasm_Foxo1_Pa1_Ac1_pUb1 exceeds the tolerance by 2.64e+11; nucleus_Foxo1_Pa1_Ac1_pUb1 exceeds the tolerance by 6.1e+12; dnabound_Foxo1_Pa1_Ac1_pUb1 exceeds the tolerance by 4.4e+13; Foxo1_Pa0_tot exceeds the tolerance by 1.08e+14; Foxo1_Pa1_tot exceeds the tolerance by 1.07e+14; Foxo1_Ac0_tot exceeds the tolerance by 4e+11; Foxo1_Ac1_tot exceeds the tolerance by 1.5e+12; Foxo1_pUb0_tot exceeds the tolerance by 2.97e+11; Foxo1_pUb1_tot exceeds the tolerance by 8.34e+11; cytoplasm_Foxo1_tot exceeds the tolerance by 8.92e+13; nucleus_Foxo1_tot exceeds the tolerance by 4.38e+13; dnabound_Foxo1_tot exceeds the tolerance by 4.67e+13; Foxo1_all exceeds the tolerance by 1.13e+12; nucleus_RNA_Inr exceeds the tolerance by 1.04e+15; cytoplasm_RNA_Inr exceeds the tolerance by 1.24e+12; cytoplasm_Inr exceeds the tolerance by 3.9e+13; nucleus_RNA_Sod2 exceeds the tolerance by 1.04e+15; cytoplasm_RNA_Sod2 exceeds the tolerance by 1.24e+12; cytoplasm_Sod2 exceeds the tolerance by 3.9e+13; Akt exceeds the tolerance by 6.05e+15; Foxo1_all_rate exceeds the tolerance by 0.00939
BIOMD0000000718: Elong exceeds the tolerance by 1.23; DNA exceeds the tolerance by 0.231
BIOMD0000000727: DnaA exceeds the tolerance by 0.183; GcrA exceeds the tolerance by 0.737; CtrA exceeds the tolerance by 1.21; CtrA_P exceeds the tolerance by 1.85; DivK exceeds the tolerance by 0.19; DivK_P exceeds the tolerance by 0.107; I exceeds the tolerance by 1.06; CcrM exceeds the tolerance by 0.879; hcori exceeds the tolerance by 0.979; hctrA exceeds the tolerance by 0.999; hccrM exceeds the tolerance by 0.999; hftsZ exceeds the tolerance by 0.999; Ini exceeds the tolerance by 0.00033; DNA exceeds the tolerance by 1.33; Count exceeds the tolerance by 0.999; PodJL exceeds the tolerance by 0.433; PerP exceeds the tolerance by 0.378; DivJ exceeds the tolerance by 1.04; CckA_P exceeds the tolerance by 0.0718; CpdR exceeds the tolerance by 0.0158; RcdA exceeds the tolerance by 0.704; ParAADP exceeds the tolerance by 0.611; FtsZ exceeds the tolerance by 1.2; Zring exceeds the tolerance by 0.949; Elong exceeds the tolerance by 1.33; Z exceeds the tolerance by 0.898; FtsQ exceeds the tolerance by 1.1
BIOMD0000000734: FeRBC exceeds the tolerance by 3.11e-06; NTBI exceeds the tolerance by 2.92e-06; FeBM_0 exceeds the tolerance by 4.31e-06; PSpleen exceeds the tolerance by 0.883; PRBC exceeds the tolerance by 63.6; Total_Fe___in_body exceeds the tolerance by 3.07e+15; FePlasma exceeds the tolerance by 3.07e+15; PLiver exceeds the tolerance by 11.6; PDuo exceeds the tolerance by 0.209; FePlasma_conc_ exceeds the tolerance by 2.92e-06; POutside exceeds the tolerance by 23.9; PRest exceeds the tolerance by 24.2; PPlasma exceeds the tolerance by 99.9; PBM exceeds the tolerance by 22.3
BIOMD0000000736: FeDuo exceeds the tolerance by 0.07; FeRBC exceeds the tolerance by 0.015; FeSpleen exceeds the tolerance by 0.0404; FeLiver exceeds the tolerance by 0.00265; Tf exceeds the tolerance by 1.15e-05; Fe2Tf exceeds the tolerance by 9.78e-06; Fe1Tf exceeds the tolerance by 7.52e-07; FeRest exceeds the tolerance by 8.73e-06; FeBM exceeds the tolerance by 0.00168; Total_Fe__particle exceeds the tolerance by 3.26e+18; Total_Fe__conc exceeds the tolerance by 0.000234; FePlasma__particle exceeds the tolerance by 1.83e+16; Total_Fe__g exceeds the tolerance by 0.000301; FePlasma_conc exceeds the tolerance by 2.23e-05; TfSaturation exceeds the tolerance by 30.1
BIOMD0000000739: Curve_Va exceeds the tolerance by 0.000487; Curve_va_i_506 exceeds the tolerance by 0.00175
BIOMD0000000797: y_CD4_T_Cells exceeds the tolerance by 1.85e-06
BIOMD0000000806: UnInfected_Tumour_Cells_Xu exceeds the tolerance by 3.13e+09; Infected_Tumour_Cells_Xi exceeds the tolerance by 6.39e+03; Virus_Xv exceeds the tolerance by 3.6e+06; Effector_Cytotoxic_CD8_TCells__Xe exceeds the tolerance by 8.56e+03; M1_Macrophage_Xm1 exceeds the tolerance by 1.94e+03; M2_Macrophage_Xm2 exceeds the tolerance by 1.47e+06
BIOMD0000000807: G exceeds the tolerance by 0.000123
BIOMD0000000810: Type_II_T_helper_cells_T_H2 exceeds the tolerance by 23.6; Cytotoxic_T_Cells_T_C exceeds the tolerance by 6.67e+03; Interferon_gamma exceeds the tolerance by 3.28e-05; Cytokine_IL2 exceeds the tolerance by 3.09e-07
BIOMD0000000814: Drug_Concentration_C exceeds the tolerance by 0.598; Tumor_Cell_Population_P exceeds the tolerance by 25.4; Damaged_Tumor_Cells_D exceeds the tolerance by 10.5
BIOMD0000000816: Uninfected_Tumor_Cell_U exceeds the tolerance by 4.49e+15; Infected_Cancer_Cell_I exceeds the tolerance by 1.91e+03; Oncolytic_Adenovirus_V exceeds the tolerance by 2.48e+03; Tumor_targeting_T_cells_T exceeds the tolerance by 8.99e+03; Naive_T_cells_A exceeds the tolerance by 2.73; Dendritic_Cells_D exceeds the tolerance by 1.74; Total_cells_N exceeds the tolerance by 4.49e+15; total_tumor_cells exceeds the tolerance by 4.49e+15
BIOMD0000000817: Uninfected_Tumor_Cell_U exceeds the tolerance by 4.44e+15; Infected_Cancer_Cell_I exceeds the tolerance by 1.1e+05; Oncolytic_Adenovirus_V exceeds the tolerance by 1.38e+05; Tumor_targeting_T_cells_T exceeds the tolerance by 3.54e+05; Dendritic_Cells_D exceeds the tolerance by 1.74; Total_cells_N exceeds the tolerance by 4.44e+15; total_tumor_cells exceeds the tolerance by 4.44e+15
BIOMD0000000818: Myc exceeds the tolerance by 0.365; AKT exceeds the tolerance by 0.587; AKTp exceeds the tolerance by 0.588; PI3K exceeds the tolerance by 0.9; GSK3B exceeds the tolerance by 0.594; GSK3Bp exceeds the tolerance by 0.595; ERK exceeds the tolerance by 0.9; Myc_ser62 exceeds the tolerance by 2.75; Myc_thr58 exceeds the tolerance by 0.11; Myc_total exceeds the tolerance by 2.29
BIOMD0000000820: tumor_at_Exp_Lin_growth exceeds the tolerance by 2.69e+43
BIOMD0000000825: Resistant_tumor_R exceeds the tolerance by 0.999; Sensitive_tumor_S exceeds the tolerance by 1; Tumor_Volume_V exceeds the tolerance by 0.987
BIOMD0000000828: Glucose_G exceeds the tolerance by 1.56; Drug_D exceeds the tolerance by 0.744; miR_451_M exceeds the tolerance by 3.23; AMPK_A exceeds the tolerance by 3.6; mTOR_R exceeds the tolerance by 2.96; deltaD exceeds the tolerance by 0.525
BIOMD0000000829: Glucose_G exceeds the tolerance by 1.98; Drug_D exceeds the tolerance by 0.759; miR_451_M exceeds the tolerance by 1.42; AMPK_A exceeds the tolerance by 2.4; mTOR_R exceeds the tolerance by 0.398; deltaD exceeds the tolerance by 1.14; Cdh1 exceeds the tolerance by 0.948; CycB exceeds the tolerance by 0.0708; p55cdc_T exceeds the tolerance by 0.956; mass_s exceeds the tolerance by 0.625; p55cdc_A exceeds the tolerance by 0.88; Plk1 exceeds the tolerance by 0.104
BIOMD0000000876: C_Uninfected_CD4 exceeds the tolerance by 6.7; I_Infected_CD4 exceeds the tolerance by 1.3; F_CTL exceeds the tolerance by 0.27; V_Virus exceeds the tolerance by 106
BIOMD0000000879: N exceeds the tolerance by 1.63e+10; I exceeds the tolerance by 5.64e+07; Q exceeds the tolerance by 22.1
BIOMD0000000884: U exceeds the tolerance by 6.24e-06
BIOMD0000000901: Fat_Mass exceeds the tolerance by 9.96; Body_Mass exceeds the tolerance by 9.91; alpha exceeds the tolerance by 4.98; p___Ratio exceeds the tolerance by 0.011; Energy_Expenditure_Rate exceeds the tolerance by 0.49; Psy exceeds the tolerance by 0.0136
BIOMD0000000903: H exceeds the tolerance by 4.11e-05
BIOMD0000000918: E2F exceeds the tolerance by 17.6; CycD exceeds the tolerance by 0.24; CycE exceeds the tolerance by 0.00449; Rb exceeds the tolerance by 0.00326; Phosphorylated_Rb exceeds the tolerance by 72.6; Rb_E2F_complex exceeds the tolerance by 127; serum exceeds the tolerance by 2
BIOMD0000000924: Susceptible_epithelial_cells__EU exceeds the tolerance by 5.39e-05
BIOMD0000000928: solution0 exceeds the tolerance by 0.266; solution1 exceeds the tolerance by 2.41; solution2 exceeds the tolerance by 0.682; solution3 exceeds the tolerance by 0.499
BIOMD0000000955: Susceptible exceeds the tolerance by 0.866; Infected exceeds the tolerance by 0.162; Diagnosed exceeds the tolerance by 0.131; Ailing exceeds the tolerance by 0.0463; Recognized exceeds the tolerance by 0.341; Threatened exceeds the tolerance by 0.179; Healed exceeds the tolerance by 0.568; Extinct exceeds the tolerance by 0.0846
BIOMD0000000960: Susceptible exceeds the tolerance by 4.03e+06; Exposed exceeds the tolerance by 4e+05; Infectious exceeds the tolerance by 1.2e+04; Asymptomatic exceeds the tolerance by 1.01e+05; Hospitalized exceeds the tolerance by 3.34e+04; Recovered exceeds the tolerance by 4.03e+06; Deceased exceeds the tolerance by 8.35e+03; Cumulative_Cases exceeds the tolerance by 2.14e+05; l_1 exceeds the tolerance by 0.538; beta_1 exceeds the tolerance by 0.194
BIOMD0000000969: Susceptible_Counties_with_airports exceeds the tolerance by 1.76e+06; Infected_Counties_with_airports exceeds the tolerance by 1.93e+05; Hospitalised_Counties_with_airports exceeds the tolerance by 7.45e+04; ICU_Counties_with_airports exceeds the tolerance by 1.04e+04; Deceased_Counties_with_airports exceeds the tolerance by 1.09e+05; Recovered_Counties_with_airports exceeds the tolerance by 1.31e+06; Discharged_Counties_with_airports exceeds the tolerance by 1.53e+05; Susceptible_Counties_neighbouring_counties_with_airports exceeds the tolerance by 1.31e+06; Infected_Counties_neighbouring_counties_with_airports exceeds the tolerance by 1.43e+05; Hospitalised_Counties_neighbouring_counties_with_airports exceeds the tolerance by 7.1e+04; ICU_Counties_neighbouring_counties_with_airports exceeds the tolerance by 1.78e+04; Deceased_Counties_neighbouring_counties_with_airports exceeds the tolerance by 9.59e+04; Recovered_Counties_neighbouring_counties_with_airports exceeds the tolerance by 8.92e+05; Discharged_Counties_neighbouring_counties_with_airports exceeds the tolerance by 1.27e+05; Susceptible_Counties_with_highways exceeds the tolerance by 2.92e+05; Infected_Counties_with_highways exceeds the tolerance by 3.5e+04; Hospitalised_Counties_with_highways exceeds the tolerance by 2.01e+04; ICU_Counties_with_highways exceeds the tolerance by 5.58e+03; Deceased_Counties_with_highways exceeds the tolerance by 1.25e+04; Recovered_Counties_with_highways exceeds the tolerance by 1.93e+05; Discharged_Counties_with_highways exceeds the tolerance by 2.91e+04; Susceptible_Low_risk_counties exceeds the tolerance by 5.47e+04; Infected_Low_risk_counties exceeds the tolerance by 5.68e+03; Hospitalised_Low_risk_counties exceeds the tolerance by 5.24e+03; ICU_Low_risk_counties exceeds the tolerance by 1.11e+03; Deceased_Low_risk_counties exceeds the tolerance by 5.87e+03; Recovered_Low_risk_counties exceeds the tolerance by 3.06e+04; Discharged_Low_risk_counties exceeds the tolerance by 7.71e+03; Cumulative_cases_Counties_with_airports exceeds the tolerance by 1.69e+06; Cumulative_cases_Low_risk_counties exceeds the tolerance by 4.96e+04; Cumulative_cases_Counties_neighbouring_counties_with_airports exceeds the tolerance by 1.23e+06; Total_hospitalisations exceeds the tolerance by 5.4e+05; Cumulative_cases_Counties_with_highways exceeds the tolerance by 2.68e+05; Total_cumulative_cases exceeds the tolerance by 3.24e+06; Total_deaths exceeds the tolerance by 2.23e+05
BIOMD0000000976: Susceptible exceeds the tolerance by 1.27e+07; Infected_strong_immune_system exceeds the tolerance by 2.47e+06; Infected_weak_immune_system exceeds the tolerance by 2.32e+06; Recovered exceeds the tolerance by 7.16e+06
BIOMD0000000978: Susceptible exceeds the tolerance by 3.53e+07; Exposed exceeds the tolerance by 7.92e+06; Infected exceeds the tolerance by 6.49e+06; Recovered exceeds the tolerance by 3.53e+07; Cumulative_cases exceeds the tolerance by 3.53e+07
BIOMD0000000983: S_c exceeds the tolerance by 6.17e+07; S_u exceeds the tolerance by 5.18e+07; E exceeds the tolerance by 1.49e+07; I_r exceeds the tolerance by 5.13e+06; I_u exceeds the tolerance by 8.43e+06; R exceeds the tolerance by 6.25e+07; Q exceeds the tolerance by 6.94e+06; m_t exceeds the tolerance by 0.929
BIOMD0000000986: Pyranine_single_compartment_model exceeds the tolerance by 54.9; Pyranine_three_compartment_model_compartment_1 exceeds the tolerance by 44.3; Pyranine_three_compartment_model_compartment_2 exceeds the tolerance by 7.68; Pyranine_three_compartment_model_compartment_3 exceeds the tolerance by 0.922; Total_Pyranine exceeds the tolerance by 52.9
BIOMD0000001006: DNA_damage exceeds the tolerance by 1.43; IR exceeds the tolerance by 0.999; p53_total exceeds the tolerance by 0.0872; p53_ub exceeds the tolerance by 0.0198; p53_ub_ub exceeds the tolerance by 0.000415; Mdm2_cyt exceeds the tolerance by 0.00811; Mdm2_p_cyt exceeds the tolerance by 0.00571; Mdm2_p_nuc exceeds the tolerance by 0.159; p53 exceeds the tolerance by 0.0678; MDM2_total exceeds the tolerance by 0.00797; kd2_0 exceeds the tolerance by 0.00876
BIOMD0000001019: Cm exceeds the tolerance by 2.59e+06; Ct exceeds the tolerance by 2e+06; T exceeds the tolerance by 5.68e+08
BIOMD0000001020: Cm exceeds the tolerance by 711; Ct exceeds the tolerance by 1.27e+07; T exceeds the tolerance by 2.69e+28
BIOMD0000001027: mLiver exceeds the tolerance by 324; mKidneyPlasma exceeds the tolerance by 2.93; mRemainder exceeds the tolerance by 211; mPlasmaVenous exceeds the tolerance by 27.7; mHeart exceeds the tolerance by 9.21; mMuscle exceeds the tolerance by 1.11e+03; mAdipose exceeds the tolerance by 35.9; mBrain exceeds the tolerance by 9.71; mFeces exceeds the tolerance by 3.85e+03; mUrine exceeds the tolerance by 6.78e+03; mIntestineLumen exceeds the tolerance by 4.9e+03; mPlasmaArterial exceeds the tolerance by 9.22; mLung exceeds the tolerance by 16.2; mPortalVein exceeds the tolerance by 6.38; mStomach exceeds the tolerance by 14.1; mIntestineEnterocytes exceeds the tolerance by 999; mKidneyTissue exceeds the tolerance by 23; mIntestineVascular exceeds the tolerance by 138; mStomachLumen exceeds the tolerance by 3.95; mKidneyTubular exceeds the tolerance by 161; mgIntestineLumen exceeds the tolerance by 0.634; mgBrain exceeds the tolerance by 0.00125; mgAdipose exceeds the tolerance by 0.00464; mgRemainder exceeds the tolerance by 0.0272; mgPortalVein exceeds the tolerance by 0.000824; mgUrine exceeds the tolerance by 0.876; mgFeces exceeds the tolerance by 0.497; mgIntestineEnterocytes exceeds the tolerance by 0.129; mgPlasmaArterial exceeds the tolerance by 0.00119; mgLung exceeds the tolerance by 0.00209; mgKidneyPlasma exceeds the tolerance by 0.000377; mIntestineSum exceeds the tolerance by 1.63e+03; mKidneySum exceeds the tolerance by 405; mgKidneyTissues exceeds the tolerance by 0.00297; mgIntestineVascular exceeds the tolerance by 0.0178; mgStomachLumen exceeds the tolerance by 0.00051; mArterialPlasma__for_kidney exceeds the tolerance by 26.8; mgKidneyTubular exceeds the tolerance by 0.0208; mgKidneyTotal exceeds the tolerance by 0.0242; mgIntestineTotal exceeds the tolerance by 0.147; mgLiver exceeds the tolerance by 0.0419; mgPlasmaVenous exceeds the tolerance by 0.00357; mgHeart exceeds the tolerance by 0.00119; mgMuscle exceeds the tolerance by 0.143; mgStomach exceeds the tolerance by 0.00182
BIOMD0000001028: mLiver exceeds the tolerance by 1.2e+05; mKidneyPlasma exceeds the tolerance by 940; mRemainder exceeds the tolerance by 7.8e+04; mPlasmaVenous exceeds the tolerance by 1.36e+04; mHeart exceeds the tolerance by 5.3e+03; mMuscle exceeds the tolerance by 5.05e+05; mAdipose exceeds the tolerance by 6.1e+04; mBrain exceeds the tolerance by 6.79e+03; mFeces exceeds the tolerance by 1.49e+06; mUrineExternal exceeds the tolerance by 1.53e+06; mIntestineLumen exceeds the tolerance by 4.92e+05; mPlasmaArterial exceeds the tolerance by 4.54e+03; mLung exceeds the tolerance by 9.67e+03; mPortalVein exceeds the tolerance by 2.91e+03; mStomach exceeds the tolerance by 2.84e+03; mEnterocytes exceeds the tolerance by 3.75e+05; mKidneyTissue exceeds the tolerance by 5.62e+03; mIntestineVascular exceeds the tolerance by 6.4e+04; mStomachLumen exceeds the tolerance by 1.11e+06; mRBC exceeds the tolerance by 2.23e+03; mKidneyTubular exceeds the tolerance by 2.51e+05; mgIntestineLumen exceeds the tolerance by 63.5; mgStomachLumen exceeds the tolerance by 143; mgLiver exceeds the tolerance by 15.5; mgVenousPlasma exceeds the tolerance by 1.76; mgBrain exceeds the tolerance by 0.876; mgHeart exceeds the tolerance by 0.684; mgKidneyPlasma exceeds the tolerance by 0.121; mgRemainder exceeds the tolerance by 10.1; mArterialPlasma__kidney exceeds the tolerance by 6.06; mgAdipose exceeds the tolerance by 7.88; mgArterialPlasma exceeds the tolerance by 0.586; mgLung exceeds the tolerance by 1.25; mgStomach exceeds the tolerance by 0.366; mgEnterocytes exceeds the tolerance by 48.5; mgKidneyTissues exceeds the tolerance by 0.726; mIntestineTotal exceeds the tolerance by 615; mgIntestineVascular exceeds the tolerance by 8.26; mgRBC exceeds the tolerance by 0.288; mKidneyTotal exceeds the tolerance by 833; mgKidneyTubular exceeds the tolerance by 32.4; mgMuscle exceeds the tolerance by 65.2; mgPortalVein exceeds the tolerance by 0.375; mgUrineSum exceeds the tolerance by 197; mgFeces exceeds the tolerance by 192; mgKidneyTotal exceeds the tolerance by 33; mgIntestineTotal exceeds the tolerance by 56.8
BIOMD0000001029: mLiver exceeds the tolerance by 1.29e+05; mKidneyPlasma exceeds the tolerance by 1.07e+03; mRemainder exceeds the tolerance by 8.89e+04; mPlasmaVenous exceeds the tolerance by 1.54e+04; mHeart exceeds the tolerance by 6.02e+03; mMuscle exceeds the tolerance by 6.03e+05; mAdipose exceeds the tolerance by 6.95e+04; mBrain exceeds the tolerance by 7.7e+03; mFeces exceeds the tolerance by 5.95e+06; mUrineExternal exceeds the tolerance by 6.11e+06; mIntestineLumen exceeds the tolerance by 4.92e+05; mPlasmaArterial exceeds the tolerance by 5.14e+03; mLung exceeds the tolerance by 1.1e+04; mPortalVein exceeds the tolerance by 3.09e+03; mStomach exceeds the tolerance by 3.23e+03; mEnterocytes exceeds the tolerance by 3.76e+05; mKidneyTissue exceeds the tolerance by 6.58e+03; mIntestineVascular exceeds the tolerance by 6.67e+04; mStomachLumen exceeds the tolerance by 1.11e+06; mRBC exceeds the tolerance by 5.95e+03; mKidneyTubular exceeds the tolerance by 2.92e+05; mgStomach exceeds the tolerance by 0.417; mgPortalVein exceeds the tolerance by 0.399; mgUrineSum exceeds the tolerance by 789; mgLiver exceeds the tolerance by 16.6; mgIntestineLumen exceeds the tolerance by 63.6; mgBrain exceeds the tolerance by 0.994; mgLung exceeds the tolerance by 1.42; mgKidneyPlasma exceeds the tolerance by 0.138; mgRemainder exceeds the tolerance by 11.5; mgMuscle exceeds the tolerance by 77.9; mIntestineTotal exceeds the tolerance by 620; mKidneyTotal exceeds the tolerance by 969; mgKidneyTissues exceeds the tolerance by 0.85; mgIntestineVascular exceeds the tolerance by 8.62; mgStomachLumen exceeds the tolerance by 143; mArterialPlasma__kidney exceeds the tolerance by 6.87; mgKidneyTubular exceeds the tolerance by 37.7; mgKidneyTotal exceeds the tolerance by 38.4; mgRBC exceeds the tolerance by 0.768; mgAdipose exceeds the tolerance by 8.97; mgHeart exceeds the tolerance by 0.777; mgFeces exceeds the tolerance by 769; mgEnterocytes exceeds the tolerance by 48.6; mgIntestineTotal exceeds the tolerance by 57.2; mgVenousPlasma exceeds the tolerance by 1.99; mgArterialPlasma exceeds the tolerance by 0.664
BIOMD0000001032: uninfected_cancer_cells exceeds the tolerance by 0.0171; infected_cancer_cells exceeds the tolerance by 0.000117; free_virus exceeds the tolerance by 0.000435; damaged_cancer_cells exceeds the tolerance by 0.00462
BIOMD0000001033: Uninfected_tumour_cells exceeds the tolerance by 2.06e-06; Uninfected_M2_macrophages exceeds the tolerance by 2.36e-06; Infected_M2_macrophages exceeds the tolerance by 8.45e-07; Oncolytic_viruses exceeds the tolerance by 2.01e-06
BIOMD0000001043: uninfected_tumor_cells exceeds the tolerance by 2.81e-05; virus_specific_CTLs exceeds the tolerance by 0.000998; overall_tumor_size exceeds the tolerance by 2.6e-05
BIOMD0000001098: M_methf_c_ exceeds the tolerance by 1; M_xan_c_ exceeds the tolerance by 1; M_quln_c_ exceeds the tolerance by 1; M_o2_c_ exceeds the tolerance by 1; M_ac_e_ exceeds the tolerance by 1; M_tih2cit_c_ exceeds the tolerance by 1; M_citr_L_c_ exceeds the tolerance by 1; M_ppi_c_ exceeds the tolerance by 1; M_3psme_c_ exceeds the tolerance by 1; M_13dpg_c_ exceeds the tolerance by 1; M_alac_S_c_ exceeds the tolerance by 1; M_26dap_M_c_ exceeds the tolerance by 1; M_iletrna_c_ exceeds the tolerance by 1; M_4kfbp_c_ exceeds the tolerance by 1; M_indaccoa_c_ exceeds the tolerance by 1; M_cbl1_c_ exceeds the tolerance by 1; M_copre5_c_ exceeds the tolerance by 1; M_6ax6ax_c_ exceeds the tolerance by 1; M_hacon_T_c_ exceeds the tolerance by 1; M_glyald_c_ exceeds the tolerance by 1; M_36dahx_c_ exceeds the tolerance by 1; M_so4_e_ exceeds the tolerance by 1; M_r15bp_c_ exceeds the tolerance by 1; M_glc_D_c_ exceeds the tolerance by 1; M_gdpfuc_c_ exceeds the tolerance by 1; M_adn_c_ exceeds the tolerance by 1; M_trnaala_c_ exceeds the tolerance by 1; M_trnathr_c_ exceeds the tolerance by 1; M_glyclt_c_ exceeds the tolerance by 1; M_3hdpgpg_c_ exceeds the tolerance by 1; M_4r5au_c_ exceeds the tolerance by 1; M_acglu_c_ exceeds the tolerance by 1; M_formmfr_b__c_ exceeds the tolerance by 1; M_dhadr_c_ exceeds the tolerance by 1; M_co1dam_c_ exceeds the tolerance by 1; M_cdgggp_c_ exceeds the tolerance by 1; M_his_L_c_ exceeds the tolerance by 1; M_caphis_c_ exceeds the tolerance by 1; M_5aop_c_ exceeds the tolerance by 1; M_co2_e_ exceeds the tolerance by 1; M_34hpp_c_ exceeds the tolerance by 1; M_psd5p_c_ exceeds the tolerance by 1; M_aicar_c_ exceeds the tolerance by 1; M_nmn_c_ exceeds the tolerance by 1; M_indpyr_c_ exceeds the tolerance by 1; M_paps_c_ exceeds the tolerance by 1; M_imp_c_ exceeds the tolerance by 1; M_gdpgpi_c_ exceeds the tolerance by 1; M_f390g_c_ exceeds the tolerance by 1; M_3hdggpg_c_ exceeds the tolerance by 1; M_alac_S_e_ exceeds the tolerance by 1; M_g1p_c_ exceeds the tolerance by 1; M_unknown_cbl1deg_c_ exceeds the tolerance by 1; M_imacp_c_ exceeds the tolerance by 1; M_dump_c_ exceeds the tolerance by 1; M_e4p_c_ exceeds the tolerance by 1; M_asp_L_c_ exceeds the tolerance by 1; M_agdpcbi_c_ exceeds the tolerance by 1; M_cbl1_e_ exceeds the tolerance by 1; M_ppp9_c_ exceeds the tolerance by 1; M_4mop_c_ exceeds the tolerance by 1; M_trnaarg_c_ exceeds the tolerance by 1; M_glyald_e_ exceeds the tolerance by 1; M_pac_c_ exceeds the tolerance by 1; M_mma_c_ exceeds the tolerance by 1; M_dhap_c_ exceeds the tolerance by 1; M_ddhrb_c_ exceeds the tolerance by 1; M_h_c_ exceeds the tolerance by 1; M_trptrna_c_ exceeds the tolerance by 1; M_thrp_c_ exceeds the tolerance by 1; M_dggpgp_c_ exceeds the tolerance by 1; M_acg5sa_c_ exceeds the tolerance by 1; M_gdpddman_c_ exceeds the tolerance by 1; M_glu_L_c_ exceeds the tolerance by 1; M_dkfp_c_ exceeds the tolerance by 1; M_prbatp_c_ exceeds the tolerance by 1; M_dhadrdpr_c_ exceeds the tolerance by 1; M_mphenh2_c_ exceeds the tolerance by 1; M_atrz_c_ exceeds the tolerance by 1; M_glyc_c_ exceeds the tolerance by 1; M_2ins_c_ exceeds the tolerance by 1; M_f420_5_c_ exceeds the tolerance by 1; M_gmp_c_ exceeds the tolerance by 1; M_glutrna_gln__c_ exceeds the tolerance by 1; M_3dhq_c_ exceeds the tolerance by 1; M_orn_c_ exceeds the tolerance by 1; M_frdp_c_ exceeds the tolerance by 1; M_carn_c_ exceeds the tolerance by 1; M_sf430a_c_ exceeds the tolerance by 1; M_glntrna_c_ exceeds the tolerance by 1; M_trnaasp_c_ exceeds the tolerance by 1; M_thm_c_ exceeds the tolerance by 1; M_valtrna_c_ exceeds the tolerance by 1; M_asn_L_c_ exceeds the tolerance by 1; M_ppcoa_c_ exceeds the tolerance by 1; M_glu5sa_c_ exceeds the tolerance by 1; M_S2hglut_c_ exceeds the tolerance by 1; M_unknown_cbl1deg_e_ exceeds the tolerance by 1; M_pmcoa_c_ exceeds the tolerance by 1; M_hco3_c_ exceeds the tolerance by 1; M_dtdp4d6dg_c_ exceeds the tolerance by 1; M_nac_c_ exceeds the tolerance by 1; M_dhadrpr_c_ exceeds the tolerance by 1; M_arg_L_c_ exceeds the tolerance by 1; M_trnamet_c_ exceeds the tolerance by 1; M_fprica_c_ exceeds the tolerance by 1; M_ch4_c_ exceeds the tolerance by 1; M_xu5p_D_c_ exceeds the tolerance by 1; M_alatrna_c_ exceeds the tolerance by 1; M_pac_e_ exceeds the tolerance by 1; M_f420_0_c_ exceeds the tolerance by 1; M_mma_e_ exceeds the tolerance by 1; M_ipdp_c_ exceeds the tolerance by 1; M_rb15bp_c_ exceeds the tolerance by 1; M_hcys_L_c_ exceeds the tolerance by 1; M_h_e_ exceeds the tolerance by 1; M_hspmd_c_ exceeds the tolerance by 1; M_mphen_c_ exceeds the tolerance by 1; M_h2acon_C_c_ exceeds the tolerance by 1; M_glu_L_e_ exceeds the tolerance by 1; M_cob_c_ exceeds the tolerance by 1; M_4abz_c_ exceeds the tolerance by 1; M_gam1p_c_ exceeds the tolerance by 1; M_glyc_e_ exceeds the tolerance by 1; M_hom_L_c_ exceeds the tolerance by 1; M_histd_c_ exceeds the tolerance by 1; M_pro_L_c_ exceeds the tolerance by 1; M_adcobhex_c_ exceeds the tolerance by 1; M_dscl_c_ exceeds the tolerance by 1; M_f6p_c_ exceeds the tolerance by 1; M_xmp_c_ exceeds the tolerance by 1; M_fru_c_ exceeds the tolerance by 1; M_trp_L_c_ exceeds the tolerance by 1; M_2pg_c_ exceeds the tolerance by 1; M_mg2_c_ exceeds the tolerance by 1; M_lys_L_c_ exceeds the tolerance by 1; M_thm_e_ exceeds the tolerance by 1; M_lald_L_c_ exceeds the tolerance by 1; M_dhf_c_ exceeds the tolerance by 1; M_5odhf2a_c_ exceeds the tolerance by 1; M_dpgps_c_ exceeds the tolerance by 1; M_dcamp_c_ exceeds the tolerance by 1; M_3hggdp_c_ exceeds the tolerance by 1; M_ahcys_c_ exceeds the tolerance by 1; M_56dthm_c_ exceeds the tolerance by 1; M_s_c_ exceeds the tolerance by 1; M_no2_c_ exceeds the tolerance by 1; M_nac_e_ exceeds the tolerance by 1; M_ohepa_c_ exceeds the tolerance by 1; M_copre6_c_ exceeds the tolerance by 1; M_idp_c_ exceeds the tolerance by 1; M_ch4_e_ exceeds the tolerance by 1; M_dudp_c_ exceeds the tolerance by 1; M_cmp_c_ exceeds the tolerance by 1; M_5dpmev_c_ exceeds the tolerance by 1; M_pram_c_ exceeds the tolerance by 1; M_inost_c_ exceeds the tolerance by 1; M_dmpp_c_ exceeds the tolerance by 1; M_oaa_c_ exceeds the tolerance by 1; M_glcn_c_ exceeds the tolerance by 1; M_fe2_c_ exceeds the tolerance by 1; M_lppg_c_ exceeds the tolerance by 1; M_glu1sa_c_ exceeds the tolerance by 1; M_dha_c_ exceeds the tolerance by 1; M_gcald_c_ exceeds the tolerance by 1; M_uamr_c_ exceeds the tolerance by 1; M_4abz_e_ exceeds the tolerance by 1; M_amob_c_ exceeds the tolerance by 1; M_ihcit_T_c_ exceeds the tolerance by 1; M_cys_L_c_ exceeds the tolerance by 1; M_pro_L_e_ exceeds the tolerance by 1; M_argtrna_c_ exceeds the tolerance by 1; M_2c25dho_c_ exceeds the tolerance by 1; M_mg2_e_ exceeds the tolerance by 1; M_lys_L_e_ exceeds the tolerance by 1; M_hsfd_c_ exceeds the tolerance by 1; M_adocbi_c_ exceeds the tolerance by 1; M_chor_c_ exceeds the tolerance by 1; M_fmn_c_ exceeds the tolerance by 1; M_dgggps_c_ exceeds the tolerance by 1; M_gdp_c_ exceeds the tolerance by 1; M_2dhp_c_ exceeds the tolerance by 1; M_accoa_c_ exceeds the tolerance by 1; M_dms_c_ exceeds the tolerance by 1; M_amp_c_ exceeds the tolerance by 1; M_pppi_c_ exceeds the tolerance by 1; M_25aics_c_ exceeds the tolerance by 1; M_s_e_ exceeds the tolerance by 1; M_fpram_c_ exceeds the tolerance by 1; M_dxyl5p_c_ exceeds the tolerance by 1; M_dhor_S_c_ exceeds the tolerance by 1; M_ile_L_c_ exceeds the tolerance by 1; M_rib_D_c_ exceeds the tolerance by 1; M_4abut_c_ exceeds the tolerance by 1; M_com_c_ exceeds the tolerance by 1; M_f430p1_c_ exceeds the tolerance by 1; M_dpgpi_c_ exceeds the tolerance by 1; M_met_L_c_ exceeds the tolerance by 1; M_2saa_c_ exceeds the tolerance by 1; M_itp_c_ exceeds the tolerance by 1; M_prlp_c_ exceeds the tolerance by 1; M_cl_c_ exceeds the tolerance by 1; M_dtdp4d6dm_c_ exceeds the tolerance by 1; M_thmpp_c_ exceeds the tolerance by 1; M_fald_c_ exceeds the tolerance by 1; M_dutp_c_ exceeds the tolerance by 1; M_glcn_e_ exceeds the tolerance by 1; M_fe2_e_ exceeds the tolerance by 1; M_ni2_c_ exceeds the tolerance by 1; M_gcald_e_ exceeds the tolerance by 1; M_glutrna_c_ exceeds the tolerance by 1; M_ade_c_ exceeds the tolerance by 1; M_f420_6_c_ exceeds the tolerance by 1; M_3c4mop_c_ exceeds the tolerance by 1; M_cys_L_e_ exceeds the tolerance by 1; M_mppp9_c_ exceeds the tolerance by 1; M_succoa_c_ exceeds the tolerance by 1; M_dggpi_c_ exceeds the tolerance by 1; M_ala_L_c_ exceeds the tolerance by 1; M_aspsa_c_ exceeds the tolerance by 1; M_duri_c_ exceeds the tolerance by 1; M_Rh3cit_c_ exceeds the tolerance by 1; M_slp_L_c_ exceeds the tolerance by 1; M_dkmp_c_ exceeds the tolerance by 1; M_asptrna_c_ exceeds the tolerance by 1; M_3hdpgps_c_ exceeds the tolerance by 1; M_dms_e_ exceeds the tolerance by 1; M_nad_c_ exceeds the tolerance by 1; M_4hphac_c_ exceeds the tolerance by 1; M_25dhpp_c_ exceeds the tolerance by 1; M_thmmp_c_ exceeds the tolerance by 1; M_gtp_c_ exceeds the tolerance by 1; M_2ahbut_c_ exceeds the tolerance by 1; M_icit_c_ exceeds the tolerance by 1; M_ile_L_e_ exceeds the tolerance by 1; M_ru5p_D_c_ exceeds the tolerance by 1; M_orot_c_ exceeds the tolerance by 1; M_f420_1_c_ exceeds the tolerance by 1; M_4pasp_c_ exceeds the tolerance by 1; M_5caiz_c_ exceeds the tolerance by 1; M_nadp_c_ exceeds the tolerance by 1; M_cl_e_ exceeds the tolerance by 1; M_10fthf_c_ exceeds the tolerance by 1; M_succ_c_ exceeds the tolerance by 1; M_lystrna_c_ exceeds the tolerance by 1; M_3ig3p_c_ exceeds the tolerance by 1; M_o2__c_ exceeds the tolerance by 1; M_cdp_c_ exceeds the tolerance by 1; M_mfr_b__c_ exceeds the tolerance by 1; M_nh4_c_ exceeds the tolerance by 1; M_etoh_c_ exceeds the tolerance by 1; M_ni2_e_ exceeds the tolerance by 1; M_uppg3_c_ exceeds the tolerance by 1; M_trnagln_c_ exceeds the tolerance by 1; M_fgam_c_ exceeds the tolerance by 1; M_4ppan_c_ exceeds the tolerance by 1; M_acmana_c_ exceeds the tolerance by 1; M_ala_L_e_ exceeds the tolerance by 1; M_air_c_ exceeds the tolerance by 1; M_mev_R_c_ exceeds the tolerance by 1; M_prfp_c_ exceeds the tolerance by 1; M_phetrna_c_ exceeds the tolerance by 1; M_cbi_c_ exceeds the tolerance by 1; M_fmettrna_c_ exceeds the tolerance by 1; M_formh4spt_c_ exceeds the tolerance by 1; M_ala_B_c_ exceeds the tolerance by 1; M_acorn_c_ exceeds the tolerance by 1; M_4hphac_e_ exceeds the tolerance by 1; M_mobd_c_ exceeds the tolerance by 1; M_dhnpt_c_ exceeds the tolerance by 1; M_2ood_c_ exceeds the tolerance by 1; M_gdpofuc_c_ exceeds the tolerance by 1; M_ribflv_c_ exceeds the tolerance by 1; M_adp_c_ exceeds the tolerance by 1; M_mn2_c_ exceeds the tolerance by 1; M_mh4spt_c_ exceeds the tolerance by 1; M_tma_c_ exceeds the tolerance by 1; M_pran_c_ exceeds the tolerance by 1; M_3mop_c_ exceeds the tolerance by 1; M_3hdpgpi_c_ exceeds the tolerance by 1; M_agdpgpi_c_ exceeds the tolerance by 1; M_3hgrdp_c_ exceeds the tolerance by 1; M_phpyr_c_ exceeds the tolerance by 1; M_fe3_c_ exceeds the tolerance by 1; M_mi1p_D_c_ exceeds the tolerance by 1; M_hmgcoa_c_ exceeds the tolerance by 1; M_trnatyr_c_ exceeds the tolerance by 1; M_nh4_e_ exceeds the tolerance by 1; M_dtdpglu_c_ exceeds the tolerance by 1; M_h2s_c_ exceeds the tolerance by 1; M_ctp_c_ exceeds the tolerance by 1; M_copre2_c_ exceeds the tolerance by 1; M_menylh4spt_c_ exceeds the tolerance by 1; M_leutrna_c_ exceeds the tolerance by 1; M_5oxpro_c_ exceeds the tolerance by 1; M_3hdggpi_c_ exceeds the tolerance by 1; M_achms_c_ exceeds the tolerance by 1; M_anth_c_ exceeds the tolerance by 1; M_cbi_e_ exceeds the tolerance by 1; M_4mhetz_c_ exceeds the tolerance by 1; M_f420_2h2_c_ exceeds the tolerance by 1; M_5mta_c_ exceeds the tolerance by 1; M_5hbzid_c_ exceeds the tolerance by 1; M_glycogen_c_ exceeds the tolerance by 1; M_ppa_c_ exceeds the tolerance by 1; M_mobd_e_ exceeds the tolerance by 1; M_f430p2_c_ exceeds the tolerance by 1; M_2plac_L_c_ exceeds the tolerance by 1; M_trnagly_c_ exceeds the tolerance by 1; M_ura_c_ exceeds the tolerance by 1; M_hgbam_c_ exceeds the tolerance by 1; M_ribflv_e_ exceeds the tolerance by 1; M_adocblhbi_c_ exceeds the tolerance by 1; M_mn2_e_ exceeds the tolerance by 1; M_tma_e_ exceeds the tolerance by 1; M_ppbng_c_ exceeds the tolerance by 1; M_nicrnt_c_ exceeds the tolerance by 1; M_atp_c_ exceeds the tolerance by 1; M_fe3_e_ exceeds the tolerance by 1; M_cd2_c_ exceeds the tolerance by 1; M_fdox_c_ exceeds the tolerance by 1; M_f420_7_c_ exceeds the tolerance by 1; M_eig3p_c_ exceeds the tolerance by 1; M_h2s_e_ exceeds the tolerance by 1; M_thr_L_c_ exceeds the tolerance by 1; M_udpg_c_ exceeds the tolerance by 1; M_tsul_c_ exceeds the tolerance by 1; M_fol_c_ exceeds the tolerance by 1; M_urea_c_ exceeds the tolerance by 1; M_amet_c_ exceeds the tolerance by 1; M_gggp_c_ exceeds the tolerance by 1; M_dann_c_ exceeds the tolerance by 1; M_dpgpe_c_ exceeds the tolerance by 1; M_3hcdgggp_c_ exceeds the tolerance by 1; M_uacmam_c_ exceeds the tolerance by 1; M_4ahmmp_c_ exceeds the tolerance by 1; M_gly_c_ exceeds the tolerance by 1; M_6pgl_c_ exceeds the tolerance by 1; M_thrtrna_c_ exceeds the tolerance by 1; M_glyc_R_c_ exceeds the tolerance by 1; M_dcmp_c_ exceeds the tolerance by 1; M_man6p_c_ exceeds the tolerance by 1; M_oxa_c_ exceeds the tolerance by 1; M_dpcoa_c_ exceeds the tolerance by 1; M_2ippm_c_ exceeds the tolerance by 1; M_glu5p_c_ exceeds the tolerance by 1; M_ca2_c_ exceeds the tolerance by 1; M_r5hbzi_c_ exceeds the tolerance by 1; M_f420_2_c_ exceeds the tolerance by 1; M_glyc1p_c_ exceeds the tolerance by 1; M_sl_L_c_ exceeds the tolerance by 1; M_pan4p_c_ exceeds the tolerance by 1; M_nadph_c_ exceeds the tolerance by 1; M_meoh_c_ exceeds the tolerance by 1; M_histrna_c_ exceeds the tolerance by 1; M_trnacys_c_ exceeds the tolerance by 1; M_protrna_c_ exceeds the tolerance by 1; M_sheme_c_ exceeds the tolerance by 1; M_56dura_c_ exceeds the tolerance by 1; M_cd2_e_ exceeds the tolerance by 1; M_mcom_c_ exceeds the tolerance by 1; M_prpp_c_ exceeds the tolerance by 1; M_cbasp_c_ exceeds the tolerance by 1; M_ggdp_c_ exceeds the tolerance by 1; M_r5p_c_ exceeds the tolerance by 1; M_codhpre6_c_ exceeds the tolerance by 1; M_sucsal_c_ exceeds the tolerance by 1; M_na1_c_ exceeds the tolerance by 1; M_cdpg_c_ exceeds the tolerance by 1; M_dgdp_c_ exceeds the tolerance by 1; M_4ampm_c_ exceeds the tolerance by 1; M_tsul_e_ exceeds the tolerance by 1; M_6hmhptpp_c_ exceeds the tolerance by 1; M_3hdggpgp_c_ exceeds the tolerance by 1; M_cmaphis_c_ exceeds the tolerance by 1; M_fol_e_ exceeds the tolerance by 1; M_urea_e_ exceeds the tolerance by 1; M_pap_c_ exceeds the tolerance by 1; M_damp_c_ exceeds the tolerance by 1; M_pyr_c_ exceeds the tolerance by 1; M_6ax_c_ exceeds the tolerance by 1; M_btn_c_ exceeds the tolerance by 1; M_dohdu_c_ exceeds the tolerance by 1; M_zn2_c_ exceeds the tolerance by 1; M_h3acon_C_c_ exceeds the tolerance by 1; M_gly_e_ exceeds the tolerance by 1; M_mmh2mpt_c_ exceeds the tolerance by 1; M_copre8_c_ exceeds the tolerance by 1; M_trnaile_c_ exceeds the tolerance by 1; M_gdpmann_c_ exceeds the tolerance by 1; M_f1p_c_ exceeds the tolerance by 1; M_dtmp_c_ exceeds the tolerance by 1; M_skm_c_ exceeds the tolerance by 1; M_hista_c_ exceeds the tolerance by 1; M_ca2_e_ exceeds the tolerance by 1; M_fum_c_ exceeds the tolerance by 1; M_trnaser_c_ exceeds the tolerance by 1; M_8aonn_c_ exceeds the tolerance by 1; M_ptp_c_ exceeds the tolerance by 1; M_gthox_c_ exceeds the tolerance by 1; M_cystrna_c_ exceeds the tolerance by 1; M_trnaval_c_ exceeds the tolerance by 1; M_ind3ac_c_ exceeds the tolerance by 1; M_7mht_c_ exceeds the tolerance by 1; M_orot5p_c_ exceeds the tolerance by 1; M_meoh_e_ exceeds the tolerance by 1; M_23dhmp_c_ exceeds the tolerance by 1; M_3php_c_ exceeds the tolerance by 1; M_dhpt_c_ exceeds the tolerance by 1; M_pser_L_c_ exceeds the tolerance by 1; M_acg5p_c_ exceeds the tolerance by 1; M_dhrfap_c_ exceeds the tolerance by 1; M_dohau_c_ exceeds the tolerance by 1; M_6hmhpt_c_ exceeds the tolerance by 1; M_3uib_c_ exceeds the tolerance by 1; M_mlthf_c_ exceeds the tolerance by 1; M_ser_L_c_ exceeds the tolerance by 1; M_5pmev_c_ exceeds the tolerance by 1; M_copre3_c_ exceeds the tolerance by 1; M_na1_e_ exceeds the tolerance by 1; M_udpglcur_c_ exceeds the tolerance by 1; M_dtdprmn_c_ exceeds the tolerance by 1; M_3c3hmp_c_ exceeds the tolerance by 1; M_dhpmp_c_ exceeds the tolerance by 1; M_6pthp_c_ exceeds the tolerance by 1; M_25dthpp_c_ exceeds the tolerance by 1; M_dnad_c_ exceeds the tolerance by 1; M_pyr_e_ exceeds the tolerance by 1; M_trnaphe_c_ exceeds the tolerance by 1; M_btn_e_ exceeds the tolerance by 1; M_zn2_e_ exceeds the tolerance by 1; M_dgtp_c_ exceeds the tolerance by 1; M_hphaccoa_c_ exceeds the tolerance by 1; M_3hdpgpe_c_ exceeds the tolerance by 1; M_h2mpt_c_ exceeds the tolerance by 1; M_ptrc_c_ exceeds the tolerance by 1; M_thdp_c_ exceeds the tolerance by 1; M_Rh2cit_c_ exceeds the tolerance by 1; M_for_c_ exceeds the tolerance by 1; M_g6p_c_ exceeds the tolerance by 1; M_tih3cit_c_ exceeds the tolerance by 1; M_f430p3_c_ exceeds the tolerance by 1; M_3pg_c_ exceeds the tolerance by 1; M_ibcoa_c_ exceeds the tolerance by 1; M_skm5p_c_ exceeds the tolerance by 1; M_h2o_c_ exceeds the tolerance by 1; M_s7p_c_ exceeds the tolerance by 1; M_dcdp_c_ exceeds the tolerance by 1; M_k_c_ exceeds the tolerance by 1; M_uacgam_c_ exceeds the tolerance by 1; M_n2_c_ exceeds the tolerance by 1; M_hcit_c_ exceeds the tolerance by 1; M_ind3ac_e_ exceeds the tolerance by 1; M_2pglyc_c_ exceeds the tolerance by 1; M_lac_L_c_ exceeds the tolerance by 1; M_actn_R_c_ exceeds the tolerance by 1; M_pphn_c_ exceeds the tolerance by 1; M_cobya_c_ exceeds the tolerance by 1; M_gar_c_ exceeds the tolerance by 1; M_h2o2_c_ exceeds the tolerance by 1; M_Brfap_c_ exceeds the tolerance by 1; M_gal1p_c_ exceeds the tolerance by 1; M_dhadrtpr_c_ exceeds the tolerance by 1; M_g3p_c_ exceeds the tolerance by 1; M_4ppcys_c_ exceeds the tolerance by 1; M_trnaglu_c_ exceeds the tolerance by 1; M_btamp_c_ exceeds the tolerance by 1; M_co2dam_c_ exceeds the tolerance by 1; M_4hba_c_ exceeds the tolerance by 1; M_sertrna_c_ exceeds the tolerance by 1; M_cit_c_ exceeds the tolerance by 1; M_ch4s_c_ exceeds the tolerance by 1; M_dadp_c_ exceeds the tolerance by 1; M_cobalt2_c_ exceeds the tolerance by 1; M_cbp_c_ exceeds the tolerance by 1; M_cala_c_ exceeds the tolerance by 1; M_f420_3_c_ exceeds the tolerance by 1; M_3hdgggps_c_ exceeds the tolerance by 1; M_trnapro_c_ exceeds the tolerance by 1; M_gthrd_c_ exceeds the tolerance by 1; M_thymd_c_ exceeds the tolerance by 1; M_h2o_e_ exceeds the tolerance by 1; M_3mob_c_ exceeds the tolerance by 1; M_csn_c_ exceeds the tolerance by 1; M_k_e_ exceeds the tolerance by 1; M_dtdp_c_ exceeds the tolerance by 1; M_n2_e_ exceeds the tolerance by 1; M_2dr1p_c_ exceeds the tolerance by 1; M_1pyr5c_c_ exceeds the tolerance by 1; M_ohexa_c_ exceeds the tolerance by 1; M_thym_c_ exceeds the tolerance by 1; M_actn_R_e_ exceeds the tolerance by 1; M_dctp_c_ exceeds the tolerance by 1; M_udpgal_c_ exceeds the tolerance by 1; M_acon_T_c_ exceeds the tolerance by 1; M_3hfrdp_c_ exceeds the tolerance by 1; M_4mpetz_c_ exceeds the tolerance by 1; M_ump_c_ exceeds the tolerance by 1; M_actp_c_ exceeds the tolerance by 1; M_23dhdp_c_ exceeds the tolerance by 1; M_gam6p_c_ exceeds the tolerance by 1; M_hacon_C_c_ exceeds the tolerance by 1; M_so3_c_ exceeds the tolerance by 1; M_h2_c_ exceeds the tolerance by 1; M_tyr_L_c_ exceeds the tolerance by 1; M_acgam1p_c_ exceeds the tolerance by 1; M_cit_e_ exceeds the tolerance by 1; M_2tcc_c_ exceeds the tolerance by 1; M_phaccoa_c_ exceeds the tolerance by 1; M_val_L_c_ exceeds the tolerance by 1; M_gln_L_c_ exceeds the tolerance by 1; M_grdp_c_ exceeds the tolerance by 1; M_m3hdp_c_ exceeds the tolerance by 1; M_gua_c_ exceeds the tolerance by 1; M_sec_c_ exceeds the tolerance by 1; M_fdp_c_ exceeds the tolerance by 1; M_thf_c_ exceeds the tolerance by 1; M_ch4s_e_ exceeds the tolerance by 1; M_argsuc_c_ exceeds the tolerance by 1; M_agm_c_ exceeds the tolerance by 1; M_cobalt2_e_ exceeds the tolerance by 1; M_pant_R_c_ exceeds the tolerance by 1; M_dgggp_c_ exceeds the tolerance by 1; M_2obut_c_ exceeds the tolerance by 1; M_7ohp_c_ exceeds the tolerance by 1; M_dhadrp_c_ exceeds the tolerance by 1; M_5aprbu_c_ exceeds the tolerance by 1; M_iasp_c_ exceeds the tolerance by 1; M_datp_c_ exceeds the tolerance by 1; M_tyrtrna_c_ exceeds the tolerance by 1; M_etha_c_ exceeds the tolerance by 1; M_hmbil_c_ exceeds the tolerance by 1; M_phe_L_c_ exceeds the tolerance by 1; M_fc1p_c_ exceeds the tolerance by 1; M_5aizc_c_ exceeds the tolerance by 1; M_dhp23cp_c_ exceeds the tolerance by 1; M_acetone_c_ exceeds the tolerance by 1; M_dttp_c_ exceeds the tolerance by 1; M_dma_c_ exceeds the tolerance by 1; M_ahdt_c_ exceeds the tolerance by 1; M_nadh_c_ exceeds the tolerance by 1; M_trnatrp_c_ exceeds the tolerance by 1; M_trnalys_c_ exceeds the tolerance by 1; M_copre4_c_ exceeds the tolerance by 1; M_unknown_rbfdeg_c_ exceeds the tolerance by 1; M_h4spt_c_ exceeds the tolerance by 1; M_2mahmp_c_ exceeds the tolerance by 1; M_glytrna_c_ exceeds the tolerance by 1; M_so3_e_ exceeds the tolerance by 1; M_mal_L_c_ exceeds the tolerance by 1; M_h2_e_ exceeds the tolerance by 1; M_pi_c_ exceeds the tolerance by 1; M_5pr5hbz_c_ exceeds the tolerance by 1; M_dmh2mpt_c_ exceeds the tolerance by 1; M_val_L_e_ exceeds the tolerance by 1; M_trnahis_c_ exceeds the tolerance by 1; M_7mhp_c_ exceeds the tolerance by 1; M_pep_c_ exceeds the tolerance by 1; M_ppap_c_ exceeds the tolerance by 1; M_dkdofp_c_ exceeds the tolerance by 1; M_5mthf_c_ exceeds the tolerance by 1; M_adocbip_c_ exceeds the tolerance by 1; M_trnaleu_c_ exceeds the tolerance by 1; M_fdred_c_ exceeds the tolerance by 1; M_co_c_ exceeds the tolerance by 1; M_3spyr_c_ exceeds the tolerance by 1; M_trdox_c_ exceeds the tolerance by 1; M_etha_e_ exceeds the tolerance by 1; M_scl_c_ exceeds the tolerance by 1; M_dtbt_c_ exceeds the tolerance by 1; M_dmlz_c_ exceeds the tolerance by 1; M_3dhsk_c_ exceeds the tolerance by 1; M_leu_L_c_ exceeds the tolerance by 1; M_pnto_R_c_ exceeds the tolerance by 1; M_23dpg_c_ exceeds the tolerance by 1; M_mleneh4spt_c_ exceeds the tolerance by 1; M_f430_c_ exceeds the tolerance by 1; M_prbamp_c_ exceeds the tolerance by 1; M_dma_e_ exceeds the tolerance by 1; M_cu2_c_ exceeds the tolerance by 1; M_unknown_rbfdeg_e_ exceeds the tolerance by 1; M_appl_c_ exceeds the tolerance by 1; M_dpgpg_c_ exceeds the tolerance by 1; M_cbl1hbi_c_ exceeds the tolerance by 1; M_2ppoh_c_ exceeds the tolerance by 1; M_udp_c_ exceeds the tolerance by 1; M_adcobdam_c_ exceeds the tolerance by 1; M_pi_e_ exceeds the tolerance by 1; M_akg_c_ exceeds the tolerance by 1; M_camp_c_ exceeds the tolerance by 1; M_f390a_c_ exceeds the tolerance by 1; M_glyb_c_ exceeds the tolerance by 1; M_phom_c_ exceeds the tolerance by 1; M_2cpr5p_c_ exceeds the tolerance by 1; M_f420_4_c_ exceeds the tolerance by 1; M_hatrz_c_ exceeds the tolerance by 1; M_5mdr1p_c_ exceeds the tolerance by 1; M_co_e_ exceeds the tolerance by 1; M_dggpg_c_ exceeds the tolerance by 1; M_ac_c_ exceeds the tolerance by 1; M_3hdgggp_c_ exceeds the tolerance by 1; M_hisp_c_ exceeds the tolerance by 1; M_uaccg_c_ exceeds the tolerance by 1; M_23dhmb_c_ exceeds the tolerance by 1; M_acald_c_ exceeds the tolerance by 1; M_aacoa_c_ exceeds the tolerance by 1; M_acser_c_ exceeds the tolerance by 1; M_aconm_c_ exceeds the tolerance by 1; M_leu_L_e_ exceeds the tolerance by 1; M_pnto_R_e_ exceeds the tolerance by 1; M_man1p_c_ exceeds the tolerance by 1; M_Shcit_c_ exceeds the tolerance by 1; M_nabl_c_ exceeds the tolerance by 1; M_cu2_e_ exceeds the tolerance by 1; M_hxan_c_ exceeds the tolerance by 1; M_so4_c_ exceeds the tolerance by 1; M_db4p_c_ exceeds the tolerance by 1; M_indole_c_ exceeds the tolerance by 1; M_cbl1hbi_e_ exceeds the tolerance by 1; M_3c2hmp_c_ exceeds the tolerance by 1; M_applp_c_ exceeds the tolerance by 1; M_mettrna_c_ exceeds the tolerance by 1; M_h4mpt_c_ exceeds the tolerance by 1; M_coa_c_ exceeds the tolerance by 1; M_utp_c_ exceeds the tolerance by 1; M_co2_c_ exceeds the tolerance by 1; M_glyb_e_ exceeds the tolerance by 1; M_trdrd_c_ exceeds the tolerance by 1
BIOMD0000001099: M_cpd02255_c0 exceeds the tolerance by 1; M_cpd00067_c0 exceeds the tolerance by 1; M_cpd00011_c0 exceeds the tolerance by 1; M_cpd00938_c0 exceeds the tolerance by 1; M_cpd02152_c0 exceeds the tolerance by 1; M_cpd00106_c0 exceeds the tolerance by 1; M_cpd00051_c0 exceeds the tolerance by 1; M_cpd03671_c0 exceeds the tolerance by 1; M_cpd02611_c0 exceeds the tolerance by 1; M_cpd00010_c0 exceeds the tolerance by 1; M_cpd00022_c0 exceeds the tolerance by 1; M_cpd11420_c0 exceeds the tolerance by 1; M_cpd00790_c0 exceeds the tolerance by 1; M_cpd00135_c0 exceeds the tolerance by 1; M_cpd00081_c0 exceeds the tolerance by 1; M_cpd00029_c0 exceeds the tolerance by 1; M_cpd00268_c0 exceeds the tolerance by 1; M_cpd11421_c0 exceeds the tolerance by 1; M_cpd00060_c0 exceeds the tolerance by 1; M_cpd00001_c0 exceeds the tolerance by 1; M_cpd00035_c0 exceeds the tolerance by 1; M_cpd11590_c0 exceeds the tolerance by 1; M_cpd00161_c0 exceeds the tolerance by 1; M_cpd11582_c0 exceeds the tolerance by 1; M_cpd03761_c0 exceeds the tolerance by 1; M_cpd00006_c0 exceeds the tolerance by 1; M_cpd03760_c0 exceeds the tolerance by 1; M_cpd00005_c0 exceeds the tolerance by 1; M_cpd00254_e0 exceeds the tolerance by 1; M_cpd00254_c0 exceeds the tolerance by 1; M_cpd00036_c0 exceeds the tolerance by 1; M_cpd02857_c0 exceeds the tolerance by 1; M_cpd00699_c0 exceeds the tolerance by 1; M_cpd00009_c0 exceeds the tolerance by 1; M_cpd03519_c0 exceeds the tolerance by 1; M_cpd03518_c0 exceeds the tolerance by 1; M_cpd00047_c0 exceeds the tolerance by 1; M_cpd02555_c0 exceeds the tolerance by 1; M_cpd02738_c0 exceeds the tolerance by 1; M_cpd00130_c0 exceeds the tolerance by 1; M_cpd00032_c0 exceeds the tolerance by 1; M_cpd00004_c0 exceeds the tolerance by 1; M_cpd00003_c0 exceeds the tolerance by 1; M_cpd00346_c0 exceeds the tolerance by 1; M_cpd00227_c0 exceeds the tolerance by 1; M_cpd02656_c0 exceeds the tolerance by 1; M_cpd02882_c0 exceeds the tolerance by 1; M_cpd00220_c0 exceeds the tolerance by 1; M_cpd02893_c0 exceeds the tolerance by 1; M_cpd00002_c0 exceeds the tolerance by 1; M_cpd00008_c0 exceeds the tolerance by 1; M_cpd02140_c0 exceeds the tolerance by 1; M_cpd00242_c0 exceeds the tolerance by 1; M_cpd11589_c0 exceeds the tolerance by 1; M_cpd00041_c0 exceeds the tolerance by 1; M_cpd00033_c0 exceeds the tolerance by 1; M_cpd00840_c0 exceeds the tolerance by 1; M_cpd00039_c0 exceeds the tolerance by 1; M_cpd14960_c0 exceeds the tolerance by 1; M_cpd08371_c0 exceeds the tolerance by 1; M_cpd00071_c0 exceeds the tolerance by 1; M_cpd00123_c0 exceeds the tolerance by 1; M_cpd01646_c0 exceeds the tolerance by 1; M_cpd00239_c0 exceeds the tolerance by 1; M_cpd15693_c0 exceeds the tolerance by 1; M_cpd00054_c0 exceeds the tolerance by 1; M_cpd00046_c0 exceeds the tolerance by 1; M_cpd15687_c0 exceeds the tolerance by 1; M_cpd00557_c0 exceeds the tolerance by 1; M_cpd03426_c0 exceeds the tolerance by 1; M_cpd10515_c0 exceeds the tolerance by 1; M_cpd00061_c0 exceeds the tolerance by 1; M_cpd00482_c0 exceeds the tolerance by 1; M_cpd15682_c0 exceeds the tolerance by 1; M_cpd15688_c0 exceeds the tolerance by 1; M_cpd00012_c0 exceeds the tolerance by 1; M_cpd00052_c0 exceeds the tolerance by 1; M_cpd15421_c0 exceeds the tolerance by 1; M_cpd15526_c0 exceeds the tolerance by 1; M_cpd02069_c0 exceeds the tolerance by 1; M_cpd00169_c0 exceeds the tolerance by 1; M_cpd00038_c0 exceeds the tolerance by 1; M_cpd00009_e0 exceeds the tolerance by 1; M_cpd02333_c0 exceeds the tolerance by 1; M_cpd03470_c0 exceeds the tolerance by 1; M_cpd00095_c0 exceeds the tolerance by 1; M_cpd08366_c0 exceeds the tolerance by 1; M_cpd02826_c0 exceeds the tolerance by 1; M_cpd00072_c0 exceeds the tolerance by 1; M_cpd00079_c0 exceeds the tolerance by 1; M_cpd00118_c0 exceeds the tolerance by 1; M_cpd00147_c0 exceeds the tolerance by 1; M_cpd00264_c0 exceeds the tolerance by 1; M_cpd00837_c0 exceeds the tolerance by 1; M_cpd00013_c0 exceeds the tolerance by 1; M_cpd00023_c0 exceeds the tolerance by 1; M_cpd00053_c0 exceeds the tolerance by 1; M_cpd00238_c0 exceeds the tolerance by 1; M_cpd00102_c0 exceeds the tolerance by 1; M_cpd00198_c0 exceeds the tolerance by 1; M_cpd00101_c0 exceeds the tolerance by 1; M_cpd00115_c0 exceeds the tolerance by 1; M_cpd00246_c0 exceeds the tolerance by 1; M_cpd00114_c0 exceeds the tolerance by 1; M_cpd00084_c0 exceeds the tolerance by 1; M_cpd15603_c0 exceeds the tolerance by 1; M_cpd00358_c0 exceeds the tolerance by 1; M_cpd00978_c0 exceeds the tolerance by 1; M_cpd15555_c0 exceeds the tolerance by 1; M_cpd15419_c0 exceeds the tolerance by 1; M_cpd00357_c0 exceeds the tolerance by 1; M_cpd00297_c0 exceeds the tolerance by 1; M_cpd00655_c0 exceeds the tolerance by 1; M_cpd00343_c0 exceeds the tolerance by 1; M_cpd00146_c0 exceeds the tolerance by 1; M_cpd00200_c0 exceeds the tolerance by 1; M_cpd00024_c0 exceeds the tolerance by 1; M_cpd00107_c0 exceeds the tolerance by 1; M_cpd01777_c0 exceeds the tolerance by 1; M_cpd01775_c0 exceeds the tolerance by 1; M_cpd00834_c0 exceeds the tolerance by 1; M_cpd02666_c0 exceeds the tolerance by 1; M_cpd02979_c0 exceeds the tolerance by 1; M_cpd02991_c0 exceeds the tolerance by 1; M_cpd00290_c0 exceeds the tolerance by 1; M_cpd00918_c0 exceeds the tolerance by 1; M_cpd00342_c0 exceeds the tolerance by 1; M_cpd11586_c0 exceeds the tolerance by 1; M_cpd00067_e0 exceeds the tolerance by 1; M_cpd00205_e0 exceeds the tolerance by 1; M_cpd00205_c0 exceeds the tolerance by 1; M_cpd00018_c0 exceeds the tolerance by 1; M_cpd03078_c0 exceeds the tolerance by 1; M_cpd01078_c0 exceeds the tolerance by 1; M_cpd00091_c0 exceeds the tolerance by 1; M_cpd00810_c0 exceeds the tolerance by 1; M_cpd00019_c0 exceeds the tolerance by 1; M_cpd01620_c0 exceeds the tolerance by 1; M_cpd00017_c0 exceeds the tolerance by 1; M_cpd03420_c0 exceeds the tolerance by 1; M_cpd14961_c0 exceeds the tolerance by 1; M_cpd08375_c0 exceeds the tolerance by 1; M_cpd00092_c0 exceeds the tolerance by 1; M_cpd00307_c0 exceeds the tolerance by 1; M_cpd15747_c0 exceeds the tolerance by 1; M_cpd00014_c0 exceeds the tolerance by 1; M_cpd15765_c0 exceeds the tolerance by 1; M_cpd00037_c0 exceeds the tolerance by 1; M_cpd11436_c0 exceeds the tolerance by 1; M_cpd11437_c0 exceeds the tolerance by 1; M_cpd01997_c0 exceeds the tolerance by 1; M_cpd00218_c0 exceeds the tolerance by 1; M_cpd00873_c0 exceeds the tolerance by 1; M_cpd02904_c0 exceeds the tolerance by 1; M_cpd03496_c0 exceeds the tolerance by 1; M_cpd03495_c0 exceeds the tolerance by 1; M_cpd11621_c0 exceeds the tolerance by 1; M_cpd11620_c0 exceeds the tolerance by 1; M_cpd08369_c0 exceeds the tolerance by 1; M_cpd08368_c0 exceeds the tolerance by 1; M_cpd17041_c0 exceeds the tolerance by 1; M_cpd03492_c0 exceeds the tolerance by 1; M_cpd03491_c0 exceeds the tolerance by 1; M_cpd02210_c0 exceeds the tolerance by 1; M_cpd00359_c0 exceeds the tolerance by 1; M_cpd02720_c0 exceeds the tolerance by 1; M_cpd00931_c0 exceeds the tolerance by 1; M_cpd15768_c0 exceeds the tolerance by 1; M_cpd15750_c0 exceeds the tolerance by 1; M_cpd00113_c0 exceeds the tolerance by 1; M_cpd00289_c0 exceeds the tolerance by 1; M_cpd00350_c0 exceeds the tolerance by 1; M_cpd02498_c0 exceeds the tolerance by 1; M_cpd00809_c0 exceeds the tolerance by 1; M_cpd00361_c0 exceeds the tolerance by 1; M_cpd00668_c0 exceeds the tolerance by 1; M_cpd00062_c0 exceeds the tolerance by 1; M_cpd00288_c0 exceeds the tolerance by 1; M_cpd02775_c0 exceeds the tolerance by 1; M_cpd00939_c0 exceeds the tolerance by 1; M_cpd00868_c0 exceeds the tolerance by 1; M_cpd00069_c0 exceeds the tolerance by 1; M_cpd00209_c0 exceeds the tolerance by 1; M_cpd00209_e0 exceeds the tolerance by 1; M_cpd03421_c0 exceeds the tolerance by 1; M_cpd17042_c0 exceeds the tolerance by 1; M_cpd00149_c0 exceeds the tolerance by 1; M_cpd00504_c0 exceeds the tolerance by 1; M_cpd00516_c0 exceeds the tolerance by 1; M_cpd00132_c0 exceeds the tolerance by 1; M_cpd11581_c0 exceeds the tolerance by 1; M_cpd02978_c0 exceeds the tolerance by 1; M_cpd00177_c0 exceeds the tolerance by 1; M_cpd02737_c0 exceeds the tolerance by 1; M_cpd02438_c0 exceeds the tolerance by 1; M_cpd00895_c0 exceeds the tolerance by 1; M_cpd02246_c0 exceeds the tolerance by 1; M_cpd00117_c0 exceeds the tolerance by 1; M_cpd00128_c0 exceeds the tolerance by 1; M_cpd02574_c0 exceeds the tolerance by 1; M_cpd15684_c0 exceeds the tolerance by 1; M_cpd15678_c0 exceeds the tolerance by 1; M_cpd02201_c0 exceeds the tolerance by 1; M_cpd00508_c0 exceeds the tolerance by 1; M_cpd02535_c0 exceeds the tolerance by 1; M_cpd00930_c0 exceeds the tolerance by 1; M_cpd00807_c0 exceeds the tolerance by 1; M_cpd00015_c0 exceeds the tolerance by 1; M_cpd00982_c0 exceeds the tolerance by 1; M_cpd08372_c0 exceeds the tolerance by 1; M_cpd00956_c0 exceeds the tolerance by 1; M_cpd00286_c0 exceeds the tolerance by 1; M_cpd00086_c0 exceeds the tolerance by 1; M_cpd00141_c0 exceeds the tolerance by 1; M_cpd00236_c0 exceeds the tolerance by 1; M_cpd03706_c0 exceeds the tolerance by 1; M_cpd00274_c0 exceeds the tolerance by 1; M_cpd00171_c0 exceeds the tolerance by 1; M_cpd15422_c0 exceeds the tolerance by 1; M_cpd15523_c0 exceeds the tolerance by 1; M_cpd00096_c0 exceeds the tolerance by 1; M_cpd01716_c0 exceeds the tolerance by 1; M_cpd08211_c0 exceeds the tolerance by 1; M_cpd02605_c0 exceeds the tolerance by 1; M_cpd02693_c0 exceeds the tolerance by 1; M_cpd03608_c0 exceeds the tolerance by 1; M_cpd03607_c0 exceeds the tolerance by 1; M_cpd00299_c0 exceeds the tolerance by 1; M_cpd00338_c0 exceeds the tolerance by 1; M_cpd00689_c0 exceeds the tolerance by 1; M_cpd03835_c0 exceeds the tolerance by 1; M_cpd00065_c0 exceeds the tolerance by 1; M_cpd00644_c0 exceeds the tolerance by 1; M_cpd15554_c0 exceeds the tolerance by 1; M_cpd00863_c0 exceeds the tolerance by 1; M_cpd10162_c0 exceeds the tolerance by 1; M_cpd00533_c0 exceeds the tolerance by 1; M_cpd00356_c0 exceeds the tolerance by 1; M_cpd15604_c0 exceeds the tolerance by 1; M_cpd02884_c0 exceeds the tolerance by 1; M_cpd00175_c0 exceeds the tolerance by 1; M_cpd02569_c0 exceeds the tolerance by 1; M_cpd00206_c0 exceeds the tolerance by 1; M_cpd03834_c0 exceeds the tolerance by 1; M_cpd03839_c0 exceeds the tolerance by 1; M_cpd00219_c0 exceeds the tolerance by 1; M_cpd00616_c0 exceeds the tolerance by 1; M_cpd15524_c0 exceeds the tolerance by 1; M_cpd15420_c0 exceeds the tolerance by 1; M_cpd15527_c0 exceeds the tolerance by 1; M_cpd00016_c0 exceeds the tolerance by 1; M_cpd00971_c0 exceeds the tolerance by 1; M_cpd00971_e0 exceeds the tolerance by 1; M_cpd00129_c0 exceeds the tolerance by 1; M_cpd00129_e0 exceeds the tolerance by 1; M_cpd15557_c0 exceeds the tolerance by 1; M_cpd00203_c0 exceeds the tolerance by 1; M_cpd00812_c0 exceeds the tolerance by 1; M_cpd00332_c0 exceeds the tolerance by 1; M_cpd00143_c0 exceeds the tolerance by 1; M_cpd03560_c0 exceeds the tolerance by 1; M_cpd00793_c0 exceeds the tolerance by 1; M_cpd02894_c0 exceeds the tolerance by 1; M_cpd02654_c0 exceeds the tolerance by 1; M_cpd00782_c0 exceeds the tolerance by 1; M_cpd01727_c0 exceeds the tolerance by 1; M_cpd11585_c0 exceeds the tolerance by 1; M_cpd15754_c0 exceeds the tolerance by 1; M_cpd15772_c0 exceeds the tolerance by 1; M_cpd00103_c0 exceeds the tolerance by 1; M_cpd15748_c0 exceeds the tolerance by 1; M_cpd15766_c0 exceeds the tolerance by 1; M_cpd11593_c0 exceeds the tolerance by 1; M_cpd11440_c0 exceeds the tolerance by 1; M_cpd11441_c0 exceeds the tolerance by 1; M_cpd03666_c0 exceeds the tolerance by 1; M_cpd00448_c0 exceeds the tolerance by 1; M_cpd00100_c0 exceeds the tolerance by 1; M_cpd00638_c0 exceeds the tolerance by 1; M_cpd02851_c0 exceeds the tolerance by 1; M_cpd02921_c0 exceeds the tolerance by 1; M_cpd00142_c0 exceeds the tolerance by 1; M_cpd00279_c0 exceeds the tolerance by 1; M_cpd00020_c0 exceeds the tolerance by 1; M_cpd00093_c0 exceeds the tolerance by 1; M_cpd00216_c0 exceeds the tolerance by 1; M_cpd01017_c0 exceeds the tolerance by 1; M_cpd00213_c0 exceeds the tolerance by 1; M_cpd00449_c0 exceeds the tolerance by 1; M_cpd15692_c0 exceeds the tolerance by 1; M_cpd15686_c0 exceeds the tolerance by 1; M_cpd00859_c0 exceeds the tolerance by 1; M_cpd11580_c0 exceeds the tolerance by 1; M_cpd00025_c0 exceeds the tolerance by 1; M_cpd00932_c0 exceeds the tolerance by 1; M_cpd03049_c0 exceeds the tolerance by 1; M_cpd00498_c0 exceeds the tolerance by 1; M_cpd00056_c0 exceeds the tolerance by 1; M_cpd00094_c0 exceeds the tolerance by 1; M_cpd00282_c0 exceeds the tolerance by 1; M_cpd00247_c0 exceeds the tolerance by 1; M_cpd15685_c0 exceeds the tolerance by 1; M_cpd15679_c0 exceeds the tolerance by 1; M_cpd02817_c0 exceeds the tolerance by 1; M_cpd02935_c0 exceeds the tolerance by 1; M_cpd00735_c0 exceeds the tolerance by 1; M_cpd00643_c0 exceeds the tolerance by 1; M_cpd00774_c0 exceeds the tolerance by 1; M_cpd00957_c0 exceeds the tolerance by 1; M_cpd00210_c0 exceeds the tolerance by 1; M_cpd00210_e0 exceeds the tolerance by 1; M_cpd02791_c0 exceeds the tolerance by 1; M_cpd17043_c0 exceeds the tolerance by 1; M_cpd00666_c0 exceeds the tolerance by 1; M_cpd02345_c0 exceeds the tolerance by 1; M_cpd00528_c0 exceeds the tolerance by 1; M_cpd11640_c0 exceeds the tolerance by 1; M_cpd00792_c0 exceeds the tolerance by 1; M_cpd00649_c0 exceeds the tolerance by 1; M_cpd00136_c0 exceeds the tolerance by 1; M_cpd02678_c0 exceeds the tolerance by 1; M_cpd00492_c0 exceeds the tolerance by 1; M_cpd11432_c0 exceeds the tolerance by 1; M_cpd11431_c0 exceeds the tolerance by 1; M_cpd00053_e0 exceeds the tolerance by 1; M_cpd00298_c0 exceeds the tolerance by 1; M_cpd02030_c0 exceeds the tolerance by 1; M_cpd00322_c0 exceeds the tolerance by 1; M_cpd15553_c0 exceeds the tolerance by 1; M_cpd15423_c0 exceeds the tolerance by 1; M_cpd00540_c0 exceeds the tolerance by 1; M_cpd00540_e0 exceeds the tolerance by 1; M_cpd00251_c0 exceeds the tolerance by 1; M_cpd00068_c0 exceeds the tolerance by 1; M_cpd00090_c0 exceeds the tolerance by 1; M_cpd00151_c0 exceeds the tolerance by 1; M_cpd01587_c0 exceeds the tolerance by 1; M_cpd15690_c0 exceeds the tolerance by 1; M_cpd00066_c0 exceeds the tolerance by 1; M_cpd15605_c0 exceeds the tolerance by 1; M_cpd00226_c0 exceeds the tolerance by 1; M_cpd00226_e0 exceeds the tolerance by 1; M_cpd01710_c0 exceeds the tolerance by 1; M_cpd00202_c0 exceeds the tolerance by 1; M_cpd03091_c0 exceeds the tolerance by 1; M_cpd01311_c0 exceeds the tolerance by 1; M_cpd00104_c0 exceeds the tolerance by 1; M_cpd00074_c0 exceeds the tolerance by 1; M_cpd02375_c0 exceeds the tolerance by 1; M_cpd00241_c0 exceeds the tolerance by 1; M_cpd01324_c0 exceeds the tolerance by 1; M_cpd00119_c0 exceeds the tolerance by 1; M_cpd01080_c0 exceeds the tolerance by 1; M_cpd00327_c0 exceeds the tolerance by 1; M_cpd15522_c0 exceeds the tolerance by 1; M_cpd10515_e0 exceeds the tolerance by 1; M_cpd00641_c0 exceeds the tolerance by 1; M_cpd08928_c0 exceeds the tolerance by 1; M_cpd02547_c0 exceeds the tolerance by 1; M_cpd03914_c0 exceeds the tolerance by 1; M_cpd11584_c0 exceeds the tolerance by 1; M_cpd11430_c0 exceeds the tolerance by 1; M_cpd11435_c0 exceeds the tolerance by 1; M_cpd08373_c0 exceeds the tolerance by 1; M_cpd00099_c0 exceeds the tolerance by 1; M_cpd00099_e0 exceeds the tolerance by 1; M_cpd00047_e0 exceeds the tolerance by 1; M_cpd11592_c0 exceeds the tolerance by 1; M_cpd08370_c0 exceeds the tolerance by 1; M_cpd01982_c0 exceeds the tolerance by 1; M_cpd00755_c0 exceeds the tolerance by 1; M_cpd02843_c0 exceeds the tolerance by 1; M_cpd00497_c0 exceeds the tolerance by 1; M_cpd11587_c0 exceeds the tolerance by 1; M_cpd11225_c0 exceeds the tolerance by 1; M_cpd02679_c0 exceeds the tolerance by 1; M_cpd00800_c0 exceeds the tolerance by 1; M_cpd00355_c0 exceeds the tolerance by 1; M_cpd15683_c0 exceeds the tolerance by 1; M_cpd15689_c0 exceeds the tolerance by 1; M_cpd11438_c0 exceeds the tolerance by 1; M_cpd11439_c0 exceeds the tolerance by 1; M_cpd15680_c0 exceeds the tolerance by 1; M_cpd00078_c0 exceeds the tolerance by 1; M_cpd15746_c0 exceeds the tolerance by 1; M_cpd15764_c0 exceeds the tolerance by 1; M_cpd00477_c0 exceeds the tolerance by 1; M_cpd00026_c0 exceeds the tolerance by 1; M_cpd00144_c0 exceeds the tolerance by 1; M_cpd02394_c0 exceeds the tolerance by 1; M_cpd00383_c0 exceeds the tolerance by 1; M_cpd00363_c0 exceeds the tolerance by 1; M_cpd11912_c0 exceeds the tolerance by 1; M_cpd12227_c0 exceeds the tolerance by 1; M_cpd01024_c0 exceeds the tolerance by 1; M_cpd15751_c0 exceeds the tolerance by 1; M_cpd15769_c0 exceeds the tolerance by 1; M_cpd02642_c0 exceeds the tolerance by 1; M_cpd11434_c0 exceeds the tolerance by 1; M_cpd11433_c0 exceeds the tolerance by 1; M_cpd01695_c0 exceeds the tolerance by 1; M_cpd03847_c0 exceeds the tolerance by 1; M_cpd00307_e0 exceeds the tolerance by 1; M_cpd02552_c0 exceeds the tolerance by 1; M_cpd15417_c0 exceeds the tolerance by 1; M_cpd15552_c0 exceeds the tolerance by 1; M_cpd00822_c0 exceeds the tolerance by 1; M_cpd03833_c0 exceeds the tolerance by 1; M_cpd08210_c0 exceeds the tolerance by 1; M_cpd15606_c0 exceeds the tolerance by 1; M_cpd00334_c0 exceeds the tolerance by 1; M_cpd00806_c0 exceeds the tolerance by 1; M_cpd00156_c0 exceeds the tolerance by 1; M_cpd00134_c0 exceeds the tolerance by 1; M_cpd00214_c0 exceeds the tolerance by 1; M_cpd15767_c0 exceeds the tolerance by 1; M_cpd15749_c0 exceeds the tolerance by 1; M_cpd00031_c0 exceeds the tolerance by 1; M_cpd00861_c0 exceeds the tolerance by 1; M_cpd00446_c0 exceeds the tolerance by 1; M_cpd00182_c0 exceeds the tolerance by 1; M_cpd00292_c0 exceeds the tolerance by 1; M_cpd01977_c0 exceeds the tolerance by 1; M_cpd00283_c0 exceeds the tolerance by 1; M_cpd03487_c0 exceeds the tolerance by 1; M_cpd03488_c0 exceeds the tolerance by 1; M_cpd00089_c0 exceeds the tolerance by 1; M_cpd15302_c0 exceeds the tolerance by 1; M_cpd00155_c0 exceeds the tolerance by 1; M_cpd03913_c0 exceeds the tolerance by 1; M_cpd03832_c0 exceeds the tolerance by 1; M_cpd00764_c0 exceeds the tolerance by 1; M_cpd11588_c0 exceeds the tolerance by 1; M_cpd02655_c0 exceeds the tolerance by 1; M_cpd00936_c0 exceeds the tolerance by 1; M_cpd11583_c0 exceeds the tolerance by 1; M_cpd15521_c0 exceeds the tolerance by 1; M_cpd00043_c0 exceeds the tolerance by 1; M_cpd00092_e0 exceeds the tolerance by 1; M_cpd15691_c0 exceeds the tolerance by 1; M_cpd15269_c0 exceeds the tolerance by 1; M_cpd15274_c0 exceeds the tolerance by 1; M_cpd11591_c0 exceeds the tolerance by 1; M_cpd15753_c0 exceeds the tolerance by 1; M_cpd15771_c0 exceeds the tolerance by 1; M_cpd01914_c0 exceeds the tolerance by 1; M_cpd15558_c0 exceeds the tolerance by 1; M_cpd02701_c0 exceeds the tolerance by 1; M_cpd00149_e0 exceeds the tolerance by 1; M_cpd15556_c0 exceeds the tolerance by 1; M_cpd15418_c0 exceeds the tolerance by 1; M_cpd00521_c0 exceeds the tolerance by 1; M_cpd02616_c0 exceeds the tolerance by 1; M_cpd12005_c0 exceeds the tolerance by 1; M_cpd12225_c0 exceeds the tolerance by 1; M_cpd15681_c0 exceeds the tolerance by 1; M_cpd15694_c0 exceeds the tolerance by 1; M_cpd00064_c0 exceeds the tolerance by 1; M_cpd15525_c0 exceeds the tolerance by 1; M_cpd00946_c0 exceeds the tolerance by 1; M_cpd00126_c0 exceeds the tolerance by 1; M_cpd00311_c0 exceeds the tolerance by 1; M_cpd00485_c0 exceeds the tolerance by 1; M_cpd00235_c0 exceeds the tolerance by 1; M_cpd00305_c0 exceeds the tolerance by 1; M_cpd00305_e0 exceeds the tolerance by 1; M_cpd00295_c0 exceeds the tolerance by 1; M_cpd00073_c0 exceeds the tolerance by 1; M_cpd00073_e0 exceeds the tolerance by 1; M_cpd15238_c0 exceeds the tolerance by 1; M_cpd15237_c0 exceeds the tolerance by 1; M_cpd00830_c0 exceeds the tolerance by 1; M_cpd01974_c0 exceeds the tolerance by 1; M_cpd00712_c0 exceeds the tolerance by 1; M_cpd00408_c0 exceeds the tolerance by 1; M_cpd02636_c0 exceeds the tolerance by 1; M_cpd00367_c0 exceeds the tolerance by 1; M_cpd00738_c0 exceeds the tolerance by 1; M_cpd15770_c0 exceeds the tolerance by 1; M_cpd15752_c0 exceeds the tolerance by 1; M_cpd15677_c0 exceeds the tolerance by 1; M_cpd00152_c0 exceeds the tolerance by 1; M_cpd10516_c0 exceeds the tolerance by 1; M_cpd10516_e0 exceeds the tolerance by 1; M_cpd00001_e0 exceeds the tolerance by 1; M_cpd00011_e0 exceeds the tolerance by 1; M_cpd02465_c0 exceeds the tolerance by 1; M_cpd02211_c0 exceeds the tolerance by 1; M_cpd00058_c0 exceeds the tolerance by 1; M_cpd00042_c0 exceeds the tolerance by 1; M_cpd12370_c0 exceeds the tolerance by 1; M_cpd11416_c0 exceeds the tolerance by 1; M_cpd00063_c0 exceeds the tolerance by 1; M_cpd03422_c0 exceeds the tolerance by 1; M_cpd00166_c0 exceeds the tolerance by 1; M_cpd11493_c0 exceeds the tolerance by 1; M_cpd03443_c0 exceeds the tolerance by 1; M_cpd03444_c0 exceeds the tolerance by 1; M_cpd11524_c0 exceeds the tolerance by 1; M_cpd01772_c0 exceeds the tolerance by 1; M_cpd03451_c0 exceeds the tolerance by 1; M_cpd00421_c0 exceeds the tolerance by 1; M_cpd11492_c0 exceeds the tolerance by 1; M_cpd11525_c0 exceeds the tolerance by 1; M_cpd00034_e0 exceeds the tolerance by 1; M_cpd11496_c0 exceeds the tolerance by 1; M_cpd11495_c0 exceeds the tolerance by 1; M_cpd02083_c0 exceeds the tolerance by 1; M_cpd00817_c0 exceeds the tolerance by 1; M_cpd11515_c0 exceeds the tolerance by 1; M_cpd01741_e0 exceeds the tolerance by 1; M_cpd11488_c0 exceeds the tolerance by 1; M_cpd15268_c0 exceeds the tolerance by 1; M_cpd01270_c0 exceeds the tolerance by 1; M_cpd04122_c0 exceeds the tolerance by 1; M_cpd00050_c0 exceeds the tolerance by 1; M_cpd00027_c0 exceeds the tolerance by 1; M_cpd11532_c0 exceeds the tolerance by 1; M_cpd00080_c0 exceeds the tolerance by 1; M_cpd11533_c0 exceeds the tolerance by 1; M_cpd03918_c0 exceeds the tolerance by 1; M_cpd00355_e0 exceeds the tolerance by 1; M_cpd00626_c0 exceeds the tolerance by 1; M_cpd02120_c0 exceeds the tolerance by 1; M_cpd03448_c0 exceeds the tolerance by 1; M_cpd11516_c0 exceeds the tolerance by 1; M_cpd11507_c0 exceeds the tolerance by 1; M_cpd11508_c0 exceeds the tolerance by 1; M_cpd11504_c0 exceeds the tolerance by 1; M_cpd03447_c0 exceeds the tolerance by 1; M_cpd00058_e0 exceeds the tolerance by 1; M_cpd00906_c0 exceeds the tolerance by 1; M_cpd11540_c0 exceeds the tolerance by 1; M_cpd00760_c0 exceeds the tolerance by 1; M_cpd11499_c0 exceeds the tolerance by 1; M_cpd03919_c0 exceeds the tolerance by 1; M_cpd03917_c0 exceeds the tolerance by 1; M_cpd02039_c0 exceeds the tolerance by 1; M_cpd02590_c0 exceeds the tolerance by 1; M_cpd02557_c0 exceeds the tolerance by 1; M_cpd11484_c0 exceeds the tolerance by 1; M_cpd11529_c0 exceeds the tolerance by 1; M_cpd00558_e0 exceeds the tolerance by 1; M_cpd15479_c0 exceeds the tolerance by 1; M_cpd00030_e0 exceeds the tolerance by 1; M_cpd02685_c0 exceeds the tolerance by 1; M_cpd03916_c0 exceeds the tolerance by 1; M_cpd03915_c0 exceeds the tolerance by 1; M_cpd00063_e0 exceeds the tolerance by 1; M_cpd03920_c0 exceeds the tolerance by 1; M_cpd11503_c0 exceeds the tolerance by 1; M_cpd11536_c0 exceeds the tolerance by 1; M_cpd00655_e0 exceeds the tolerance by 1; M_cpd03289_c0 exceeds the tolerance by 1; M_cpd08316_c0 exceeds the tolerance by 1; M_cpd15489_c0 exceeds the tolerance by 1; M_cpd04920_c0 exceeds the tolerance by 1; M_cpd11521_c0 exceeds the tolerance by 1; M_cpd11520_c0 exceeds the tolerance by 1; M_cpd02021_c0 exceeds the tolerance by 1; M_cpd11511_c0 exceeds the tolerance by 1; M_cpd00045_c0 exceeds the tolerance by 1; M_cpd02886_c0 exceeds the tolerance by 1; M_cpd03423_c0 exceeds the tolerance by 1; M_cpd11537_c0 exceeds the tolerance by 1; M_cpd15269_e0 exceeds the tolerance by 1; M_cpd11541_c0 exceeds the tolerance by 1; M_cpd11528_c0 exceeds the tolerance by 1; M_cpd03494_c0 exceeds the tolerance by 1; M_cpd15358_c0 exceeds the tolerance by 1; M_cpd02295_c0 exceeds the tolerance by 1; M_cpd11512_c0 exceeds the tolerance by 1; M_cpd00111_c0 exceeds the tolerance by 1; M_cpd03422_e0 exceeds the tolerance by 1; M_cpd02968_c0 exceeds the tolerance by 1; M_cpd00658_c0 exceeds the tolerance by 1; M_cpd01080_e0 exceeds the tolerance by 1; M_cpd00111_e0 exceeds the tolerance by 1; M_cpd11500_c0 exceeds the tolerance by 1; M_cpd03847_e0 exceeds the tolerance by 1; M_cpd00869_c0 exceeds the tolerance by 1; M_cpd11295_c0 exceeds the tolerance by 1; M_cpd11217_c0 exceeds the tolerance by 1; M_cpd00070_c0 exceeds the tolerance by 1; M_cpd00085_c0 exceeds the tolerance by 1; M_cpd00506_c0 exceeds the tolerance by 1; M_cpd00013_e0 exceeds the tolerance by 1; M_cpd02591_c0 exceeds the tolerance by 1; M_cpd16335_c0 exceeds the tolerance by 1; M_cpd00460_c0 exceeds the tolerance by 1; M_cpd03285_c0 exceeds the tolerance by 1; M_cpd08367_c0 exceeds the tolerance by 1; M_cpd00607_c0 exceeds the tolerance by 1; M_cpd01502_c0 exceeds the tolerance by 1; M_cpd03593_c0 exceeds the tolerance by 1; M_cpd00029_e0 exceeds the tolerance by 1; M_cpd00278_c0 exceeds the tolerance by 1; M_cpd11175_c0 exceeds the tolerance by 1; M_cpd00035_e0 exceeds the tolerance by 1; M_cpd00117_e0 exceeds the tolerance by 1; M_cpd00528_e0 exceeds the tolerance by 1; M_cpd00239_e0 exceeds the tolerance by 1; M_cpd15886_c0 exceeds the tolerance by 1; M_cpd15833_c0 exceeds the tolerance by 1; M_cpd02483_c0 exceeds the tolerance by 1; M_cpd15888_c0 exceeds the tolerance by 1; M_cpd15901_c0 exceeds the tolerance by 1; M_cpd15831_c0 exceeds the tolerance by 1; M_cpd15882_c0 exceeds the tolerance by 1; M_cpd15908_c0 exceeds the tolerance by 1; M_cpd15900_c0 exceeds the tolerance by 1; M_cpd15832_c0 exceeds the tolerance by 1; M_cpd15883_c0 exceeds the tolerance by 1; M_cpd15909_c0 exceeds the tolerance by 1; M_cpd16398_c0 exceeds the tolerance by 1; M_cpd15829_c0 exceeds the tolerance by 1; M_cpd15827_c0 exceeds the tolerance by 1; M_cpd15828_c0 exceeds the tolerance by 1; M_cpd15850_c0 exceeds the tolerance by 1; M_cpd03521_c0 exceeds the tolerance by 1; M_cpd02961_c0 exceeds the tolerance by 1; M_cpd00954_c0 exceeds the tolerance by 1; M_cpd00229_c0 exceeds the tolerance by 1; M_cpd02920_c0 exceeds the tolerance by 1; M_cpd00443_c0 exceeds the tolerance by 1; M_cpd15830_c0 exceeds the tolerance by 1; M_cpd15851_c0 exceeds the tolerance by 1; M_cpd02041_c0 exceeds the tolerance by 1; M_cpd15853_c0 exceeds the tolerance by 1; M_2ATDLH6U_c0 exceeds the tolerance by 1; M_cpd17158_c0 exceeds the tolerance by 1; M_2A3DHQ_c0 exceeds the tolerance by 1; M_4A3DHS_c0 exceeds the tolerance by 1; M_4ASKM_c0 exceeds the tolerance by 1; M_4A3H15D1C_c0 exceeds the tolerance by 1; M_cpd00139_c0 exceeds the tolerance by 1; M_cpd00040_c0 exceeds the tolerance by 1; M_cpd00374_c0 exceeds the tolerance by 1; M_GGT_c0 exceeds the tolerance by 1; M_4HM2FCP_c0 exceeds the tolerance by 1; M_5AM3FMP_c0 exceeds the tolerance by 1; M_5AM3FMPP_c0 exceeds the tolerance by 1; M_AEPM2FMA_c0 exceeds the tolerance by 1; M_cpd00244_c0 exceeds the tolerance by 1; M_cpd15873_c0 exceeds the tolerance by 1; M_cpd15874_c0 exceeds the tolerance by 1; M_cpd15875_c0 exceeds the tolerance by 1; M_cpd15905_c0 exceeds the tolerance by 1; M_cpd03425_c0 exceeds the tolerance by 1; M_cpd00244_e0 exceeds the tolerance by 1; M_cpd00180_c0 exceeds the tolerance by 1; M_cpd15839_c0 exceeds the tolerance by 1; M_cpd00159_c0 exceeds the tolerance by 1; M_cpd15809_c0 exceeds the tolerance by 1; M_cpd15889_c0 exceeds the tolerance by 1; M_cpd15864_c0 exceeds the tolerance by 1; M_cpd15865_c0 exceeds the tolerance by 1; M_cpd15868_c0 exceeds the tolerance by 1; M_cpd00204_c0 exceeds the tolerance by 1; M_cpd00204_e0 exceeds the tolerance by 1; M_cpd00131_e0 exceeds the tolerance by 1; M_cpd00131_c0 exceeds the tolerance by 1; M_cpd03523_c0 exceeds the tolerance by 1; M_cpd03732_c0 exceeds the tolerance by 1; M_cpd02782_c0 exceeds the tolerance by 1; M_U2A2D3OG_c0 exceeds the tolerance by 1; M_U2A3A23DDG_c0 exceeds the tolerance by 1; M_U23DA23DDG_c0 exceeds the tolerance by 1; M_U23DA23DDM_c0 exceeds the tolerance by 1; M_U3A23DAM_c0 exceeds the tolerance by 1; M_N2A24D5MH4U15P_c0 exceeds the tolerance by 1; M_N2A24D5MAEH5U15P_c0 exceeds the tolerance by 1; M_LIP4SUG_c0 exceeds the tolerance by 1; M_LIP4SUGT_c0 exceeds the tolerance by 1; M_LIP1SUG_c0 exceeds the tolerance by 1; M_LIP2SUG_c0 exceeds the tolerance by 1; M_LIP3SUG_c0 exceeds the tolerance by 1; M_LIP4SUGT_e0 exceeds the tolerance by 1; M_FLGN_e0 exceeds the tolerance by 1; M_ARCN_e0 exceeds the tolerance by 1; M_MEMLIP_c0 exceeds the tolerance by 1; M_cpd00703_c0 exceeds the tolerance by 1; M_cpd00703_e0 exceeds the tolerance by 1; M_cpd00489_e0 exceeds the tolerance by 1; M_cpd00489_c0 exceeds the tolerance by 1; M_cpd00430_e0 exceeds the tolerance by 1; M_cpd00430_c0 exceeds the tolerance by 1; M_cpd03165_c0 exceeds the tolerance by 1; M_cpd00452_c0 exceeds the tolerance by 1; M_cpd00802_c0 exceeds the tolerance by 1; M_cpd00428_c0 exceeds the tolerance by 1; M_cpd00055_c0 exceeds the tolerance by 1; M_cpd15573_c0 exceeds the tolerance by 1; M_cpd15565_c0 exceeds the tolerance by 1; M_cpd16442_c0 exceeds the tolerance by 1; M_cpd15563_c0 exceeds the tolerance by 1; M_cpd16579_c0 exceeds the tolerance by 1; M_cpd03387_c0 exceeds the tolerance by 1; M_cpd03396_c0 exceeds the tolerance by 1; M_cpd03396_e0 exceeds the tolerance by 1; M_cpd00207_c0 exceeds the tolerance by 1; M_cpd17039_c0 exceeds the tolerance by 1; M_cpd02797_c0 exceeds the tolerance by 1; M_cpd02824_c0 exceeds the tolerance by 1; M_cpd18042_c0 exceeds the tolerance by 1; M_ARCHLS_c0 exceeds the tolerance by 1; M_SATARCHL_c0 exceeds the tolerance by 1; M_SATARCHLS_c0 exceeds the tolerance by 1; M_cpd11640_e0 exceeds the tolerance by 1; M_cpd01024_e0 exceeds the tolerance by 1
```

**2 cases**

```text
BIOMD0000000141: SimulationFailure: libopencor: SimulationError: run: Task | CVODE: at t = 84.2 and h = 4.83e-153, the corrector convergence test failed repeatedly or with |h| = hmin.
BIOMD0000000158: SimulationFailure: libopencor: SimulationError: run: Task | CVODE: at t = 16.5 and h = 3.59e-98, the corrector convergence test failed repeatedly or with |h| = hmin.
```

**2 cases**

```text
BIOMD0000000540: SimulationFailure: libopencor: SimulationError: run: Task | CVODE: at t = 15.2, mxstep steps taken before reaching tout.
BIOMD0000000541: SimulationFailure: libopencor: SimulationError: run: Task | CVODE: at t = 15.2, mxstep steps taken before reaching tout.
```

### roundtrip

100 of 1060 cases fail.

**96 cases, numerical mismatch**

```text
BIOMD0000000001: B exceeds the tolerance by 6.44e-06; DLL exceeds the tolerance by 1.5e-05; D exceeds the tolerance by 9e-06; ILL exceeds the tolerance by 4.91e-06
BIOMD0000000007: Mass exceeds the tolerance by 0.402
BIOMD0000000056: BUB2 exceeds the tolerance by 0.799; BUD exceeds the tolerance by 0.275; C2 exceeds the tolerance by 0.101; C2P exceeds the tolerance by 0.0267; C5 exceeds the tolerance by 0.0222; C5P exceeds the tolerance by 0.00281; CDC14 exceeds the tolerance by 0.361; CDC15 exceeds the tolerance by 0.517; CDC15i exceeds the tolerance by 0.518; CDC20 exceeds the tolerance by 0.313; CDC20i exceeds the tolerance by 0.326; CDC6 exceeds the tolerance by 0.0177; CDC6P exceeds the tolerance by 0.00504; CDC6T exceeds the tolerance by 0.101; CDH1 exceeds the tolerance by 0.451; CDH1i exceeds the tolerance by 0.451; CKIT exceeds the tolerance by 0.202; CLB2 exceeds the tolerance by 0.48; CLB2T exceeds the tolerance by 0.451; CLB5 exceeds the tolerance by 0.18; CLB5T exceeds the tolerance by 0.18; CLN2 exceeds the tolerance by 0.182; ESP1 exceeds the tolerance by 0.142; F2 exceeds the tolerance by 0.111; F2P exceeds the tolerance by 0.0221; F5 exceeds the tolerance by 2.15e-05; F5P exceeds the tolerance by 7.28e-06; IE exceeds the tolerance by 0.158; IEP exceeds the tolerance by 0.158; LTE1 exceeds the tolerance by 0.899; MAD2 exceeds the tolerance by 7.98; MCM1 exceeds the tolerance by 0.232; NET1 exceeds the tolerance by 0.24; NET1P exceeds the tolerance by 0.461; ORI exceeds the tolerance by 6.27; PDS1 exceeds the tolerance by 0.775; PE exceeds the tolerance by 0.141; PPX exceeds the tolerance by 0.242; RENT exceeds the tolerance by 0.756; RENTP exceeds the tolerance by 0.395; SBF exceeds the tolerance by 0.262; SIC1 exceeds the tolerance by 0.00301; SIC1P exceeds the tolerance by 0.00343; SIC1T exceeds the tolerance by 0.101; SPN exceeds the tolerance by 0.0447; SWI5 exceeds the tolerance by 0.141; SWI5P exceeds the tolerance by 0.136; TEM1GDP exceeds the tolerance by 0.896; TEM1GTP exceeds the tolerance by 0.895; Visbf exceeds the tolerance by 3.84; Vppc1 exceeds the tolerance by 1.44; Vppf6 exceeds the tolerance by 1.44; Vaiep exceeds the tolerance by 0.048; Vacdh exceeds the tolerance by 0.289; Vicdh exceeds the tolerance by 0.159; Vkpnet exceeds the tolerance by 0.808; Vppnet exceeds the tolerance by 0.725; Vasbf exceeds the tolerance by 0.123; Vd2c1 exceeds the tolerance by 0.232; Vd2f6 exceeds the tolerance by 0.28; Vkpc1 exceeds the tolerance by 1.85; Vkpf6 exceeds the tolerance by 2.04; Vdb2 exceeds the tolerance by 0.19; Vdb5 exceeds the tolerance by 0.05; Vdpds exceeds the tolerance by 0.0626; Vdppx exceeds the tolerance by 0.305
BIOMD0000000077: H exceeds the tolerance by 0.989; HR exceeds the tolerance by 0.00136; R exceeds the tolerance by 0.00713; HRRH exceeds the tolerance by 0.000975; E exceeds the tolerance by 0.00191; GQ exceeds the tolerance by 0.00181; IP3 exceeds the tolerance by 3.83e+03; CHO exceeds the tolerance by 0.264
BIOMD0000000081: KCNQsites_M exceeds the tolerance by 20.2; PIP2_M exceeds the tolerance by 4.68e+03; oxoM_EX exceeds the tolerance by 9.99; GGTPMg_M exceeds the tolerance by 25.7; GDP_C exceeds the tolerance by 0.234; ip3_C exceeds the tolerance by 2.47; G_M exceeds the tolerance by 1.11; GGTP_M exceeds the tolerance by 7.59; PIP_M exceeds the tolerance by 318; PIP2xKCNQ_M exceeds the tolerance by 20.2; GGDP_M exceeds the tolerance by 33.9; I_KCNQ exceeds the tolerance by 0.778; fGactive exceeds the tolerance by 0.128; OxoSat exceeds the tolerance by 0.555; Gactive exceeds the tolerance by 25.7
BIOMD0000000095: cLc exceeds the tolerance by 28.3; cLm exceeds the tolerance by 4.24; cLn exceeds the tolerance by 29.1; cP7c exceeds the tolerance by 81.7; cP7m exceeds the tolerance by 6.79; cP7n exceeds the tolerance by 8.66; cP9c exceeds the tolerance by 22.1; cP9m exceeds the tolerance by 5.34; cP9n exceeds the tolerance by 13.9; cPn exceeds the tolerance by 0.857; cTc exceeds the tolerance by 0.229; cTm exceeds the tolerance by 1.37; cTn exceeds the tolerance by 6.4; cXc exceeds the tolerance by 13.6; cXm exceeds the tolerance by 5.69; cXn exceeds the tolerance by 33.5; cYc exceeds the tolerance by 23.5; cYm exceeds the tolerance by 4.01; cYn exceeds the tolerance by 3.57
BIOMD0000000096: cLc exceeds the tolerance by 1.09; cLm exceeds the tolerance by 2.62; cLn exceeds the tolerance by 3.59; cP7c exceeds the tolerance by 0.506; cP7m exceeds the tolerance by 0.95; cP7n exceeds the tolerance by 25.8; cP9c exceeds the tolerance by 30.4; cP9m exceeds the tolerance by 0.899; cP9n exceeds the tolerance by 46.1; cPn exceeds the tolerance by 0.847; cTc exceeds the tolerance by 8.07; cTm exceeds the tolerance by 4.92; cTn exceeds the tolerance by 7; cXc exceeds the tolerance by 2.37; cXm exceeds the tolerance by 0.445; cXn exceeds the tolerance by 15.1; cYc exceeds the tolerance by 32; cYm exceeds the tolerance by 1.12; cYn exceeds the tolerance by 11.4
BIOMD0000000097: cLc exceeds the tolerance by 0.611; cLm exceeds the tolerance by 4.27; cLn exceeds the tolerance by 3.58; cP7c exceeds the tolerance by 2.39; cP7m exceeds the tolerance by 1.48; cP7n exceeds the tolerance by 105; cP9c exceeds the tolerance by 5.98; cP9m exceeds the tolerance by 1.36; cP9n exceeds the tolerance by 5.65; cPn exceeds the tolerance by 0.854; cTc exceeds the tolerance by 1.49; cTm exceeds the tolerance by 4.19; cTn exceeds the tolerance by 8.5; cXc exceeds the tolerance by 4.11; cXm exceeds the tolerance by 1.7; cXn exceeds the tolerance by 25.7; cYc exceeds the tolerance by 15.7; cYm exceeds the tolerance by 1.84; cYn exceeds the tolerance by 20.1
BIOMD0000000104: species_0 exceeds the tolerance by 0.115; species_1 exceeds the tolerance by 1; species_2 exceeds the tolerance by 0.6; species_3 exceeds the tolerance by 0.599; species_4 exceeds the tolerance by 0.999
BIOMD0000000117: z exceeds the tolerance by 0.569; y exceeds the tolerance by 1.56; beta exceeds the tolerance by 0.785
BIOMD0000000120: lck_inactive exceeds the tolerance by 5.37; lck_active exceeds the tolerance by 5.58; phosphatase_inactive exceeds the tolerance by 0.707; phosphatase_active exceeds the tolerance by 0.706; lck_total exceeds the tolerance by 5.84
BIOMD0000000121: c3 exceeds the tolerance by 0.556; c2 exceeds the tolerance by 0.107; c1 exceeds the tolerance by 0.21; o exceeds the tolerance by 0.0531; i exceeds the tolerance by 0.195; ik exceeds the tolerance by 0.2; a exceeds the tolerance by 0.0254; b exceeds the tolerance by 0.00782; aa exceeds the tolerance by 0.00791; bb exceeds the tolerance by 0.00402; ai exceeds the tolerance by 0.317; bi exceeds the tolerance by 0.0223; u exceeds the tolerance by 0.0051
BIOMD0000000122: Ca_Nuc exceeds the tolerance by 0.9; Ca_Cyt exceeds the tolerance by 0.9; NFAT_Nuc exceeds the tolerance by 0.000738; Act_C_Nuc exceeds the tolerance by 0.0241; NFAT_Pi_Nuc exceeds the tolerance by 0.000137; NFAT_Act_C_Nuc exceeds the tolerance by 0.0131; NFAT_Pi_Act_C_Nuc exceeds the tolerance by 3.81e-05; Inact_C_Nuc exceeds the tolerance by 0.0256; NFAT_Cyt exceeds the tolerance by 5.89e-05; Act_C_Cyt exceeds the tolerance by 0.00335; NFAT_Pi_Cyt exceeds the tolerance by 0.00525; NFAT_Act_C_Cyt exceeds the tolerance by 0.000262; NFAT_Pi_Act_C_Cyt exceeds the tolerance by 0.000268; Inact_C_Cyt exceeds the tolerance by 0.00609
BIOMD0000000125: x1 exceeds the tolerance by 2; x2 exceeds the tolerance by 4; y2 exceeds the tolerance by 2; x0 exceeds the tolerance by 1
BIOMD0000000126: C1 exceeds the tolerance by 0.287; C2 exceeds the tolerance by 0.137; C3 exceeds the tolerance by 0.914; IC3 exceeds the tolerance by 0.573; IC2 exceeds the tolerance by 0.2; IM1 exceeds the tolerance by 0.279; IM2 exceeds the tolerance by 0.000159; O exceeds the tolerance by 0.15; IF exceeds the tolerance by 0.658; a11 exceeds the tolerance by 4.18; a12 exceeds the tolerance by 3.48; a13 exceeds the tolerance by 2.39; a2 exceeds the tolerance by 2.72; a3 exceeds the tolerance by 0.0123; b3 exceeds the tolerance by 0.000991; a4 exceeds the tolerance by 0.0272; b4 exceeds the tolerance by 0.0123; a5 exceeds the tolerance by 2.76e-05; b5 exceeds the tolerance by 0.000245; Ina exceeds the tolerance by 0.315; b11 exceeds the tolerance by 9.02; b12 exceeds the tolerance by 12; b13 exceeds the tolerance by 16.9; b2 exceeds the tolerance by 0.00952
BIOMD0000000127: v exceeds the tolerance by 40.4; U exceeds the tolerance by 14.4
BIOMD0000000129: v exceeds the tolerance by 52.5; u exceeds the tolerance by 5.95
BIOMD0000000130: v exceeds the tolerance by 45.4; u exceeds the tolerance by 5.61
BIOMD0000000131: v exceeds the tolerance by 50; u exceeds the tolerance by 4.19
BIOMD0000000132: v exceeds the tolerance by 29.7; u exceeds the tolerance by 4.69
BIOMD0000000133: u exceeds the tolerance by 0.687; v exceeds the tolerance by 3.72
BIOMD0000000134: v exceeds the tolerance by 37.2; u exceeds the tolerance by 6.42
BIOMD0000000135: u exceeds the tolerance by 0.819; v exceeds the tolerance by 28.2
BIOMD0000000136: v exceeds the tolerance by 23.6; u exceeds the tolerance by 4.46
BIOMD0000000144: MPFc exceeds the tolerance by 0.0287; preMPFc exceeds the tolerance by 8.2e-05; StgPc exceeds the tolerance by 0.00384; Wee1c exceeds the tolerance by 0.000839; Wee1Pc exceeds the tolerance by 0.00532; Stgm exceeds the tolerance by 0.0984; Xp exceeds the tolerance by 0.0402; Stgc exceeds the tolerance by 0.000863; Xm exceeds the tolerance by 2.32; MPFn exceeds the tolerance by 0.628; preMPFn exceeds the tolerance by 0.199; Wee1Pn exceeds the tolerance by 1.59; Wee1n exceeds the tolerance by 1.05; StgPn exceeds the tolerance by 2.16; Stgn exceeds the tolerance by 1.22; FZYa exceeds the tolerance by 0.991; IEa_1 exceeds the tolerance by 0.748; N exceeds the tolerance by 208; CycBT exceeds the tolerance by 0.0339; StgPT exceeds the tolerance by 0.0119
BIOMD0000000148: z exceeds the tolerance by 13.7
BIOMD0000000234: Effect exceeds the tolerance by 0.754; Ce exceeds the tolerance by 3.24e+04; TumorSize exceeds the tolerance by 4.33
BIOMD0000000235: PROTEIN_E_Apobec exceeds the tolerance by 0.000282; PROTEIN_E_Bra exceeds the tolerance by 0.157; PROTEIN_E_Endo16 exceeds the tolerance by 0.125; PROTEIN_E_Eve exceeds the tolerance by 0.000253; PROTEIN_E_Gcad exceeds the tolerance by 560; PROTEIN_E_Hox exceeds the tolerance by 0.0954; PROTEIN_E_Lim exceeds the tolerance by 0.157; PROTEIN_E_Notch exceeds the tolerance by 13.8; PROTEIN_E_Notch2 exceeds the tolerance by 0.849; PROTEIN_E_OrCt exceeds the tolerance by 0.000282; PROTEIN_E_Otx exceeds the tolerance by 560; PROTEIN_E_Pmar1 exceeds the tolerance by 0.178; PROTEIN_E_SoxB1 exceeds the tolerance by 553; PROTEIN_E_SuH exceeds the tolerance by 8.89; PROTEIN_E_SuHN exceeds the tolerance by 38.5; PROTEIN_E_UMR exceeds the tolerance by 48.8; PROTEIN_E_UVAOtx exceeds the tolerance by 38.7; PROTEIN_E_VEGF exceeds the tolerance by 15.1; PROTEIN_E_cB exceeds the tolerance by 375; PROTEIN_M_Apobec exceeds the tolerance by 0.00127; PROTEIN_M_Blimp1 exceeds the tolerance by 0.0011; PROTEIN_M_Bra exceeds the tolerance by 0.262; PROTEIN_M_Delta exceeds the tolerance by 0.323; PROTEIN_M_Delta2 exceeds the tolerance by 0.108; PROTEIN_M_Endo16 exceeds the tolerance by 0.225; PROTEIN_M_Eve exceeds the tolerance by 0.000573; PROTEIN_M_FoxA exceeds the tolerance by 0.00358; PROTEIN_M_Gcad exceeds the tolerance by 560; PROTEIN_M_Gcm exceeds the tolerance by 0.000958; PROTEIN_M_Hox exceeds the tolerance by 0.188; PROTEIN_M_Lim exceeds the tolerance by 0.262; PROTEIN_M_Notch exceeds the tolerance by 538; PROTEIN_M_Notch2 exceeds the tolerance by 1.46; PROTEIN_M_Nrl exceeds the tolerance by 0.00142; PROTEIN_M_OrCt exceeds the tolerance by 0.00127; PROTEIN_M_Otx exceeds the tolerance by 560; PROTEIN_M_Pmar1 exceeds the tolerance by 0.278; PROTEIN_M_SoxB1 exceeds the tolerance by 559; PROTEIN_M_SuH exceeds the tolerance by 80.5; PROTEIN_M_SuHN exceeds the tolerance by 928; PROTEIN_M_UMADelta exceeds the tolerance by 36.6; PROTEIN_M_UMANrl exceeds the tolerance by 15; PROTEIN_M_UMR exceeds the tolerance by 48.8; PROTEIN_M_UbiqSoxB1 exceeds the tolerance by 560; PROTEIN_M_cB exceeds the tolerance by 375; PROTEIN_P_Alx1 exceeds the tolerance by 36.4; PROTEIN_P_CyP exceeds the tolerance by 1.56; PROTEIN_P_Delta exceeds the tolerance by 12.6; PROTEIN_P_Delta2 exceeds the tolerance by 30.3; PROTEIN_P_Dri exceeds the tolerance by 1.52; PROTEIN_P_Erg exceeds the tolerance by 1.38; PROTEIN_P_Ets1 exceeds the tolerance by 559; PROTEIN_P_Ficolin exceeds the tolerance by 1.96; PROTEIN_P_FoxB exceeds the tolerance by 0.0432; PROTEIN_P_FoxO exceeds the tolerance by 1.45; PROTEIN_P_GataC exceeds the tolerance by 0.0408; PROTEIN_P_Gcad exceeds the tolerance by 560; PROTEIN_P_HesC exceeds the tolerance by 0.912; PROTEIN_P_Hex exceeds the tolerance by 1.5; PROTEIN_P_Hnf6 exceeds the tolerance by 33.8; PROTEIN_P_L1 exceeds the tolerance by 29.2; PROTEIN_P_Msp130 exceeds the tolerance by 1.17; PROTEIN_P_MspL exceeds the tolerance by 1.36; PROTEIN_P_Nrl exceeds the tolerance by 0.0522; PROTEIN_P_Sm27 exceeds the tolerance by 1.23; PROTEIN_P_Sm50 exceeds the tolerance by 1.18; PROTEIN_P_SoxC exceeds the tolerance by 2.74; PROTEIN_P_TBr exceeds the tolerance by 1.63; PROTEIN_P_Tel exceeds the tolerance by 0.515; PROTEIN_P_Tgif exceeds the tolerance by 1.45; PROTEIN_P_UbiqAlx1 exceeds the tolerance by 560; PROTEIN_P_UbiqES exceeds the tolerance by 560; PROTEIN_P_UbiqEts1 exceeds the tolerance by 560; PROTEIN_P_UbiqHesC exceeds the tolerance by 560; PROTEIN_P_UbiqHnf6 exceeds the tolerance by 560; PROTEIN_P_UbiqSoxC exceeds the tolerance by 560; PROTEIN_P_UbiqTel exceeds the tolerance by 560; PROTEIN_P_VEGFR exceeds the tolerance by 6.36; PROTEIN_P_VEGFSignal exceeds the tolerance by 16.4; PROTEIN_P_cB exceeds the tolerance by 375; mRNA_E_Apobec exceeds the tolerance by 4.28e-05; mRNA_E_Bra exceeds the tolerance by 0.0243; mRNA_E_Endo16 exceeds the tolerance by 0.0194; mRNA_E_Eve exceeds the tolerance by 3.84e-05; mRNA_E_Gcad exceeds the tolerance by 84; mRNA_E_Hox exceeds the tolerance by 0.015; mRNA_E_Lim exceeds the tolerance by 0.0243; mRNA_E_Notch exceeds the tolerance by 6.64; mRNA_E_OrCt exceeds the tolerance by 4.28e-05; mRNA_E_Otx exceeds the tolerance by 84; mRNA_E_Pmar1 exceeds the tolerance by 0.0274; mRNA_E_SoxB1 exceeds the tolerance by 83; mRNA_E_SuH exceeds the tolerance by 3.94; mRNA_E_UMR exceeds the tolerance by 11.8; mRNA_E_UVAOtx exceeds the tolerance by 9.13; mRNA_E_VEGF exceeds the tolerance by 3.94; mRNA_E_cB exceeds the tolerance by 84; mRNA_M_Apobec exceeds the tolerance by 0.00019; mRNA_M_Blimp1 exceeds the tolerance by 0.000166; mRNA_M_Bra exceeds the tolerance by 0.0394; mRNA_M_Delta exceeds the tolerance by 0.074; mRNA_M_Endo16 exceeds the tolerance by 0.0338; mRNA_M_Eve exceeds the tolerance by 8.57e-05; mRNA_M_FoxA exceeds the tolerance by 0.000537; mRNA_M_Gcad exceeds the tolerance by 84; mRNA_M_Gcm exceeds the tolerance by 0.000148; mRNA_M_Hox exceeds the tolerance by 0.0282; mRNA_M_Lim exceeds the tolerance by 0.0394; mRNA_M_Notch exceeds the tolerance by 84; mRNA_M_Nrl exceeds the tolerance by 0.000215; mRNA_M_OrCt exceeds the tolerance by 0.00019; mRNA_M_Otx exceeds the tolerance by 84.1; mRNA_M_Pmar1 exceeds the tolerance by 0.0418; mRNA_M_SoxB1 exceeds the tolerance by 83.8; mRNA_M_SuH exceeds the tolerance by 13.6; mRNA_M_UMADelta exceeds the tolerance by 8.03; mRNA_M_UMANrl exceeds the tolerance by 3.94; mRNA_M_UMR exceeds the tolerance by 11.8; mRNA_M_UbiqSoxB1 exceeds the tolerance by 84; mRNA_M_cB exceeds the tolerance by 84; mRNA_P_Alx1 exceeds the tolerance by 5.59; mRNA_P_CyP exceeds the tolerance by 0.235; mRNA_P_Delta exceeds the tolerance by 2.81; mRNA_P_Dri exceeds the tolerance by 0.229; mRNA_P_Erg exceeds the tolerance by 0.21; mRNA_P_Ets1 exceeds the tolerance by 84.3; mRNA_P_Ficolin exceeds the tolerance by 0.328; mRNA_P_FoxB exceeds the tolerance by 0.00663; mRNA_P_FoxO exceeds the tolerance by 0.218; mRNA_P_GataC exceeds the tolerance by 0.0085; mRNA_P_Gcad exceeds the tolerance by 84; mRNA_P_HesC exceeds the tolerance by 0.14; mRNA_P_Hex exceeds the tolerance by 0.226; mRNA_P_Hnf6 exceeds the tolerance by 5.7; mRNA_P_L1 exceeds the tolerance by 6.64; mRNA_P_Msp130 exceeds the tolerance by 0.179; mRNA_P_MspL exceeds the tolerance by 0.205; mRNA_P_Nrl exceeds the tolerance by 0.00857; mRNA_P_Sm27 exceeds the tolerance by 0.249; mRNA_P_Sm50 exceeds the tolerance by 0.241; mRNA_P_SoxC exceeds the tolerance by 0.463; mRNA_P_TBr exceeds the tolerance by 0.26; mRNA_P_Tel exceeds the tolerance by 0.105; mRNA_P_Tgif exceeds the tolerance by 0.218; mRNA_P_UbiqAlx1 exceeds the tolerance by 84; mRNA_P_UbiqES exceeds the tolerance by 84; mRNA_P_UbiqEts1 exceeds the tolerance by 84; mRNA_P_UbiqHesC exceeds the tolerance by 84; mRNA_P_UbiqHnf6 exceeds the tolerance by 84; mRNA_P_UbiqSoxC exceeds the tolerance by 84; mRNA_P_UbiqTel exceeds the tolerance by 84; mRNA_P_VEGFR exceeds the tolerance by 0.214; mRNA_P_cB exceeds the tolerance by 84
BIOMD0000000241: X_gut exceeds the tolerance by 4.08e-05; C_p exceeds the tolerance by 5.08; C_per exceeds the tolerance by 7.34; C_e exceeds the tolerance by 5.42; C_t exceeds the tolerance by 5.24; E exceeds the tolerance by 6.28
BIOMD0000000256: PC3 exceeds the tolerance by 0.000629; XIAP exceeds the tolerance by 0.00015; C3 exceeds the tolerance by 0.0113; XIAP_C3 exceeds the tolerance by 0.00126; BIR12 exceeds the tolerance by 0.00442; BIR12_C3 exceeds the tolerance by 0.038; BIR3R exceeds the tolerance by 0.00252; BIR3R_p2frag exceeds the tolerance by 0.00994; XIAP_2SMAC exceeds the tolerance by 0.000538; BIR12_SMAC exceeds the tolerance by 0.00035; BIR3R_SMAC exceeds the tolerance by 1.11e-05; SMAC exceeds the tolerance by 0.003; Substrate exceeds the tolerance by 1.45e-05; SMAC_norm exceeds the tolerance by 0.0476; XIAP_2SMAC_norm exceeds the tolerance by 0.00855; C9norm exceeds the tolerance by 4.22e-06; C3norm exceeds the tolerance by 0.094; PC3norm exceeds the tolerance by 0.00525; XIAP_norm exceeds the tolerance by 0.0024; XIAP_C3_norm exceeds the tolerance by 0.02; XIAP_C9_norm exceeds the tolerance by 1.31e-06; XIAP_p2frag_norm exceeds the tolerance by 2.71e-06; BIR12_norm exceeds the tolerance by 0.0702; BIR3R_norm exceeds the tolerance by 0.04; BIR12_C3_norm exceeds the tolerance by 0.604; BIR3R_C9_norm exceeds the tolerance by 4.46e-06; BIR3R_p2frag_norm exceeds the tolerance by 0.158
BIOMD0000000265: CDc20 exceeds the tolerance by 0.697; CDh1 exceeds the tolerance by 0.999; CYCA exceeds the tolerance by 19.3; CYCB exceeds the tolerance by 3.29; CYCD exceeds the tolerance by 0.437; CYCE exceeds the tolerance by 1.14; var2 exceeds the tolerance by 4.37; var5 exceeds the tolerance by 4.32; GM exceeds the tolerance by 181; var1 exceeds the tolerance by 5.21; CDc20T exceeds the tolerance by 3.04; MASS exceeds the tolerance by 225; P27 exceeds the tolerance by 1.07; CA exceeds the tolerance by 0.487; CD exceeds the tolerance by 0.436; CE exceeds the tolerance by 0.762; var3 exceeds the tolerance by 4.6; var6 exceeds the tolerance by 2.47; IEP exceeds the tolerance by 0.799; var4 exceeds the tolerance by 0.481; PP1A exceeds the tolerance by 0.833; V2 exceeds the tolerance by 20.6; V4 exceeds the tolerance by 316; V6 exceeds the tolerance by 1.09e+03; V8 exceeds the tolerance by 389; CYCET exceeds the tolerance by 1.3; CYCAT exceeds the tolerance by 19.3; P27T exceeds the tolerance by 1.8
BIOMD0000000281: GLU exceeds the tolerance by 0.003; ENZ exceeds the tolerance by 8.62e-06; ENG exceeds the tolerance by 8.61e-06; TP1 exceeds the tolerance by 0.000249; ADP exceeds the tolerance by 0.0001; GLP exceeds the tolerance by 4.5e-05; ETZ exceeds the tolerance by 1.94e-06; ETG exceeds the tolerance by 1.95e-06; GPP exceeds the tolerance by 8.49e-05; DHA exceeds the tolerance by 0.00016; DPN exceeds the tolerance by 8.35e-07; DPH exceeds the tolerance by 1.36e-05; PID exceeds the tolerance by 0.000498; DGA exceeds the tolerance by 4.93e-05; PGA exceeds the tolerance by 5.02e-05; PYR exceeds the tolerance by 2.98e-05; LAC exceeds the tolerance by 0.00015; DIN exceeds the tolerance by 2.64e-05; DIH exceeds the tolerance by 2.64e-05; XI exceeds the tolerance by 4.09e-05; XSI exceeds the tolerance by 6.14e-06; OXY exceeds the tolerance by 7.45e-05; XSP exceeds the tolerance by 4.62e-05; TP2 exceeds the tolerance by 0.000245; AGP exceeds the tolerance by 7.82e-05; MOD exceeds the tolerance by 1.22e-05; MOB exceeds the tolerance by 4.89e-06; MOX exceeds the tolerance by 6.34e-06; GLU_0 exceeds the tolerance by 0.999; ENZ_0 exceeds the tolerance by 0.943; ENG_0 exceeds the tolerance by 0.942; TP1_0 exceeds the tolerance by 0.167; ADP_0 exceeds the tolerance by 0.101; GLP_0 exceeds the tolerance by 0.046; ETZ_0 exceeds the tolerance by 0.294; ETG_0 exceeds the tolerance by 0.295; GPP_0 exceeds the tolerance by 0.0859; GAP_0 exceeds the tolerance by 0.00194; DHA_0 exceeds the tolerance by 0.124; DPN_0 exceeds the tolerance by 0.00734; DPH_0 exceeds the tolerance by 0.0729; PID_0 exceeds the tolerance by 0.0998; DGA_0 exceeds the tolerance by 0.251; PGA_0 exceeds the tolerance by 0.256; PYR_0 exceeds the tolerance by 0.0154; LAC_0 exceeds the tolerance by 0.126; DIN_0 exceeds the tolerance by 0.391; DIH_0 exceeds the tolerance by 0.391; XI_0 exceeds the tolerance by 0.698; XSI_0 exceeds the tolerance by 0.119; OXY_0 exceeds the tolerance by 0.151; XSP_0 exceeds the tolerance by 0.786; TP2_0 exceeds the tolerance by 0.164; PUE_0 exceeds the tolerance by 0.245; AGP_0 exceeds the tolerance by 0.0609; MOD_0 exceeds the tolerance by 0.264; MOB_0 exceeds the tolerance by 0.0589; MOX_0 exceeds the tolerance by 0.147
BIOMD0000000285: PolyQ exceeds the tolerance by 5.72; Proteasome exceeds the tolerance by 15.1; NatP exceeds the tolerance by 181; MisP exceeds the tolerance by 38.9; MisP_Proteasome exceeds the tolerance by 0.0707; AggPolyQ1 exceeds the tolerance by 1.24; AggPolyQ2 exceeds the tolerance by 0.00154; AggPolyQ3 exceeds the tolerance by 2.79e-07; AggP_Proteasome exceeds the tolerance by 0.000306; mRFPu exceeds the tolerance by 0.743; mRFPu_Proteasome exceeds the tolerance by 11.7; PolyQ_Proteasome exceeds the tolerance by 4.37; ROS exceeds the tolerance by 0.00326; p38_P exceeds the tolerance by 0.452; p38 exceeds the tolerance by 0.352; p38death exceeds the tolerance by 1.1e-06; oligomers exceeds the tolerance by 1.24
BIOMD0000000297: Trim exceeds the tolerance by 0.047; Clb exceeds the tolerance by 0.117; Sic exceeds the tolerance by 0.00128; PTrim exceeds the tolerance by 0.0673; PClb exceeds the tolerance by 0.0687; SBF exceeds the tolerance by 0.13; IE exceeds the tolerance by 0.00444; Cdc20a exceeds the tolerance by 1.7e-05; Cdc20 exceeds the tolerance by 0.0379; Cdh1 exceeds the tolerance by 0.00409; Swe1 exceeds the tolerance by 0.109; Swe1M exceeds the tolerance by 0.0842; PSwe1 exceeds the tolerance by 0.00183; PSwe1M exceeds the tolerance by 0.02; Mih1a exceeds the tolerance by 0.0593; Mcm exceeds the tolerance by 0.183; BE exceeds the tolerance by 0.0215; Cln exceeds the tolerance by 0.0548; kswe exceeds the tolerance by 0.218; Swe1T exceeds the tolerance by 0.00935; IEin exceeds the tolerance by 0.00345; Cdh1in exceeds the tolerance by 0.00309; Mih1 exceeds the tolerance by 0.0584; Mcmin exceeds the tolerance by 0.183; SBFin exceeds the tolerance by 0.13
BIOMD0000000301: taRNA exceeds the tolerance by 0.711; mGFPcr exceeds the tolerance by 2.17; pT7 exceeds the tolerance by 1.04; pGFP exceeds the tolerance by 34.2; ara exceeds the tolerance by 0.00969; pT3 exceeds the tolerance by 0.413; mT3cr exceeds the tolerance by 2.94
BIOMD0000000316: X exceeds the tolerance by 0.999; Y exceeds the tolerance by 0.992; Z exceeds the tolerance by 0.986
BIOMD0000000317: X exceeds the tolerance by 0.992; Z1 exceeds the tolerance by 0.998; Z2 exceeds the tolerance by 0.986; Z3 exceeds the tolerance by 0.965
BIOMD0000000318: MC exceeds the tolerance by 0.427; EF exceeds the tolerance by 1; CD exceeds the tolerance by 0.0931; CE exceeds the tolerance by 0.162; RB exceeds the tolerance by 0.447; RE exceeds the tolerance by 0.295; RP exceeds the tolerance by 0.474
BIOMD0000000327: bi exceeds the tolerance by 0.541; ci exceeds the tolerance by 57.7; ni exceeds the tolerance by 2.68; bl exceeds the tolerance by 106; cl exceeds the tolerance by 106; eb exceeds the tolerance by 0.0396; enbc exceeds the tolerance by 0.00791; ec exceeds the tolerance by 0.0439; ena exceeds the tolerance by 0.0061; kccf exceeds the tolerance by 85.3; kbcf exceeds the tolerance by 7.33; v exceeds the tolerance by 0.0535; jnbc exceeds the tolerance by 0.11; jbcftr exceeds the tolerance by 0.0469; jccftr exceeds the tolerance by 0.153; japl exceeds the tolerance by 0.00501; japbl exceeds the tolerance by 0.000643; jlum exceeds the tolerance by 0.01; jnak exceeds the tolerance by 0.0238; jnaleak exceeds the tolerance by 0.0214
BIOMD0000000337: S exceeds the tolerance by 0.0584; N1 exceeds the tolerance by 100; N2 exceeds the tolerance by 9.99
BIOMD0000000338: IIa exceeds the tolerance by 0.0117; VIII exceeds the tolerance by 0.697; VIIIa exceeds the tolerance by 0.00139; APC_PS exceeds the tolerance by 0.0923; IX exceeds the tolerance by 54; IXa exceeds the tolerance by 0.102; XIa exceeds the tolerance by 0.142; XI exceeds the tolerance by 28.4; XIIa exceeds the tolerance by 0.225; VII exceeds the tolerance by 5.79; VIIa exceeds the tolerance by 0.00189; X exceeds the tolerance by 92.5; Xa exceeds the tolerance by 0.0337; IXa_VIIIa exceeds the tolerance by 0.00067; V exceeds the tolerance by 26.3; Va exceeds the tolerance by 0.0554; II exceeds the tolerance by 118; F exceeds the tolerance by 124; Fg exceeds the tolerance by 8.56e+03; DP exceeds the tolerance by 2.34e+03; P exceeds the tolerance by 4.68; XF exceeds the tolerance by 347; XIII exceeds the tolerance by 23.6; Pg exceeds the tolerance by 1.75e+03; APC exceeds the tolerance by 0.00821; IIa_Tmod exceeds the tolerance by 0.0407; PC exceeds the tolerance by 39.5; Tmod exceeds the tolerance by 14.7; Xa_TFPI exceeds the tolerance by 0.00841; TFPI exceeds the tolerance by 0.00592; PS exceeds the tolerance by 169; VKH2 exceeds the tolerance by 0.0649; Va_Xa exceeds the tolerance by 0.000157; XII exceeds the tolerance by 375; K exceeds the tolerance by 1.42; VK exceeds the tolerance by 0.513; VKO exceeds the tolerance by 0.0665; Pk exceeds the tolerance by 433; FDP exceeds the tolerance by 137; D exceeds the tolerance by 2.2e+03; TAT exceeds the tolerance by 719; XIIIa exceeds the tolerance by 24.5; VK_p exceeds the tolerance by 0.173; Integral_Fibrin exceeds the tolerance by 1.08e+04
BIOMD0000000339: IIa exceeds the tolerance by 0.0154; VIII exceeds the tolerance by 0.638; VIIIa exceeds the tolerance by 0.0013; APC_PS exceeds the tolerance by 0.0993; IX exceeds the tolerance by 34.6; IXa exceeds the tolerance by 0.0881; XIa exceeds the tolerance by 0.142; XI exceeds the tolerance by 28.3; XIIa exceeds the tolerance by 0.225; VII exceeds the tolerance by 6.63; VIIa exceeds the tolerance by 0.00174; X exceeds the tolerance by 31; Xa exceeds the tolerance by 0.111; IXa_VIIIa exceeds the tolerance by 0.000494; V exceeds the tolerance by 22.5; Va exceeds the tolerance by 0.0481; II exceeds the tolerance by 107; F exceeds the tolerance by 113; Fg exceeds the tolerance by 4.14e+03; DP exceeds the tolerance by 2.33e+03; P exceeds the tolerance by 4.39; XF exceeds the tolerance by 153; XIII exceeds the tolerance by 12.3; Pg exceeds the tolerance by 1.54e+03; APC exceeds the tolerance by 0.00748; IIa_Tmod exceeds the tolerance by 0.0465; PC exceeds the tolerance by 33.7; Tmod exceeds the tolerance by 10.2; TF exceeds the tolerance by 183; VIIa_TF exceeds the tolerance by 0.0467; VII_TF exceeds the tolerance by 0.00539; Xa_TFPI exceeds the tolerance by 0.027; TFPI exceeds the tolerance by 0.0248; PS exceeds the tolerance by 169; VKH2 exceeds the tolerance by 0.0649; Va_Xa exceeds the tolerance by 0.00066; XII exceeds the tolerance by 375; K exceeds the tolerance by 1.42; VK exceeds the tolerance by 0.513; VKO exceeds the tolerance by 0.0665; Pk exceeds the tolerance by 433; FDP exceeds the tolerance by 141; D exceeds the tolerance by 2.19e+03; TAT exceeds the tolerance by 835; VIIa_TF_Xa_TFPI exceeds the tolerance by 0.00025; XIIIa exceeds the tolerance by 18.3; VK_p exceeds the tolerance by 0.173; Integral_Fibrin exceeds the tolerance by 5.16e+03
BIOMD0000000340: IX exceeds the tolerance by 53.5; VII exceeds the tolerance by 6.72; X exceeds the tolerance by 89; II exceeds the tolerance by 522; PC exceeds the tolerance by 38.8; PS exceeds the tolerance by 148; VKH2 exceeds the tolerance by 0.0689; VK exceeds the tolerance by 0.00801; C_warf exceeds the tolerance by 0.896; VKO exceeds the tolerance by 0.0259; A_warf exceeds the tolerance by 1.47
BIOMD0000000404: Bias exceeds the tolerance by 0.24
BIOMD0000000408: ADPi exceeds the tolerance by 15.4; ATPi exceeds the tolerance by 9.85; Cri exceeds the tolerance by 672; PCri exceeds the tolerance by 677; PCr exceeds the tolerance by 677; ADP exceeds the tolerance by 28.2; ATP exceeds the tolerance by 22.7; Cr exceeds the tolerance by 672; P_ii exceeds the tolerance by 704; P_i exceeds the tolerance by 705; tmito exceeds the tolerance by 3.73; densyn exceeds the tolerance by 3.85; jsyn exceeds the tolerance by 194; vatpnorm exceeds the tolerance by 1.29; j_diff_pcr exceeds the tolerance by 23; j_diff_atp exceeds the tolerance by 170; r_diff_pcr exceeds the tolerance by 0.0694; phase exceeds the tolerance by 0.75; j_ck_mi exceeds the tolerance by 99; j_ck_mm exceeds the tolerance by 1.27e+03; j_diff_adp exceeds the tolerance by 170; j_diff_pi exceeds the tolerance by 166; j_diff_cr exceeds the tolerance by 23
BIOMD0000000436: HETE exceeds the tolerance by 5.34; PGH2 exceeds the tolerance by 12.7; PGE2 exceeds the tolerance by 20.5; PGF2a exceeds the tolerance by 6.12; PGD2 exceeds the tolerance by 147; PGJ2 exceeds the tolerance by 102; dPGJ2 exceeds the tolerance by 27.3; AA exceeds the tolerance by 286; GPCho exceeds the tolerance by 0.249; dPGD2 exceeds the tolerance by 73.7; LPSactivity exceeds the tolerance by 0.666; DGactivity exceeds the tolerance by 91.9; GPChoratio exceeds the tolerance by 49
BIOMD0000000439: R exceeds the tolerance by 0.044; L exceeds the tolerance by 0.0999; RL exceeds the tolerance by 0.0998; Gabg exceeds the tolerance by 0.051; RGabgL exceeds the tolerance by 0.00102; GaGTP exceeds the tolerance by 7.99e-07; Gbg exceeds the tolerance by 0.0252; RGSGaGTP exceeds the tolerance by 0.0216; GaGDPP exceeds the tolerance by 5.32e-05; GaGTPEffector exceeds the tolerance by 0.00296; inertGaGTP exceeds the tolerance by 3.65e-08; RGSinertGaGTP exceeds the tolerance by 0.00652; GaGDP exceeds the tolerance by 8e-06; P exceeds the tolerance by 0.00542; z1 exceeds the tolerance by 0.00276; z2 exceeds the tolerance by 0.00263; z3 exceeds the tolerance by 0.00254
BIOMD0000000479: L exceeds the tolerance by 0.0999; R exceeds the tolerance by 0.0425; LR exceeds the tolerance by 0.0998; Gabg exceeds the tolerance by 0.0419; RGabg exceeds the tolerance by 0.0825; LRGabg exceeds the tolerance by 0.000886; RRGSm exceeds the tolerance by 4.02e-05; LRRGSm exceeds the tolerance by 7.13e-05; RRGSmGabg exceeds the tolerance by 0.172; LRRGSmGabg exceeds the tolerance by 0.000153; GaGTP exceeds the tolerance by 2.78e-06; Gbg exceeds the tolerance by 0.0351; GaGTPEffector exceeds the tolerance by 0.00917; RGSc exceeds the tolerance by 0.00268; RGSm exceeds the tolerance by 0.174; RGSmGaGTP exceeds the tolerance by 0.0179; GaGTPEffectorOFF exceeds the tolerance by 7.41e-06; RGSmGaGTPEffectorOFF exceeds the tolerance by 0.0203; GaGDPP exceeds the tolerance by 4.44e-05; LRRGSmGaGTPEffectorOFF exceeds the tolerance by 1.41e-06; GaGDP exceeds the tolerance by 4.91e-06; P exceeds the tolerance by 0.00455; z1 exceeds the tolerance by 0.00858; z2 exceeds the tolerance by 0.0082; z3 exceeds the tolerance by 0.00791
BIOMD0000000480: species_10 exceeds the tolerance by 1.86; s9 exceeds the tolerance by 1.27e+05; s13 exceeds the tolerance by 7.11e+04; s15 exceeds the tolerance by 6.77e+04; s16 exceeds the tolerance by 1.41e+05; s19 exceeds the tolerance by 2.46e+04; s21 exceeds the tolerance by 6.74e+04; s22 exceeds the tolerance by 1.92e+03; s25 exceeds the tolerance by 2.02e+05; s17 exceeds the tolerance by 1.66e+04; species_1 exceeds the tolerance by 2.92e+05; species_2 exceeds the tolerance by 2.1e+05; species_3 exceeds the tolerance by 3.89e+04; species_4 exceeds the tolerance by 2.65e+05; species_5 exceeds the tolerance by 0.189; s4 exceeds the tolerance by 2.17e+05; s26 exceeds the tolerance by 2.15e+05; s27 exceeds the tolerance by 3.43e+05; s29 exceeds the tolerance by 5.73e+05; s30 exceeds the tolerance by 9.41e+04; s31 exceeds the tolerance by 8.56e+04; s33 exceeds the tolerance by 1.39e+05; species_6 exceeds the tolerance by 5.57e+05; species_8 exceeds the tolerance by 2.48e+05; species_9 exceeds the tolerance by 2.5e+03; parameter_17 exceeds the tolerance by 1.83; parameter_18 exceeds the tolerance by 0.133; parameter_79 exceeds the tolerance by 1.32e+03; parameter_67 exceeds the tolerance by 0.00133; parameter_68 exceeds the tolerance by 0.000819; parameter_69 exceeds the tolerance by 0.000893; parameter_71 exceeds the tolerance by 0.256; parameter_72 exceeds the tolerance by 0.165; parameter_73 exceeds the tolerance by 0.199; parameter_82 exceeds the tolerance by 8.95; parameter_83 exceeds the tolerance by 7.8; parameter_84 exceeds the tolerance by 3.34; parameter_80 exceeds the tolerance by 579; parameter_81 exceeds the tolerance by 248
BIOMD0000000494: AF1 exceeds the tolerance by 0.6; AF2 exceeds the tolerance by 43.3; E2 exceeds the tolerance by 174; FSH_R exceeds the tolerance by 0.563; FSH_bld exceeds the tolerance by 11.4; FSH_pit exceeds the tolerance by 1.18e+04; GnRH exceeds the tolerance by 0.0646; GnRH_R_a exceeds the tolerance by 0.000242; GnRH_R_i exceeds the tolerance by 0.000218; InhA exceeds the tolerance by 5.74; InhA_delay exceeds the tolerance by 25.2; InhB exceeds the tolerance by 112; LH_Pit exceeds the tolerance by 1.06e+05; LH_R exceeds the tolerance by 1.66; LH_bld exceeds the tolerance by 119; Lut1 exceeds the tolerance by 0.106; Lut2 exceeds the tolerance by 0.0614; Lut3 exceeds the tolerance by 0.0242; Lut4 exceeds the tolerance by 0.00636; OvF exceeds the tolerance by 0.085; P4 exceeds the tolerance by 0.726; PrF exceeds the tolerance by 2.88; R_FSH exceeds the tolerance by 1.85; R_FSH_des exceeds the tolerance by 1.28; R_Foll exceeds the tolerance by 0.333; R_GnRH_a exceeds the tolerance by 0.00216; R_GnRH_i exceeds the tolerance by 0.000544; R_LH exceeds the tolerance by 6.09; R_LH_des exceeds the tolerance by 4.42; Sc1 exceeds the tolerance by 0.269; Sc2 exceeds the tolerance by 0.164; AF3 exceeds the tolerance by 5.99; AF4 exceeds the tolerance by 0.0864; Ago_c exceeds the tolerance by 0.183; Ago_d exceeds the tolerance by 99.9; Ago_R_i exceeds the tolerance by 0.000578; Ago_R_a exceeds the tolerance by 0.000596; Ant_d exceeds the tolerance by 499; Ant_c exceeds the tolerance by 0.492; Ant_p exceeds the tolerance by 0.62; Ant_R exceeds the tolerance by 0.00182; s113 exceeds the tolerance by 499; s114 exceeds the tolerance by 14.3; s115 exceeds the tolerance by 14.3; s116 exceeds the tolerance by 4.78e-05; freq exceeds the tolerance by 10.4; mass exceeds the tolerance by 0.00163
BIOMD0000000534: mwf626e95e_543f_41e4_aad4_c6bf60ab345b exceeds the tolerance by 4.73e-05; mw810ff751_fa4e_4143_bd50_169b3e325e1e exceeds the tolerance by 0.00157; mw114aa90f_5f5b_4fe8_9406_361c8489b6a1 exceeds the tolerance by 18.5; mw30ae63db_6cd3_4b6f_93ad_3350cd360bcc exceeds the tolerance by 0.281; mw03db56ac_8dc6_4931_ae82_fef706d2ee3d exceeds the tolerance by 1.87e-05; mwf345ed7a_0622_403c_b816_c8749a2c9ded exceeds the tolerance by 227; mw1da111f2_a036_4392_8512_015005bdcbb7 exceeds the tolerance by 0.0996; mw80848184_e2dd_47ce_86d7_7a21479342bd exceeds the tolerance by 0.000589; mwd2d9d93a_3bd1_4f17_bac1_baba9ef2d55a exceeds the tolerance by 2.18e-07; mw4638f126_8cb8_4021_ab41_6ae195743ba0 exceeds the tolerance by 1.63e-05; mw0adf3eb4_a196_4c48_b10d_4e9e9faaf9e1 exceeds the tolerance by 5.78e-05; mw0eb6c959_d408_45a0_a450_928b8c5876bb exceeds the tolerance by 0.00907; mw42054cd7_17af_46da_970c_7f99151906ad exceeds the tolerance by 0.491; mw39c2e431_fdc3_4964_be29_6ca856620b1b exceeds the tolerance by 0.5; mwd5313618_89eb_4c8c_bc82_66f10f966349 exceeds the tolerance by 14.5; mw2e464cf3_a09c_4b7c_9f3c_06720016a48e exceeds the tolerance by 0.395; mw36ea78c1_ed71_4def_96d3_857a442d7195 exceeds the tolerance by 34.6; mwab41493c_6349_45f1_a226_3030cfed0e06 exceeds the tolerance by 0.00207; mwf405687b_7401_44ec_a0d6_4a2b35c13e8a exceeds the tolerance by 0.0572; mw3667a5e1_02c9_44a0_acb4_b0431faa822d exceeds the tolerance by 79.8; mw7becb5fe_8da8_4285_a821_0d77ad811b62 exceeds the tolerance by 2.25e-05; mw8c9107e6_f51d_442d_b2dc_2bfdbb8482ca exceeds the tolerance by 0.000903; mw824bc3d4_1ac3_4912_9b51_8f14ff1c96b9 exceeds the tolerance by 5.96e-07; mw6cce2109_0e32_4dd9_98ec_41173e8ef07d exceeds the tolerance by 0.0121; mw2b255f94_8018_4b99_bde8_918eeac45446 exceeds the tolerance by 0.672; mw48867e93_f170_44e8_ac7a_185b23e1bf3b exceeds the tolerance by 0.681; mw0083d743_836f_4238_a17f_4602193d5bc0 exceeds the tolerance by 19; mwd31f52cc_04e7_40e0_885f_c7b2d9e62215 exceeds the tolerance by 0.394; mw2c9b0499_3325_4394_8af3_bbf653a944a0 exceeds the tolerance by 0.00074; mw6335d5d7_c7b0_4bc0_b883_f7ee4915c2c3 exceeds the tolerance by 0.00245; mwf7796221_1fea_4274_a93e_c00adbf5778c exceeds the tolerance by 39.8; mw5d764bb8_5693_4ac8_9557_f65992cc5eb0 exceeds the tolerance by 0.0955; mwbc2f5464_81e5_43fd_8b39_f5a2756af72f exceeds the tolerance by 3.47
BIOMD0000000535: mwf626e95e_543f_41e4_aad4_c6bf60ab345b exceeds the tolerance by 0.000435; mwbbbce920_e8dd_4320_9386_fc94bfb2fc99 exceeds the tolerance by 0.00908; mw810ff751_fa4e_4143_bd50_169b3e325e1e exceeds the tolerance by 0.0869; mw114aa90f_5f5b_4fe8_9406_361c8489b6a1 exceeds the tolerance by 9.62; mw30ae63db_6cd3_4b6f_93ad_3350cd360bcc exceeds the tolerance by 0.0763; mw03db56ac_8dc6_4931_ae82_fef706d2ee3d exceeds the tolerance by 0.00109; mwf345ed7a_0622_403c_b816_c8749a2c9ded exceeds the tolerance by 682; mw1da111f2_a036_4392_8512_015005bdcbb7 exceeds the tolerance by 1.37; CRP_Suppression___ exceeds the tolerance by 4.44; mw80848184_e2dd_47ce_86d7_7a21479342bd exceeds the tolerance by 0.0491; mwd2d9d93a_3bd1_4f17_bac1_baba9ef2d55a exceeds the tolerance by 5.75e-05; mw4638f126_8cb8_4021_ab41_6ae195743ba0 exceeds the tolerance by 0.000969; mw10315fa3_6f13_4618_bda8_a8694bd3c374 exceeds the tolerance by 0.000167; mw0adf3eb4_a196_4c48_b10d_4e9e9faaf9e1 exceeds the tolerance by 0.000724; mw7d86cc23_a1af_44c3_bdb9_71e9b1bb2a83 exceeds the tolerance by 1.43e-05; mw0eb6c959_d408_45a0_a450_928b8c5876bb exceeds the tolerance by 0.43; mw42054cd7_17af_46da_970c_7f99151906ad exceeds the tolerance by 0.869; mw39c2e431_fdc3_4964_be29_6ca856620b1b exceeds the tolerance by 0.863; mwd5313618_89eb_4c8c_bc82_66f10f966349 exceeds the tolerance by 8; mw2e464cf3_a09c_4b7c_9f3c_06720016a48e exceeds the tolerance by 0.104; mw36ea78c1_ed71_4def_96d3_857a442d7195 exceeds the tolerance by 18.1; mw147d30ec_478e_4090_b496_128a131d29eb exceeds the tolerance by 0.011; mwab41493c_6349_45f1_a226_3030cfed0e06 exceeds the tolerance by 0.116; mwf405687b_7401_44ec_a0d6_4a2b35c13e8a exceeds the tolerance by 0.754; mw3667a5e1_02c9_44a0_acb4_b0431faa822d exceeds the tolerance by 239; mw7becb5fe_8da8_4285_a821_0d77ad811b62 exceeds the tolerance by 0.0013; mw8c9107e6_f51d_442d_b2dc_2bfdbb8482ca exceeds the tolerance by 0.063; mw824bc3d4_1ac3_4912_9b51_8f14ff1c96b9 exceeds the tolerance by 7.42e-05; mw6cce2109_0e32_4dd9_98ec_41173e8ef07d exceeds the tolerance by 0.565; mw2b255f94_8018_4b99_bde8_918eeac45446 exceeds the tolerance by 0.746; mw48867e93_f170_44e8_ac7a_185b23e1bf3b exceeds the tolerance by 0.739; mw0083d743_836f_4238_a17f_4602193d5bc0 exceeds the tolerance by 6.67; mwd31f52cc_04e7_40e0_885f_c7b2d9e62215 exceeds the tolerance by 0.0907; mw2c9b0499_3325_4394_8af3_bbf653a944a0 exceeds the tolerance by 0.00933; mwd65b5b39_dc1b_4e77_a999_67277a880e5e exceeds the tolerance by 0.0308; mw6335d5d7_c7b0_4bc0_b883_f7ee4915c2c3 exceeds the tolerance by 0.136; mwf7796221_1fea_4274_a93e_c00adbf5778c exceeds the tolerance by 118; mw5d764bb8_5693_4ac8_9557_f65992cc5eb0 exceeds the tolerance by 1.8; mwbc2f5464_81e5_43fd_8b39_f5a2756af72f exceeds the tolerance by 10.4
BIOMD0000000537: mwf626e95e_543f_41e4_aad4_c6bf60ab345b exceeds the tolerance by 0.000318; mwbbbce920_e8dd_4320_9386_fc94bfb2fc99 exceeds the tolerance by 0.0091; mw810ff751_fa4e_4143_bd50_169b3e325e1e exceeds the tolerance by 0.0872; mw114aa90f_5f5b_4fe8_9406_361c8489b6a1 exceeds the tolerance by 9.63; mw30ae63db_6cd3_4b6f_93ad_3350cd360bcc exceeds the tolerance by 4.25; mw03db56ac_8dc6_4931_ae82_fef706d2ee3d exceeds the tolerance by 0.00109; mwf345ed7a_0622_403c_b816_c8749a2c9ded exceeds the tolerance by 675; mw1da111f2_a036_4392_8512_015005bdcbb7 exceeds the tolerance by 66; CRP_Suppression___ exceeds the tolerance by 4.45; CRP____of_baseline exceeds the tolerance by 4.36; mw80848184_e2dd_47ce_86d7_7a21479342bd exceeds the tolerance by 0.0493; mwd2d9d93a_3bd1_4f17_bac1_baba9ef2d55a exceeds the tolerance by 5.77e-05; mw4638f126_8cb8_4021_ab41_6ae195743ba0 exceeds the tolerance by 0.000973; mw10315fa3_6f13_4618_bda8_a8694bd3c374 exceeds the tolerance by 0.438; mw0adf3eb4_a196_4c48_b10d_4e9e9faaf9e1 exceeds the tolerance by 0.00221; mw7d86cc23_a1af_44c3_bdb9_71e9b1bb2a83 exceeds the tolerance by 1.44e-05; mw0eb6c959_d408_45a0_a450_928b8c5876bb exceeds the tolerance by 0.43; mw42054cd7_17af_46da_970c_7f99151906ad exceeds the tolerance by 0.871; mw39c2e431_fdc3_4964_be29_6ca856620b1b exceeds the tolerance by 0.864; mwd5313618_89eb_4c8c_bc82_66f10f966349 exceeds the tolerance by 8.01; mw2e464cf3_a09c_4b7c_9f3c_06720016a48e exceeds the tolerance by 6.09; mw36ea78c1_ed71_4def_96d3_857a442d7195 exceeds the tolerance by 18.1; mw147d30ec_478e_4090_b496_128a131d29eb exceeds the tolerance by 0.011; mwab41493c_6349_45f1_a226_3030cfed0e06 exceeds the tolerance by 0.116; mwf405687b_7401_44ec_a0d6_4a2b35c13e8a exceeds the tolerance by 42.7; mw3667a5e1_02c9_44a0_acb4_b0431faa822d exceeds the tolerance by 212; mw772cbf20_3fc1_4800_ae59_77884f1ae333 exceeds the tolerance by 6.61; mw7becb5fe_8da8_4285_a821_0d77ad811b62 exceeds the tolerance by 0.0013; mw8c9107e6_f51d_442d_b2dc_2bfdbb8482ca exceeds the tolerance by 0.0633; mw824bc3d4_1ac3_4912_9b51_8f14ff1c96b9 exceeds the tolerance by 7.45e-05; mw6cce2109_0e32_4dd9_98ec_41173e8ef07d exceeds the tolerance by 0.566; mw2b255f94_8018_4b99_bde8_918eeac45446 exceeds the tolerance by 0.748; mw48867e93_f170_44e8_ac7a_185b23e1bf3b exceeds the tolerance by 0.74; mw0083d743_836f_4238_a17f_4602193d5bc0 exceeds the tolerance by 6.69; mwd31f52cc_04e7_40e0_885f_c7b2d9e62215 exceeds the tolerance by 6.06; mw2c9b0499_3325_4394_8af3_bbf653a944a0 exceeds the tolerance by 0.0115; mwd65b5b39_dc1b_4e77_a999_67277a880e5e exceeds the tolerance by 0.0309; mw6335d5d7_c7b0_4bc0_b883_f7ee4915c2c3 exceeds the tolerance by 0.136; mwf7796221_1fea_4274_a93e_c00adbf5778c exceeds the tolerance by 107; mw5d764bb8_5693_4ac8_9557_f65992cc5eb0 exceeds the tolerance by 21.6; mwbc2f5464_81e5_43fd_8b39_f5a2756af72f exceeds the tolerance by 9.04
BIOMD0000000563: PAMP exceeds the tolerance by 0.652; R exceeds the tolerance by 0.285; R_0 exceeds the tolerance by 0.286; E_int exceeds the tolerance by 0.403; Callose exceeds the tolerance by 0.28; Path exceeds the tolerance by 0.786; Path_bulk exceeds the tolerance by 0.999; PRR exceeds the tolerance by 0.393; PRR_0 exceeds the tolerance by 0.393; E exceeds the tolerance by 0.262
BIOMD0000000570: species_2 exceeds the tolerance by 0.00662; species_3 exceeds the tolerance by 0.00828; species_4 exceeds the tolerance by 0.0213; species_5 exceeds the tolerance by 0.000153; species_6 exceeds the tolerance by 0.000284; species_7 exceeds the tolerance by 0.000449; species_8 exceeds the tolerance by 0.00105; species_9 exceeds the tolerance by 0.000743; species_10 exceeds the tolerance by 0.0272; species_11 exceeds the tolerance by 0.25; species_12 exceeds the tolerance by 0.244; species_13 exceeds the tolerance by 0.0397; species_17 exceeds the tolerance by 0.135; species_18 exceeds the tolerance by 0.0204; species_19 exceeds the tolerance by 0.827; dHb exceeds the tolerance by 0.0353; parameter_10 exceeds the tolerance by 0.00828; parameter_13 exceeds the tolerance by 0.000436; parameter_22 exceeds the tolerance by 0.000284; dAMP_dATP exceeds the tolerance by 0.00792; v_Mito_H3 exceeds the tolerance by 0.000202; parameter_37 exceeds the tolerance by 0.114; F_out exceeds the tolerance by 0.114; rCBF exceeds the tolerance by 9.5; rCMRO2 exceeds the tolerance by 0.0106; rVv exceeds the tolerance by 2.04; O2c_bar exceeds the tolerance by 1.66; ratioO2c_bar exceeds the tolerance by 0.293; compartment_4 exceeds the tolerance by 0.0483; parameter_7 exceeds the tolerance by 0.00662
BIOMD0000000601: mwd805cc43_4a96_472f_a894_c119a6aa895f exceeds the tolerance by 0.00907; mw40a96ef6_32da_46d1_9712_4f53f60bad43 exceeds the tolerance by 0.000126; mwe1a0a651_d2d5_4f75_8d45_9336c60eb9a6 exceeds the tolerance by 2.75e-07; mw168e0d8a_b9f7_4d4c_b437_a81206c5d381 exceeds the tolerance by 0.02; parameter_26 exceeds the tolerance by 0.00907; parameter_23 exceeds the tolerance by 0.988
BIOMD0000000613: PTH exceeds the tolerance by 261; S exceeds the tolerance by 0.0101; B exceeds the tolerance by 13; P exceeds the tolerance by 0.37; T exceeds the tolerance by 0.0096; R exceeds the tolerance by 0.00135; OC exceeds the tolerance by 9.16e-06; L exceeds the tolerance by 0.0021; O exceeds the tolerance by 1.67; Q exceeds the tolerance by 0.708; RX2 exceeds the tolerance by 6.5; CREB exceeds the tolerance by 0.236; BCL2 exceeds the tolerance by 50.3; TERISC exceeds the tolerance by 4.85e+03; A exceeds the tolerance by 1.81; TGFBact exceeds the tolerance by 0.000525; M exceeds the tolerance by 3.75e-08; N exceeds the tolerance by 9.5e-06; Osteoclast exceeds the tolerance by 9.16e-06; OCeqn exceeds the tolerance by 0.000533; MOCratio exceeds the tolerance by 0.000668; MOCratioEff exceeds the tolerance by 0.0017; J14OCdepend exceeds the tolerance by 0.00467; J14 exceeds the tolerance by 0.0014; J41 exceeds the tolerance by 0.000649; koutTGFeqn exceeds the tolerance by 3.17e-05; MeffOC exceeds the tolerance by 0.0231; LsurvOC exceeds the tolerance by 0.00674; KLSoc exceeds the tolerance by 4.23e-05; C4 exceeds the tolerance by 18.6; J15a exceeds the tolerance by 0.00431; J15 exceeds the tolerance by 0.0413; J42 exceeds the tolerance by 0.0191; PTHconc exceeds the tolerance by 18.6; LpthEff exceeds the tolerance by 0.241; kinL exceeds the tolerance by 0.000281; pO exceeds the tolerance by 26.3; RX2Kout exceeds the tolerance by 1.57; crebKin exceeds the tolerance by 0.0337; bcl2Kin exceeds the tolerance by 44.9; CaConc exceeds the tolerance by 0.0264; PhosEff exceeds the tolerance by 5.35e-05; T68 exceeds the tolerance by 0.0914; SE exceeds the tolerance by 0.576; C8 exceeds the tolerance by 0.927; C1 exceeds the tolerance by 0.0264; T36 exceeds the tolerance by 7.45e-05; T37 exceeds the tolerance by 7.47e-05; CaFilt exceeds the tolerance by 0.0476; ReabsPTHeff exceeds the tolerance by 0.0494; CaReabsActive exceeds the tolerance by 0.209; T20 exceeds the tolerance by 0.195; T10 exceeds the tolerance by 0.00462; J27a exceeds the tolerance by 0.195; J27 exceeds the tolerance by 0.15; ScaEff exceeds the tolerance by 0.00992; T72 exceeds the tolerance by 0.893; T73 exceeds the tolerance by 0.0549; T74 exceeds the tolerance by 0.0549; T75 exceeds the tolerance by 0.000455; T76 exceeds the tolerance by 0.000456; J48a exceeds the tolerance by 0.00203; J48 exceeds the tolerance by 0.00203; PicOBkb exceeds the tolerance by 0.000237; PicOBkbEff exceeds the tolerance by 0.00104; RUNX2 exceeds the tolerance by 5.15; RUNX2kbPrimeEff exceeds the tolerance by 1.94e-05; kbprime exceeds the tolerance by 1.95e-05; kbslow exceeds the tolerance by 5.42e-06; Frackb2 exceeds the tolerance by 0.044; T31 exceeds the tolerance by 0.000908; T83 exceeds the tolerance by 0.0027; J40 exceeds the tolerance by 0.00166; T85Rpart exceeds the tolerance by 0.00188; T85 exceeds the tolerance by 0.00171; F11 exceeds the tolerance by 0.00171; INparenCtriol exceeds the tolerance by 1.31e+22; Ctriol50 exceeds the tolerance by 0.705; FCTD exceeds the tolerance by 0.0202; T63 exceeds the tolerance by 36.6; EPTH exceeds the tolerance by 42.4; SPTH exceeds the tolerance by 42.4; TERIPK exceeds the tolerance by 3.44e+03
BIOMD0000000650: l exceeds the tolerance by 0.367; m exceeds the tolerance by 1.05; n exceeds the tolerance by 0.639
BIOMD0000000675: Cdc20 exceeds the tolerance by 0.049; Clb2 exceeds the tolerance by 0.0036; Cdc20_T exceeds the tolerance by 0.000261; Hct1 exceeds the tolerance by 0.0439; Mcm1 exceeds the tolerance by 0.0127; Clb2_Sic1 exceeds the tolerance by 8.33e-06; Sic1 exceeds the tolerance by 0.000168; Swi5 exceeds the tolerance by 0.0178; Sic1_T exceeds the tolerance by 0.000526; Clb5 exceeds the tolerance by 0.00941; Clb5_Sic1 exceeds the tolerance by 0.000369; Clb5_T exceeds the tolerance by 0.00904; Clb2_T exceeds the tolerance by 0.00361; Vi_20 exceeds the tolerance by 9.89; Vi_t1 exceeds the tolerance by 0.00496; Vd_b2 exceeds the tolerance by 0.0898; Vd_b5 exceeds the tolerance by 0.0122; Vd2_c1 exceeds the tolerance by 0.00271; Va_sbf exceeds the tolerance by 0.00368; ORI exceeds the tolerance by 0.0426; BUD exceeds the tolerance by 0.00454; SPN exceeds the tolerance by 0.00192
BIOMD0000000681: K_T exceeds the tolerance by 274; phi_I exceeds the tolerance by 904; phi_R exceeds the tolerance by 382; T exceeds the tolerance by 6.95; total_M exceeds the tolerance by 1.12e+03
BIOMD0000000695: xFinal_1 exceeds the tolerance by 0.907; xFinal_2 exceeds the tolerance by 53.5; xFinal_3 exceeds the tolerance by 37.4; xFinal_4 exceeds the tolerance by 86.5; xFinal_5 exceeds the tolerance by 31.1; xFinal_6 exceeds the tolerance by 27.8; xFinal_7 exceeds the tolerance by 329; xFinal_8 exceeds the tolerance by 8.39e+03; xFinal_9 exceeds the tolerance by 5.27e+03; xFinal_10 exceeds the tolerance by 1.91e+04; xFinal_12 exceeds the tolerance by 1.73e+04
BIOMD0000000706: degr_Foxo1 exceeds the tolerance by 6.27e+11; cytoplasm_Foxo1_Pa0_Ac0_pUb0 exceeds the tolerance by 1.42e+11; nucleus_Foxo1_Pa0_Ac0_pUb0 exceeds the tolerance by 1.12e+13; dnabound_Foxo1_Pa0_Ac0_pUb0 exceeds the tolerance by 9.49e+13; cytoplasm_Foxo1_Pa0_Ac0_pUb1 exceeds the tolerance by 2.87e+09; nucleus_Foxo1_Pa0_Ac0_pUb1 exceeds the tolerance by 3.24e+11; dnabound_Foxo1_Pa0_Ac0_pUb1 exceeds the tolerance by 3.04e+12; cytoplasm_Foxo1_Pa0_Ac1_pUb0 exceeds the tolerance by 6.5e+12; nucleus_Foxo1_Pa0_Ac1_pUb0 exceeds the tolerance by 8.14e+14; dnabound_Foxo1_Pa0_Ac1_pUb0 exceeds the tolerance by 4.1e+15; cytoplasm_Foxo1_Pa0_Ac1_pUb1 exceeds the tolerance by 4.68e+10; nucleus_Foxo1_Pa0_Ac1_pUb1 exceeds the tolerance by 8.95e+12; dnabound_Foxo1_Pa0_Ac1_pUb1 exceeds the tolerance by 4.72e+13; cytoplasm_Foxo1_Pa1_Ac0_pUb0 exceeds the tolerance by 6.65e+11; nucleus_Foxo1_Pa1_Ac0_pUb0 exceeds the tolerance by 8.06e+12; dnabound_Foxo1_Pa1_Ac0_pUb0 exceeds the tolerance by 8.85e+13; cytoplasm_Foxo1_Pa1_Ac0_pUb1 exceeds the tolerance by 2.15e+10; nucleus_Foxo1_Pa1_Ac0_pUb1 exceeds the tolerance by 2.5e+11; dnabound_Foxo1_Pa1_Ac0_pUb1 exceeds the tolerance by 3e+12; cytoplasm_Foxo1_Pa1_Ac1_pUb0 exceeds the tolerance by 4.76e+13; nucleus_Foxo1_Pa1_Ac1_pUb0 exceeds the tolerance by 5.27e+14; dnabound_Foxo1_Pa1_Ac1_pUb0 exceeds the tolerance by 3.52e+15; cytoplasm_Foxo1_Pa1_Ac1_pUb1 exceeds the tolerance by 2.64e+11; nucleus_Foxo1_Pa1_Ac1_pUb1 exceeds the tolerance by 6.1e+12; dnabound_Foxo1_Pa1_Ac1_pUb1 exceeds the tolerance by 4.4e+13; Foxo1_Pa0_tot exceeds the tolerance by 1.08e+14; Foxo1_Pa1_tot exceeds the tolerance by 1.07e+14; Foxo1_Ac0_tot exceeds the tolerance by 4e+11; Foxo1_Ac1_tot exceeds the tolerance by 1.5e+12; Foxo1_pUb0_tot exceeds the tolerance by 2.97e+11; Foxo1_pUb1_tot exceeds the tolerance by 8.34e+11; cytoplasm_Foxo1_tot exceeds the tolerance by 8.92e+13; nucleus_Foxo1_tot exceeds the tolerance by 4.38e+13; dnabound_Foxo1_tot exceeds the tolerance by 4.67e+13; Foxo1_all exceeds the tolerance by 1.13e+12; nucleus_RNA_Inr exceeds the tolerance by 1.04e+15; cytoplasm_RNA_Inr exceeds the tolerance by 1.24e+12; cytoplasm_Inr exceeds the tolerance by 3.9e+13; nucleus_RNA_Sod2 exceeds the tolerance by 1.04e+15; cytoplasm_RNA_Sod2 exceeds the tolerance by 1.24e+12; cytoplasm_Sod2 exceeds the tolerance by 3.9e+13; Akt exceeds the tolerance by 6.05e+15; Foxo1_all_rate exceeds the tolerance by 0.00939
BIOMD0000000718: Elong exceeds the tolerance by 1.23; DNA exceeds the tolerance by 0.231
BIOMD0000000727: DnaA exceeds the tolerance by 0.183; GcrA exceeds the tolerance by 0.737; CtrA exceeds the tolerance by 1.21; CtrA_P exceeds the tolerance by 1.85; DivK exceeds the tolerance by 0.19; DivK_P exceeds the tolerance by 0.107; I exceeds the tolerance by 1.06; CcrM exceeds the tolerance by 0.879; hcori exceeds the tolerance by 0.979; hctrA exceeds the tolerance by 0.999; hccrM exceeds the tolerance by 0.999; hftsZ exceeds the tolerance by 0.999; Ini exceeds the tolerance by 0.00033; DNA exceeds the tolerance by 1.33; Count exceeds the tolerance by 0.999; PodJL exceeds the tolerance by 0.433; PerP exceeds the tolerance by 0.378; DivJ exceeds the tolerance by 1.04; CckA_P exceeds the tolerance by 0.0718; CpdR exceeds the tolerance by 0.0158; RcdA exceeds the tolerance by 0.704; ParAADP exceeds the tolerance by 0.611; FtsZ exceeds the tolerance by 1.2; Zring exceeds the tolerance by 0.949; Elong exceeds the tolerance by 1.33; Z exceeds the tolerance by 0.898; FtsQ exceeds the tolerance by 1.1
BIOMD0000000734: FeRBC exceeds the tolerance by 3.11e-06; NTBI exceeds the tolerance by 2.92e-06; FeBM_0 exceeds the tolerance by 4.31e-06; PSpleen exceeds the tolerance by 0.883; PRBC exceeds the tolerance by 63.6; Total_Fe___in_body exceeds the tolerance by 3.07e+15; FePlasma exceeds the tolerance by 3.07e+15; PLiver exceeds the tolerance by 11.6; PDuo exceeds the tolerance by 0.209; FePlasma_conc_ exceeds the tolerance by 2.92e-06; POutside exceeds the tolerance by 23.9; PRest exceeds the tolerance by 24.2; PPlasma exceeds the tolerance by 99.9; PBM exceeds the tolerance by 22.3
BIOMD0000000736: FeDuo exceeds the tolerance by 0.07; FeRBC exceeds the tolerance by 0.015; FeSpleen exceeds the tolerance by 0.0404; FeLiver exceeds the tolerance by 0.00265; Tf exceeds the tolerance by 1.15e-05; Fe2Tf exceeds the tolerance by 9.78e-06; Fe1Tf exceeds the tolerance by 7.52e-07; FeRest exceeds the tolerance by 8.73e-06; FeBM exceeds the tolerance by 0.00168; Total_Fe__particle exceeds the tolerance by 3.26e+18; Total_Fe__conc exceeds the tolerance by 0.000234; FePlasma__particle exceeds the tolerance by 1.83e+16; Total_Fe__g exceeds the tolerance by 0.000301; FePlasma_conc exceeds the tolerance by 2.23e-05; TfSaturation exceeds the tolerance by 30.1
BIOMD0000000749: E exceeds the tolerance by 1.14e-06
BIOMD0000000806: UnInfected_Tumour_Cells_Xu exceeds the tolerance by 3.13e+09; Infected_Tumour_Cells_Xi exceeds the tolerance by 6.39e+03; Virus_Xv exceeds the tolerance by 3.6e+06; Effector_Cytotoxic_CD8_TCells__Xe exceeds the tolerance by 8.56e+03; M1_Macrophage_Xm1 exceeds the tolerance by 1.94e+03; M2_Macrophage_Xm2 exceeds the tolerance by 1.47e+06
BIOMD0000000814: Drug_Concentration_C exceeds the tolerance by 0.598; Tumor_Cell_Population_P exceeds the tolerance by 25.4; Damaged_Tumor_Cells_D exceeds the tolerance by 10.5
BIOMD0000000816: Uninfected_Tumor_Cell_U exceeds the tolerance by 4.49e+15; Infected_Cancer_Cell_I exceeds the tolerance by 1.91e+03; Oncolytic_Adenovirus_V exceeds the tolerance by 2.48e+03; Tumor_targeting_T_cells_T exceeds the tolerance by 8.99e+03; Naive_T_cells_A exceeds the tolerance by 2.73; Dendritic_Cells_D exceeds the tolerance by 1.74; Total_cells_N exceeds the tolerance by 4.49e+15; total_tumor_cells exceeds the tolerance by 4.49e+15
BIOMD0000000817: Uninfected_Tumor_Cell_U exceeds the tolerance by 4.44e+15; Infected_Cancer_Cell_I exceeds the tolerance by 1.1e+05; Oncolytic_Adenovirus_V exceeds the tolerance by 1.38e+05; Tumor_targeting_T_cells_T exceeds the tolerance by 3.54e+05; Dendritic_Cells_D exceeds the tolerance by 1.74; Total_cells_N exceeds the tolerance by 4.44e+15; total_tumor_cells exceeds the tolerance by 4.44e+15
BIOMD0000000818: Myc exceeds the tolerance by 0.365; AKT exceeds the tolerance by 0.587; AKTp exceeds the tolerance by 0.588; PI3K exceeds the tolerance by 0.9; GSK3B exceeds the tolerance by 0.594; GSK3Bp exceeds the tolerance by 0.595; ERK exceeds the tolerance by 0.9; Myc_ser62 exceeds the tolerance by 2.75; Myc_thr58 exceeds the tolerance by 0.11; Myc_total exceeds the tolerance by 2.29
BIOMD0000000820: tumor_at_Exp_Lin_growth exceeds the tolerance by 2.69e+43
BIOMD0000000825: Resistant_tumor_R exceeds the tolerance by 0.999; Sensitive_tumor_S exceeds the tolerance by 1; Tumor_Volume_V exceeds the tolerance by 0.987
BIOMD0000000828: Glucose_G exceeds the tolerance by 1.56; Drug_D exceeds the tolerance by 0.744; miR_451_M exceeds the tolerance by 3.23; AMPK_A exceeds the tolerance by 3.6; mTOR_R exceeds the tolerance by 2.96; deltaD exceeds the tolerance by 0.525
BIOMD0000000829: Glucose_G exceeds the tolerance by 1.98; Drug_D exceeds the tolerance by 0.759; miR_451_M exceeds the tolerance by 1.42; AMPK_A exceeds the tolerance by 2.4; mTOR_R exceeds the tolerance by 0.398; deltaD exceeds the tolerance by 1.14; Cdh1 exceeds the tolerance by 0.948; CycB exceeds the tolerance by 0.0708; p55cdc_T exceeds the tolerance by 0.956; mass_s exceeds the tolerance by 0.625; p55cdc_A exceeds the tolerance by 0.88; Plk1 exceeds the tolerance by 0.104
BIOMD0000000901: Fat_Mass exceeds the tolerance by 9.96; Body_Mass exceeds the tolerance by 9.91; alpha exceeds the tolerance by 4.98; p___Ratio exceeds the tolerance by 0.011; Energy_Expenditure_Rate exceeds the tolerance by 0.49; Psy exceeds the tolerance by 0.0136
BIOMD0000000918: E2F exceeds the tolerance by 17.6; CycD exceeds the tolerance by 0.24; CycE exceeds the tolerance by 0.00449; Rb exceeds the tolerance by 0.00326; Phosphorylated_Rb exceeds the tolerance by 72.6; Rb_E2F_complex exceeds the tolerance by 127; serum exceeds the tolerance by 2
BIOMD0000000928: solution0 exceeds the tolerance by 0.266; solution1 exceeds the tolerance by 2.41; solution2 exceeds the tolerance by 0.682; solution3 exceeds the tolerance by 0.499
BIOMD0000000955: Susceptible exceeds the tolerance by 0.866; Infected exceeds the tolerance by 0.162; Diagnosed exceeds the tolerance by 0.131; Ailing exceeds the tolerance by 0.0463; Recognized exceeds the tolerance by 0.341; Threatened exceeds the tolerance by 0.179; Healed exceeds the tolerance by 0.568; Extinct exceeds the tolerance by 0.0846
BIOMD0000000960: Susceptible exceeds the tolerance by 4.03e+06; Exposed exceeds the tolerance by 4e+05; Infectious exceeds the tolerance by 1.2e+04; Asymptomatic exceeds the tolerance by 1.01e+05; Hospitalized exceeds the tolerance by 3.34e+04; Recovered exceeds the tolerance by 4.03e+06; Deceased exceeds the tolerance by 8.35e+03; Cumulative_Cases exceeds the tolerance by 2.14e+05; l_1 exceeds the tolerance by 0.538; beta_1 exceeds the tolerance by 0.194
BIOMD0000000969: Susceptible_Counties_with_airports exceeds the tolerance by 1.76e+06; Infected_Counties_with_airports exceeds the tolerance by 1.93e+05; Hospitalised_Counties_with_airports exceeds the tolerance by 7.45e+04; ICU_Counties_with_airports exceeds the tolerance by 1.04e+04; Deceased_Counties_with_airports exceeds the tolerance by 1.09e+05; Recovered_Counties_with_airports exceeds the tolerance by 1.31e+06; Discharged_Counties_with_airports exceeds the tolerance by 1.53e+05; Susceptible_Counties_neighbouring_counties_with_airports exceeds the tolerance by 1.31e+06; Infected_Counties_neighbouring_counties_with_airports exceeds the tolerance by 1.43e+05; Hospitalised_Counties_neighbouring_counties_with_airports exceeds the tolerance by 7.1e+04; ICU_Counties_neighbouring_counties_with_airports exceeds the tolerance by 1.78e+04; Deceased_Counties_neighbouring_counties_with_airports exceeds the tolerance by 9.59e+04; Recovered_Counties_neighbouring_counties_with_airports exceeds the tolerance by 8.92e+05; Discharged_Counties_neighbouring_counties_with_airports exceeds the tolerance by 1.27e+05; Susceptible_Counties_with_highways exceeds the tolerance by 2.92e+05; Infected_Counties_with_highways exceeds the tolerance by 3.5e+04; Hospitalised_Counties_with_highways exceeds the tolerance by 2.01e+04; ICU_Counties_with_highways exceeds the tolerance by 5.58e+03; Deceased_Counties_with_highways exceeds the tolerance by 1.25e+04; Recovered_Counties_with_highways exceeds the tolerance by 1.93e+05; Discharged_Counties_with_highways exceeds the tolerance by 2.91e+04; Susceptible_Low_risk_counties exceeds the tolerance by 5.47e+04; Infected_Low_risk_counties exceeds the tolerance by 5.68e+03; Hospitalised_Low_risk_counties exceeds the tolerance by 5.24e+03; ICU_Low_risk_counties exceeds the tolerance by 1.11e+03; Deceased_Low_risk_counties exceeds the tolerance by 5.87e+03; Recovered_Low_risk_counties exceeds the tolerance by 3.06e+04; Discharged_Low_risk_counties exceeds the tolerance by 7.71e+03; Cumulative_cases_Counties_with_airports exceeds the tolerance by 1.69e+06; Cumulative_cases_Low_risk_counties exceeds the tolerance by 4.96e+04; Cumulative_cases_Counties_neighbouring_counties_with_airports exceeds the tolerance by 1.23e+06; Total_hospitalisations exceeds the tolerance by 5.4e+05; Cumulative_cases_Counties_with_highways exceeds the tolerance by 2.68e+05; Total_cumulative_cases exceeds the tolerance by 3.24e+06; Total_deaths exceeds the tolerance by 2.23e+05
BIOMD0000000976: Susceptible exceeds the tolerance by 1.27e+07; Infected_strong_immune_system exceeds the tolerance by 2.47e+06; Infected_weak_immune_system exceeds the tolerance by 2.32e+06; Recovered exceeds the tolerance by 7.16e+06
BIOMD0000000978: Susceptible exceeds the tolerance by 3.53e+07; Exposed exceeds the tolerance by 7.92e+06; Infected exceeds the tolerance by 6.49e+06; Recovered exceeds the tolerance by 3.53e+07; Cumulative_cases exceeds the tolerance by 3.53e+07
BIOMD0000000983: S_c exceeds the tolerance by 6.17e+07; S_u exceeds the tolerance by 5.18e+07; E exceeds the tolerance by 1.49e+07; I_r exceeds the tolerance by 5.13e+06; I_u exceeds the tolerance by 8.43e+06; R exceeds the tolerance by 6.25e+07; Q exceeds the tolerance by 6.94e+06; m_t exceeds the tolerance by 0.929
BIOMD0000000986: Pyranine_single_compartment_model exceeds the tolerance by 54.9; Pyranine_three_compartment_model_compartment_1 exceeds the tolerance by 44.3; Pyranine_three_compartment_model_compartment_2 exceeds the tolerance by 7.68; Pyranine_three_compartment_model_compartment_3 exceeds the tolerance by 0.922; Total_Pyranine exceeds the tolerance by 52.9
BIOMD0000001006: DNA_damage exceeds the tolerance by 1.43; IR exceeds the tolerance by 0.999; p53_total exceeds the tolerance by 0.0872; p53_ub exceeds the tolerance by 0.0198; p53_ub_ub exceeds the tolerance by 0.000415; Mdm2_cyt exceeds the tolerance by 0.00811; Mdm2_p_cyt exceeds the tolerance by 0.00571; Mdm2_p_nuc exceeds the tolerance by 0.159; p53 exceeds the tolerance by 0.0678; MDM2_total exceeds the tolerance by 0.00797; kd2_0 exceeds the tolerance by 0.00876
BIOMD0000001019: Cm exceeds the tolerance by 2.59e+06; Ct exceeds the tolerance by 2e+06; T exceeds the tolerance by 5.68e+08
BIOMD0000001020: Cm exceeds the tolerance by 711; Ct exceeds the tolerance by 1.27e+07; T exceeds the tolerance by 2.69e+28
BIOMD0000001027: mLiver exceeds the tolerance by 324; mKidneyPlasma exceeds the tolerance by 2.93; mRemainder exceeds the tolerance by 211; mPlasmaVenous exceeds the tolerance by 27.7; mHeart exceeds the tolerance by 9.21; mMuscle exceeds the tolerance by 1.11e+03; mAdipose exceeds the tolerance by 35.9; mBrain exceeds the tolerance by 9.71; mFeces exceeds the tolerance by 3.85e+03; mUrine exceeds the tolerance by 6.78e+03; mIntestineLumen exceeds the tolerance by 4.9e+03; mPlasmaArterial exceeds the tolerance by 9.22; mLung exceeds the tolerance by 16.2; mPortalVein exceeds the tolerance by 6.38; mStomach exceeds the tolerance by 14.1; mIntestineEnterocytes exceeds the tolerance by 999; mKidneyTissue exceeds the tolerance by 23; mIntestineVascular exceeds the tolerance by 138; mStomachLumen exceeds the tolerance by 3.95; mKidneyTubular exceeds the tolerance by 161; mgIntestineLumen exceeds the tolerance by 0.634; mgBrain exceeds the tolerance by 0.00125; mgAdipose exceeds the tolerance by 0.00464; mgRemainder exceeds the tolerance by 0.0272; mgPortalVein exceeds the tolerance by 0.000824; mgUrine exceeds the tolerance by 0.876; mgFeces exceeds the tolerance by 0.497; mgIntestineEnterocytes exceeds the tolerance by 0.129; mgPlasmaArterial exceeds the tolerance by 0.00119; mgLung exceeds the tolerance by 0.00209; mgKidneyPlasma exceeds the tolerance by 0.000377; mIntestineSum exceeds the tolerance by 1.63e+03; mKidneySum exceeds the tolerance by 405; mgKidneyTissues exceeds the tolerance by 0.00297; mgIntestineVascular exceeds the tolerance by 0.0178; mgStomachLumen exceeds the tolerance by 0.00051; mArterialPlasma__for_kidney exceeds the tolerance by 26.8; mgKidneyTubular exceeds the tolerance by 0.0208; mgKidneyTotal exceeds the tolerance by 0.0242; mgIntestineTotal exceeds the tolerance by 0.147; mgLiver exceeds the tolerance by 0.0419; mgPlasmaVenous exceeds the tolerance by 0.00357; mgHeart exceeds the tolerance by 0.00119; mgMuscle exceeds the tolerance by 0.143; mgStomach exceeds the tolerance by 0.00182
BIOMD0000001028: mLiver exceeds the tolerance by 1.2e+05; mKidneyPlasma exceeds the tolerance by 940; mRemainder exceeds the tolerance by 7.8e+04; mPlasmaVenous exceeds the tolerance by 1.36e+04; mHeart exceeds the tolerance by 5.3e+03; mMuscle exceeds the tolerance by 5.05e+05; mAdipose exceeds the tolerance by 6.1e+04; mBrain exceeds the tolerance by 6.79e+03; mFeces exceeds the tolerance by 1.49e+06; mUrineExternal exceeds the tolerance by 1.53e+06; mIntestineLumen exceeds the tolerance by 4.92e+05; mPlasmaArterial exceeds the tolerance by 4.54e+03; mLung exceeds the tolerance by 9.67e+03; mPortalVein exceeds the tolerance by 2.91e+03; mStomach exceeds the tolerance by 2.84e+03; mEnterocytes exceeds the tolerance by 3.75e+05; mKidneyTissue exceeds the tolerance by 5.62e+03; mIntestineVascular exceeds the tolerance by 6.4e+04; mStomachLumen exceeds the tolerance by 1.11e+06; mRBC exceeds the tolerance by 2.23e+03; mKidneyTubular exceeds the tolerance by 2.51e+05; mgIntestineLumen exceeds the tolerance by 63.5; mgStomachLumen exceeds the tolerance by 143; mgLiver exceeds the tolerance by 15.5; mgVenousPlasma exceeds the tolerance by 1.76; mgBrain exceeds the tolerance by 0.876; mgHeart exceeds the tolerance by 0.684; mgKidneyPlasma exceeds the tolerance by 0.121; mgRemainder exceeds the tolerance by 10.1; mArterialPlasma__kidney exceeds the tolerance by 6.06; mgAdipose exceeds the tolerance by 7.88; mgArterialPlasma exceeds the tolerance by 0.586; mgLung exceeds the tolerance by 1.25; mgStomach exceeds the tolerance by 0.366; mgEnterocytes exceeds the tolerance by 48.5; mgKidneyTissues exceeds the tolerance by 0.726; mIntestineTotal exceeds the tolerance by 615; mgIntestineVascular exceeds the tolerance by 8.26; mgRBC exceeds the tolerance by 0.288; mKidneyTotal exceeds the tolerance by 833; mgKidneyTubular exceeds the tolerance by 32.4; mgMuscle exceeds the tolerance by 65.2; mgPortalVein exceeds the tolerance by 0.375; mgUrineSum exceeds the tolerance by 197; mgFeces exceeds the tolerance by 192; mgKidneyTotal exceeds the tolerance by 33; mgIntestineTotal exceeds the tolerance by 56.8
BIOMD0000001029: mLiver exceeds the tolerance by 1.29e+05; mKidneyPlasma exceeds the tolerance by 1.07e+03; mRemainder exceeds the tolerance by 8.89e+04; mPlasmaVenous exceeds the tolerance by 1.54e+04; mHeart exceeds the tolerance by 6.02e+03; mMuscle exceeds the tolerance by 6.03e+05; mAdipose exceeds the tolerance by 6.95e+04; mBrain exceeds the tolerance by 7.7e+03; mFeces exceeds the tolerance by 5.95e+06; mUrineExternal exceeds the tolerance by 6.11e+06; mIntestineLumen exceeds the tolerance by 4.92e+05; mPlasmaArterial exceeds the tolerance by 5.14e+03; mLung exceeds the tolerance by 1.1e+04; mPortalVein exceeds the tolerance by 3.09e+03; mStomach exceeds the tolerance by 3.23e+03; mEnterocytes exceeds the tolerance by 3.76e+05; mKidneyTissue exceeds the tolerance by 6.58e+03; mIntestineVascular exceeds the tolerance by 6.67e+04; mStomachLumen exceeds the tolerance by 1.11e+06; mRBC exceeds the tolerance by 5.95e+03; mKidneyTubular exceeds the tolerance by 2.92e+05; mgStomach exceeds the tolerance by 0.417; mgPortalVein exceeds the tolerance by 0.399; mgUrineSum exceeds the tolerance by 789; mgLiver exceeds the tolerance by 16.6; mgIntestineLumen exceeds the tolerance by 63.6; mgBrain exceeds the tolerance by 0.994; mgLung exceeds the tolerance by 1.42; mgKidneyPlasma exceeds the tolerance by 0.138; mgRemainder exceeds the tolerance by 11.5; mgMuscle exceeds the tolerance by 77.9; mIntestineTotal exceeds the tolerance by 620; mKidneyTotal exceeds the tolerance by 969; mgKidneyTissues exceeds the tolerance by 0.85; mgIntestineVascular exceeds the tolerance by 8.62; mgStomachLumen exceeds the tolerance by 143; mArterialPlasma__kidney exceeds the tolerance by 6.87; mgKidneyTubular exceeds the tolerance by 37.7; mgKidneyTotal exceeds the tolerance by 38.4; mgRBC exceeds the tolerance by 0.768; mgAdipose exceeds the tolerance by 8.97; mgHeart exceeds the tolerance by 0.777; mgFeces exceeds the tolerance by 769; mgEnterocytes exceeds the tolerance by 48.6; mgIntestineTotal exceeds the tolerance by 57.2; mgVenousPlasma exceeds the tolerance by 1.99; mgArterialPlasma exceeds the tolerance by 0.664
BIOMD0000001032: uninfected_cancer_cells exceeds the tolerance by 0.0171; infected_cancer_cells exceeds the tolerance by 0.000117; free_virus exceeds the tolerance by 0.000435; damaged_cancer_cells exceeds the tolerance by 0.00462
BIOMD0000001043: virus_specific_CTLs exceeds the tolerance by 0.000998
BIOMD0000001098: M_methf_c_ exceeds the tolerance by 1; M_xan_c_ exceeds the tolerance by 1; M_quln_c_ exceeds the tolerance by 1; M_o2_c_ exceeds the tolerance by 1; M_ac_e_ exceeds the tolerance by 1; M_tih2cit_c_ exceeds the tolerance by 1; M_citr_L_c_ exceeds the tolerance by 1; M_ppi_c_ exceeds the tolerance by 1; M_3psme_c_ exceeds the tolerance by 1; M_13dpg_c_ exceeds the tolerance by 1; M_alac_S_c_ exceeds the tolerance by 1; M_26dap_M_c_ exceeds the tolerance by 1; M_iletrna_c_ exceeds the tolerance by 1; M_4kfbp_c_ exceeds the tolerance by 1; M_indaccoa_c_ exceeds the tolerance by 1; M_cbl1_c_ exceeds the tolerance by 1; M_copre5_c_ exceeds the tolerance by 1; M_6ax6ax_c_ exceeds the tolerance by 1; M_hacon_T_c_ exceeds the tolerance by 1; M_glyald_c_ exceeds the tolerance by 1; M_36dahx_c_ exceeds the tolerance by 1; M_so4_e_ exceeds the tolerance by 1; M_r15bp_c_ exceeds the tolerance by 1; M_glc_D_c_ exceeds the tolerance by 1; M_gdpfuc_c_ exceeds the tolerance by 1; M_adn_c_ exceeds the tolerance by 1; M_trnaala_c_ exceeds the tolerance by 1; M_trnathr_c_ exceeds the tolerance by 1; M_glyclt_c_ exceeds the tolerance by 1; M_3hdpgpg_c_ exceeds the tolerance by 1; M_4r5au_c_ exceeds the tolerance by 1; M_acglu_c_ exceeds the tolerance by 1; M_formmfr_b__c_ exceeds the tolerance by 1; M_dhadr_c_ exceeds the tolerance by 1; M_co1dam_c_ exceeds the tolerance by 1; M_cdgggp_c_ exceeds the tolerance by 1; M_his_L_c_ exceeds the tolerance by 1; M_caphis_c_ exceeds the tolerance by 1; M_5aop_c_ exceeds the tolerance by 1; M_co2_e_ exceeds the tolerance by 1; M_34hpp_c_ exceeds the tolerance by 1; M_psd5p_c_ exceeds the tolerance by 1; M_aicar_c_ exceeds the tolerance by 1; M_nmn_c_ exceeds the tolerance by 1; M_indpyr_c_ exceeds the tolerance by 1; M_paps_c_ exceeds the tolerance by 1; M_imp_c_ exceeds the tolerance by 1; M_gdpgpi_c_ exceeds the tolerance by 1; M_f390g_c_ exceeds the tolerance by 1; M_3hdggpg_c_ exceeds the tolerance by 1; M_alac_S_e_ exceeds the tolerance by 1; M_g1p_c_ exceeds the tolerance by 1; M_unknown_cbl1deg_c_ exceeds the tolerance by 1; M_imacp_c_ exceeds the tolerance by 1; M_dump_c_ exceeds the tolerance by 1; M_e4p_c_ exceeds the tolerance by 1; M_asp_L_c_ exceeds the tolerance by 1; M_agdpcbi_c_ exceeds the tolerance by 1; M_cbl1_e_ exceeds the tolerance by 1; M_ppp9_c_ exceeds the tolerance by 1; M_4mop_c_ exceeds the tolerance by 1; M_trnaarg_c_ exceeds the tolerance by 1; M_glyald_e_ exceeds the tolerance by 1; M_pac_c_ exceeds the tolerance by 1; M_mma_c_ exceeds the tolerance by 1; M_dhap_c_ exceeds the tolerance by 1; M_ddhrb_c_ exceeds the tolerance by 1; M_h_c_ exceeds the tolerance by 1; M_trptrna_c_ exceeds the tolerance by 1; M_thrp_c_ exceeds the tolerance by 1; M_dggpgp_c_ exceeds the tolerance by 1; M_acg5sa_c_ exceeds the tolerance by 1; M_gdpddman_c_ exceeds the tolerance by 1; M_glu_L_c_ exceeds the tolerance by 1; M_dkfp_c_ exceeds the tolerance by 1; M_prbatp_c_ exceeds the tolerance by 1; M_dhadrdpr_c_ exceeds the tolerance by 1; M_mphenh2_c_ exceeds the tolerance by 1; M_atrz_c_ exceeds the tolerance by 1; M_glyc_c_ exceeds the tolerance by 1; M_2ins_c_ exceeds the tolerance by 1; M_f420_5_c_ exceeds the tolerance by 1; M_gmp_c_ exceeds the tolerance by 1; M_glutrna_gln__c_ exceeds the tolerance by 1; M_3dhq_c_ exceeds the tolerance by 1; M_orn_c_ exceeds the tolerance by 1; M_frdp_c_ exceeds the tolerance by 1; M_carn_c_ exceeds the tolerance by 1; M_sf430a_c_ exceeds the tolerance by 1; M_glntrna_c_ exceeds the tolerance by 1; M_trnaasp_c_ exceeds the tolerance by 1; M_thm_c_ exceeds the tolerance by 1; M_valtrna_c_ exceeds the tolerance by 1; M_asn_L_c_ exceeds the tolerance by 1; M_ppcoa_c_ exceeds the tolerance by 1; M_glu5sa_c_ exceeds the tolerance by 1; M_S2hglut_c_ exceeds the tolerance by 1; M_unknown_cbl1deg_e_ exceeds the tolerance by 1; M_pmcoa_c_ exceeds the tolerance by 1; M_hco3_c_ exceeds the tolerance by 1; M_dtdp4d6dg_c_ exceeds the tolerance by 1; M_nac_c_ exceeds the tolerance by 1; M_dhadrpr_c_ exceeds the tolerance by 1; M_arg_L_c_ exceeds the tolerance by 1; M_trnamet_c_ exceeds the tolerance by 1; M_fprica_c_ exceeds the tolerance by 1; M_ch4_c_ exceeds the tolerance by 1; M_xu5p_D_c_ exceeds the tolerance by 1; M_alatrna_c_ exceeds the tolerance by 1; M_pac_e_ exceeds the tolerance by 1; M_f420_0_c_ exceeds the tolerance by 1; M_mma_e_ exceeds the tolerance by 1; M_ipdp_c_ exceeds the tolerance by 1; M_rb15bp_c_ exceeds the tolerance by 1; M_hcys_L_c_ exceeds the tolerance by 1; M_h_e_ exceeds the tolerance by 1; M_hspmd_c_ exceeds the tolerance by 1; M_mphen_c_ exceeds the tolerance by 1; M_h2acon_C_c_ exceeds the tolerance by 1; M_glu_L_e_ exceeds the tolerance by 1; M_cob_c_ exceeds the tolerance by 1; M_4abz_c_ exceeds the tolerance by 1; M_gam1p_c_ exceeds the tolerance by 1; M_glyc_e_ exceeds the tolerance by 1; M_hom_L_c_ exceeds the tolerance by 1; M_histd_c_ exceeds the tolerance by 1; M_pro_L_c_ exceeds the tolerance by 1; M_adcobhex_c_ exceeds the tolerance by 1; M_dscl_c_ exceeds the tolerance by 1; M_f6p_c_ exceeds the tolerance by 1; M_xmp_c_ exceeds the tolerance by 1; M_fru_c_ exceeds the tolerance by 1; M_trp_L_c_ exceeds the tolerance by 1; M_2pg_c_ exceeds the tolerance by 1; M_mg2_c_ exceeds the tolerance by 1; M_lys_L_c_ exceeds the tolerance by 1; M_thm_e_ exceeds the tolerance by 1; M_lald_L_c_ exceeds the tolerance by 1; M_dhf_c_ exceeds the tolerance by 1; M_5odhf2a_c_ exceeds the tolerance by 1; M_dpgps_c_ exceeds the tolerance by 1; M_dcamp_c_ exceeds the tolerance by 1; M_3hggdp_c_ exceeds the tolerance by 1; M_ahcys_c_ exceeds the tolerance by 1; M_56dthm_c_ exceeds the tolerance by 1; M_s_c_ exceeds the tolerance by 1; M_no2_c_ exceeds the tolerance by 1; M_nac_e_ exceeds the tolerance by 1; M_ohepa_c_ exceeds the tolerance by 1; M_copre6_c_ exceeds the tolerance by 1; M_idp_c_ exceeds the tolerance by 1; M_ch4_e_ exceeds the tolerance by 1; M_dudp_c_ exceeds the tolerance by 1; M_cmp_c_ exceeds the tolerance by 1; M_5dpmev_c_ exceeds the tolerance by 1; M_pram_c_ exceeds the tolerance by 1; M_inost_c_ exceeds the tolerance by 1; M_dmpp_c_ exceeds the tolerance by 1; M_oaa_c_ exceeds the tolerance by 1; M_glcn_c_ exceeds the tolerance by 1; M_fe2_c_ exceeds the tolerance by 1; M_lppg_c_ exceeds the tolerance by 1; M_glu1sa_c_ exceeds the tolerance by 1; M_dha_c_ exceeds the tolerance by 1; M_gcald_c_ exceeds the tolerance by 1; M_uamr_c_ exceeds the tolerance by 1; M_4abz_e_ exceeds the tolerance by 1; M_amob_c_ exceeds the tolerance by 1; M_ihcit_T_c_ exceeds the tolerance by 1; M_cys_L_c_ exceeds the tolerance by 1; M_pro_L_e_ exceeds the tolerance by 1; M_argtrna_c_ exceeds the tolerance by 1; M_2c25dho_c_ exceeds the tolerance by 1; M_mg2_e_ exceeds the tolerance by 1; M_lys_L_e_ exceeds the tolerance by 1; M_hsfd_c_ exceeds the tolerance by 1; M_adocbi_c_ exceeds the tolerance by 1; M_chor_c_ exceeds the tolerance by 1; M_fmn_c_ exceeds the tolerance by 1; M_dgggps_c_ exceeds the tolerance by 1; M_gdp_c_ exceeds the tolerance by 1; M_2dhp_c_ exceeds the tolerance by 1; M_accoa_c_ exceeds the tolerance by 1; M_dms_c_ exceeds the tolerance by 1; M_amp_c_ exceeds the tolerance by 1; M_pppi_c_ exceeds the tolerance by 1; M_25aics_c_ exceeds the tolerance by 1; M_s_e_ exceeds the tolerance by 1; M_fpram_c_ exceeds the tolerance by 1; M_dxyl5p_c_ exceeds the tolerance by 1; M_dhor_S_c_ exceeds the tolerance by 1; M_ile_L_c_ exceeds the tolerance by 1; M_rib_D_c_ exceeds the tolerance by 1; M_4abut_c_ exceeds the tolerance by 1; M_com_c_ exceeds the tolerance by 1; M_f430p1_c_ exceeds the tolerance by 1; M_dpgpi_c_ exceeds the tolerance by 1; M_met_L_c_ exceeds the tolerance by 1; M_2saa_c_ exceeds the tolerance by 1; M_itp_c_ exceeds the tolerance by 1; M_prlp_c_ exceeds the tolerance by 1; M_cl_c_ exceeds the tolerance by 1; M_dtdp4d6dm_c_ exceeds the tolerance by 1; M_thmpp_c_ exceeds the tolerance by 1; M_fald_c_ exceeds the tolerance by 1; M_dutp_c_ exceeds the tolerance by 1; M_glcn_e_ exceeds the tolerance by 1; M_fe2_e_ exceeds the tolerance by 1; M_ni2_c_ exceeds the tolerance by 1; M_gcald_e_ exceeds the tolerance by 1; M_glutrna_c_ exceeds the tolerance by 1; M_ade_c_ exceeds the tolerance by 1; M_f420_6_c_ exceeds the tolerance by 1; M_3c4mop_c_ exceeds the tolerance by 1; M_cys_L_e_ exceeds the tolerance by 1; M_mppp9_c_ exceeds the tolerance by 1; M_succoa_c_ exceeds the tolerance by 1; M_dggpi_c_ exceeds the tolerance by 1; M_ala_L_c_ exceeds the tolerance by 1; M_aspsa_c_ exceeds the tolerance by 1; M_duri_c_ exceeds the tolerance by 1; M_Rh3cit_c_ exceeds the tolerance by 1; M_slp_L_c_ exceeds the tolerance by 1; M_dkmp_c_ exceeds the tolerance by 1; M_asptrna_c_ exceeds the tolerance by 1; M_3hdpgps_c_ exceeds the tolerance by 1; M_dms_e_ exceeds the tolerance by 1; M_nad_c_ exceeds the tolerance by 1; M_4hphac_c_ exceeds the tolerance by 1; M_25dhpp_c_ exceeds the tolerance by 1; M_thmmp_c_ exceeds the tolerance by 1; M_gtp_c_ exceeds the tolerance by 1; M_2ahbut_c_ exceeds the tolerance by 1; M_icit_c_ exceeds the tolerance by 1; M_ile_L_e_ exceeds the tolerance by 1; M_ru5p_D_c_ exceeds the tolerance by 1; M_orot_c_ exceeds the tolerance by 1; M_f420_1_c_ exceeds the tolerance by 1; M_4pasp_c_ exceeds the tolerance by 1; M_5caiz_c_ exceeds the tolerance by 1; M_nadp_c_ exceeds the tolerance by 1; M_cl_e_ exceeds the tolerance by 1; M_10fthf_c_ exceeds the tolerance by 1; M_succ_c_ exceeds the tolerance by 1; M_lystrna_c_ exceeds the tolerance by 1; M_3ig3p_c_ exceeds the tolerance by 1; M_o2__c_ exceeds the tolerance by 1; M_cdp_c_ exceeds the tolerance by 1; M_mfr_b__c_ exceeds the tolerance by 1; M_nh4_c_ exceeds the tolerance by 1; M_etoh_c_ exceeds the tolerance by 1; M_ni2_e_ exceeds the tolerance by 1; M_uppg3_c_ exceeds the tolerance by 1; M_trnagln_c_ exceeds the tolerance by 1; M_fgam_c_ exceeds the tolerance by 1; M_4ppan_c_ exceeds the tolerance by 1; M_acmana_c_ exceeds the tolerance by 1; M_ala_L_e_ exceeds the tolerance by 1; M_air_c_ exceeds the tolerance by 1; M_mev_R_c_ exceeds the tolerance by 1; M_prfp_c_ exceeds the tolerance by 1; M_phetrna_c_ exceeds the tolerance by 1; M_cbi_c_ exceeds the tolerance by 1; M_fmettrna_c_ exceeds the tolerance by 1; M_formh4spt_c_ exceeds the tolerance by 1; M_ala_B_c_ exceeds the tolerance by 1; M_acorn_c_ exceeds the tolerance by 1; M_4hphac_e_ exceeds the tolerance by 1; M_mobd_c_ exceeds the tolerance by 1; M_dhnpt_c_ exceeds the tolerance by 1; M_2ood_c_ exceeds the tolerance by 1; M_gdpofuc_c_ exceeds the tolerance by 1; M_ribflv_c_ exceeds the tolerance by 1; M_adp_c_ exceeds the tolerance by 1; M_mn2_c_ exceeds the tolerance by 1; M_mh4spt_c_ exceeds the tolerance by 1; M_tma_c_ exceeds the tolerance by 1; M_pran_c_ exceeds the tolerance by 1; M_3mop_c_ exceeds the tolerance by 1; M_3hdpgpi_c_ exceeds the tolerance by 1; M_agdpgpi_c_ exceeds the tolerance by 1; M_3hgrdp_c_ exceeds the tolerance by 1; M_phpyr_c_ exceeds the tolerance by 1; M_fe3_c_ exceeds the tolerance by 1; M_mi1p_D_c_ exceeds the tolerance by 1; M_hmgcoa_c_ exceeds the tolerance by 1; M_trnatyr_c_ exceeds the tolerance by 1; M_nh4_e_ exceeds the tolerance by 1; M_dtdpglu_c_ exceeds the tolerance by 1; M_h2s_c_ exceeds the tolerance by 1; M_ctp_c_ exceeds the tolerance by 1; M_copre2_c_ exceeds the tolerance by 1; M_menylh4spt_c_ exceeds the tolerance by 1; M_leutrna_c_ exceeds the tolerance by 1; M_5oxpro_c_ exceeds the tolerance by 1; M_3hdggpi_c_ exceeds the tolerance by 1; M_achms_c_ exceeds the tolerance by 1; M_anth_c_ exceeds the tolerance by 1; M_cbi_e_ exceeds the tolerance by 1; M_4mhetz_c_ exceeds the tolerance by 1; M_f420_2h2_c_ exceeds the tolerance by 1; M_5mta_c_ exceeds the tolerance by 1; M_5hbzid_c_ exceeds the tolerance by 1; M_glycogen_c_ exceeds the tolerance by 1; M_ppa_c_ exceeds the tolerance by 1; M_mobd_e_ exceeds the tolerance by 1; M_f430p2_c_ exceeds the tolerance by 1; M_2plac_L_c_ exceeds the tolerance by 1; M_trnagly_c_ exceeds the tolerance by 1; M_ura_c_ exceeds the tolerance by 1; M_hgbam_c_ exceeds the tolerance by 1; M_ribflv_e_ exceeds the tolerance by 1; M_adocblhbi_c_ exceeds the tolerance by 1; M_mn2_e_ exceeds the tolerance by 1; M_tma_e_ exceeds the tolerance by 1; M_ppbng_c_ exceeds the tolerance by 1; M_nicrnt_c_ exceeds the tolerance by 1; M_atp_c_ exceeds the tolerance by 1; M_fe3_e_ exceeds the tolerance by 1; M_cd2_c_ exceeds the tolerance by 1; M_fdox_c_ exceeds the tolerance by 1; M_f420_7_c_ exceeds the tolerance by 1; M_eig3p_c_ exceeds the tolerance by 1; M_h2s_e_ exceeds the tolerance by 1; M_thr_L_c_ exceeds the tolerance by 1; M_udpg_c_ exceeds the tolerance by 1; M_tsul_c_ exceeds the tolerance by 1; M_fol_c_ exceeds the tolerance by 1; M_urea_c_ exceeds the tolerance by 1; M_amet_c_ exceeds the tolerance by 1; M_gggp_c_ exceeds the tolerance by 1; M_dann_c_ exceeds the tolerance by 1; M_dpgpe_c_ exceeds the tolerance by 1; M_3hcdgggp_c_ exceeds the tolerance by 1; M_uacmam_c_ exceeds the tolerance by 1; M_4ahmmp_c_ exceeds the tolerance by 1; M_gly_c_ exceeds the tolerance by 1; M_6pgl_c_ exceeds the tolerance by 1; M_thrtrna_c_ exceeds the tolerance by 1; M_glyc_R_c_ exceeds the tolerance by 1; M_dcmp_c_ exceeds the tolerance by 1; M_man6p_c_ exceeds the tolerance by 1; M_oxa_c_ exceeds the tolerance by 1; M_dpcoa_c_ exceeds the tolerance by 1; M_2ippm_c_ exceeds the tolerance by 1; M_glu5p_c_ exceeds the tolerance by 1; M_ca2_c_ exceeds the tolerance by 1; M_r5hbzi_c_ exceeds the tolerance by 1; M_f420_2_c_ exceeds the tolerance by 1; M_glyc1p_c_ exceeds the tolerance by 1; M_sl_L_c_ exceeds the tolerance by 1; M_pan4p_c_ exceeds the tolerance by 1; M_nadph_c_ exceeds the tolerance by 1; M_meoh_c_ exceeds the tolerance by 1; M_histrna_c_ exceeds the tolerance by 1; M_trnacys_c_ exceeds the tolerance by 1; M_protrna_c_ exceeds the tolerance by 1; M_sheme_c_ exceeds the tolerance by 1; M_56dura_c_ exceeds the tolerance by 1; M_cd2_e_ exceeds the tolerance by 1; M_mcom_c_ exceeds the tolerance by 1; M_prpp_c_ exceeds the tolerance by 1; M_cbasp_c_ exceeds the tolerance by 1; M_ggdp_c_ exceeds the tolerance by 1; M_r5p_c_ exceeds the tolerance by 1; M_codhpre6_c_ exceeds the tolerance by 1; M_sucsal_c_ exceeds the tolerance by 1; M_na1_c_ exceeds the tolerance by 1; M_cdpg_c_ exceeds the tolerance by 1; M_dgdp_c_ exceeds the tolerance by 1; M_4ampm_c_ exceeds the tolerance by 1; M_tsul_e_ exceeds the tolerance by 1; M_6hmhptpp_c_ exceeds the tolerance by 1; M_3hdggpgp_c_ exceeds the tolerance by 1; M_cmaphis_c_ exceeds the tolerance by 1; M_fol_e_ exceeds the tolerance by 1; M_urea_e_ exceeds the tolerance by 1; M_pap_c_ exceeds the tolerance by 1; M_damp_c_ exceeds the tolerance by 1; M_pyr_c_ exceeds the tolerance by 1; M_6ax_c_ exceeds the tolerance by 1; M_btn_c_ exceeds the tolerance by 1; M_dohdu_c_ exceeds the tolerance by 1; M_zn2_c_ exceeds the tolerance by 1; M_h3acon_C_c_ exceeds the tolerance by 1; M_gly_e_ exceeds the tolerance by 1; M_mmh2mpt_c_ exceeds the tolerance by 1; M_copre8_c_ exceeds the tolerance by 1; M_trnaile_c_ exceeds the tolerance by 1; M_gdpmann_c_ exceeds the tolerance by 1; M_f1p_c_ exceeds the tolerance by 1; M_dtmp_c_ exceeds the tolerance by 1; M_skm_c_ exceeds the tolerance by 1; M_hista_c_ exceeds the tolerance by 1; M_ca2_e_ exceeds the tolerance by 1; M_fum_c_ exceeds the tolerance by 1; M_trnaser_c_ exceeds the tolerance by 1; M_8aonn_c_ exceeds the tolerance by 1; M_ptp_c_ exceeds the tolerance by 1; M_gthox_c_ exceeds the tolerance by 1; M_cystrna_c_ exceeds the tolerance by 1; M_trnaval_c_ exceeds the tolerance by 1; M_ind3ac_c_ exceeds the tolerance by 1; M_7mht_c_ exceeds the tolerance by 1; M_orot5p_c_ exceeds the tolerance by 1; M_meoh_e_ exceeds the tolerance by 1; M_23dhmp_c_ exceeds the tolerance by 1; M_3php_c_ exceeds the tolerance by 1; M_dhpt_c_ exceeds the tolerance by 1; M_pser_L_c_ exceeds the tolerance by 1; M_acg5p_c_ exceeds the tolerance by 1; M_dhrfap_c_ exceeds the tolerance by 1; M_dohau_c_ exceeds the tolerance by 1; M_6hmhpt_c_ exceeds the tolerance by 1; M_3uib_c_ exceeds the tolerance by 1; M_mlthf_c_ exceeds the tolerance by 1; M_ser_L_c_ exceeds the tolerance by 1; M_5pmev_c_ exceeds the tolerance by 1; M_copre3_c_ exceeds the tolerance by 1; M_na1_e_ exceeds the tolerance by 1; M_udpglcur_c_ exceeds the tolerance by 1; M_dtdprmn_c_ exceeds the tolerance by 1; M_3c3hmp_c_ exceeds the tolerance by 1; M_dhpmp_c_ exceeds the tolerance by 1; M_6pthp_c_ exceeds the tolerance by 1; M_25dthpp_c_ exceeds the tolerance by 1; M_dnad_c_ exceeds the tolerance by 1; M_pyr_e_ exceeds the tolerance by 1; M_trnaphe_c_ exceeds the tolerance by 1; M_btn_e_ exceeds the tolerance by 1; M_zn2_e_ exceeds the tolerance by 1; M_dgtp_c_ exceeds the tolerance by 1; M_hphaccoa_c_ exceeds the tolerance by 1; M_3hdpgpe_c_ exceeds the tolerance by 1; M_h2mpt_c_ exceeds the tolerance by 1; M_ptrc_c_ exceeds the tolerance by 1; M_thdp_c_ exceeds the tolerance by 1; M_Rh2cit_c_ exceeds the tolerance by 1; M_for_c_ exceeds the tolerance by 1; M_g6p_c_ exceeds the tolerance by 1; M_tih3cit_c_ exceeds the tolerance by 1; M_f430p3_c_ exceeds the tolerance by 1; M_3pg_c_ exceeds the tolerance by 1; M_ibcoa_c_ exceeds the tolerance by 1; M_skm5p_c_ exceeds the tolerance by 1; M_h2o_c_ exceeds the tolerance by 1; M_s7p_c_ exceeds the tolerance by 1; M_dcdp_c_ exceeds the tolerance by 1; M_k_c_ exceeds the tolerance by 1; M_uacgam_c_ exceeds the tolerance by 1; M_n2_c_ exceeds the tolerance by 1; M_hcit_c_ exceeds the tolerance by 1; M_ind3ac_e_ exceeds the tolerance by 1; M_2pglyc_c_ exceeds the tolerance by 1; M_lac_L_c_ exceeds the tolerance by 1; M_actn_R_c_ exceeds the tolerance by 1; M_pphn_c_ exceeds the tolerance by 1; M_cobya_c_ exceeds the tolerance by 1; M_gar_c_ exceeds the tolerance by 1; M_h2o2_c_ exceeds the tolerance by 1; M_Brfap_c_ exceeds the tolerance by 1; M_gal1p_c_ exceeds the tolerance by 1; M_dhadrtpr_c_ exceeds the tolerance by 1; M_g3p_c_ exceeds the tolerance by 1; M_4ppcys_c_ exceeds the tolerance by 1; M_trnaglu_c_ exceeds the tolerance by 1; M_btamp_c_ exceeds the tolerance by 1; M_co2dam_c_ exceeds the tolerance by 1; M_4hba_c_ exceeds the tolerance by 1; M_sertrna_c_ exceeds the tolerance by 1; M_cit_c_ exceeds the tolerance by 1; M_ch4s_c_ exceeds the tolerance by 1; M_dadp_c_ exceeds the tolerance by 1; M_cobalt2_c_ exceeds the tolerance by 1; M_cbp_c_ exceeds the tolerance by 1; M_cala_c_ exceeds the tolerance by 1; M_f420_3_c_ exceeds the tolerance by 1; M_3hdgggps_c_ exceeds the tolerance by 1; M_trnapro_c_ exceeds the tolerance by 1; M_gthrd_c_ exceeds the tolerance by 1; M_thymd_c_ exceeds the tolerance by 1; M_h2o_e_ exceeds the tolerance by 1; M_3mob_c_ exceeds the tolerance by 1; M_csn_c_ exceeds the tolerance by 1; M_k_e_ exceeds the tolerance by 1; M_dtdp_c_ exceeds the tolerance by 1; M_n2_e_ exceeds the tolerance by 1; M_2dr1p_c_ exceeds the tolerance by 1; M_1pyr5c_c_ exceeds the tolerance by 1; M_ohexa_c_ exceeds the tolerance by 1; M_thym_c_ exceeds the tolerance by 1; M_actn_R_e_ exceeds the tolerance by 1; M_dctp_c_ exceeds the tolerance by 1; M_udpgal_c_ exceeds the tolerance by 1; M_acon_T_c_ exceeds the tolerance by 1; M_3hfrdp_c_ exceeds the tolerance by 1; M_4mpetz_c_ exceeds the tolerance by 1; M_ump_c_ exceeds the tolerance by 1; M_actp_c_ exceeds the tolerance by 1; M_23dhdp_c_ exceeds the tolerance by 1; M_gam6p_c_ exceeds the tolerance by 1; M_hacon_C_c_ exceeds the tolerance by 1; M_so3_c_ exceeds the tolerance by 1; M_h2_c_ exceeds the tolerance by 1; M_tyr_L_c_ exceeds the tolerance by 1; M_acgam1p_c_ exceeds the tolerance by 1; M_cit_e_ exceeds the tolerance by 1; M_2tcc_c_ exceeds the tolerance by 1; M_phaccoa_c_ exceeds the tolerance by 1; M_val_L_c_ exceeds the tolerance by 1; M_gln_L_c_ exceeds the tolerance by 1; M_grdp_c_ exceeds the tolerance by 1; M_m3hdp_c_ exceeds the tolerance by 1; M_gua_c_ exceeds the tolerance by 1; M_sec_c_ exceeds the tolerance by 1; M_fdp_c_ exceeds the tolerance by 1; M_thf_c_ exceeds the tolerance by 1; M_ch4s_e_ exceeds the tolerance by 1; M_argsuc_c_ exceeds the tolerance by 1; M_agm_c_ exceeds the tolerance by 1; M_cobalt2_e_ exceeds the tolerance by 1; M_pant_R_c_ exceeds the tolerance by 1; M_dgggp_c_ exceeds the tolerance by 1; M_2obut_c_ exceeds the tolerance by 1; M_7ohp_c_ exceeds the tolerance by 1; M_dhadrp_c_ exceeds the tolerance by 1; M_5aprbu_c_ exceeds the tolerance by 1; M_iasp_c_ exceeds the tolerance by 1; M_datp_c_ exceeds the tolerance by 1; M_tyrtrna_c_ exceeds the tolerance by 1; M_etha_c_ exceeds the tolerance by 1; M_hmbil_c_ exceeds the tolerance by 1; M_phe_L_c_ exceeds the tolerance by 1; M_fc1p_c_ exceeds the tolerance by 1; M_5aizc_c_ exceeds the tolerance by 1; M_dhp23cp_c_ exceeds the tolerance by 1; M_acetone_c_ exceeds the tolerance by 1; M_dttp_c_ exceeds the tolerance by 1; M_dma_c_ exceeds the tolerance by 1; M_ahdt_c_ exceeds the tolerance by 1; M_nadh_c_ exceeds the tolerance by 1; M_trnatrp_c_ exceeds the tolerance by 1; M_trnalys_c_ exceeds the tolerance by 1; M_copre4_c_ exceeds the tolerance by 1; M_unknown_rbfdeg_c_ exceeds the tolerance by 1; M_h4spt_c_ exceeds the tolerance by 1; M_2mahmp_c_ exceeds the tolerance by 1; M_glytrna_c_ exceeds the tolerance by 1; M_so3_e_ exceeds the tolerance by 1; M_mal_L_c_ exceeds the tolerance by 1; M_h2_e_ exceeds the tolerance by 1; M_pi_c_ exceeds the tolerance by 1; M_5pr5hbz_c_ exceeds the tolerance by 1; M_dmh2mpt_c_ exceeds the tolerance by 1; M_val_L_e_ exceeds the tolerance by 1; M_trnahis_c_ exceeds the tolerance by 1; M_7mhp_c_ exceeds the tolerance by 1; M_pep_c_ exceeds the tolerance by 1; M_ppap_c_ exceeds the tolerance by 1; M_dkdofp_c_ exceeds the tolerance by 1; M_5mthf_c_ exceeds the tolerance by 1; M_adocbip_c_ exceeds the tolerance by 1; M_trnaleu_c_ exceeds the tolerance by 1; M_fdred_c_ exceeds the tolerance by 1; M_co_c_ exceeds the tolerance by 1; M_3spyr_c_ exceeds the tolerance by 1; M_trdox_c_ exceeds the tolerance by 1; M_etha_e_ exceeds the tolerance by 1; M_scl_c_ exceeds the tolerance by 1; M_dtbt_c_ exceeds the tolerance by 1; M_dmlz_c_ exceeds the tolerance by 1; M_3dhsk_c_ exceeds the tolerance by 1; M_leu_L_c_ exceeds the tolerance by 1; M_pnto_R_c_ exceeds the tolerance by 1; M_23dpg_c_ exceeds the tolerance by 1; M_mleneh4spt_c_ exceeds the tolerance by 1; M_f430_c_ exceeds the tolerance by 1; M_prbamp_c_ exceeds the tolerance by 1; M_dma_e_ exceeds the tolerance by 1; M_cu2_c_ exceeds the tolerance by 1; M_unknown_rbfdeg_e_ exceeds the tolerance by 1; M_appl_c_ exceeds the tolerance by 1; M_dpgpg_c_ exceeds the tolerance by 1; M_cbl1hbi_c_ exceeds the tolerance by 1; M_2ppoh_c_ exceeds the tolerance by 1; M_udp_c_ exceeds the tolerance by 1; M_adcobdam_c_ exceeds the tolerance by 1; M_pi_e_ exceeds the tolerance by 1; M_akg_c_ exceeds the tolerance by 1; M_camp_c_ exceeds the tolerance by 1; M_f390a_c_ exceeds the tolerance by 1; M_glyb_c_ exceeds the tolerance by 1; M_phom_c_ exceeds the tolerance by 1; M_2cpr5p_c_ exceeds the tolerance by 1; M_f420_4_c_ exceeds the tolerance by 1; M_hatrz_c_ exceeds the tolerance by 1; M_5mdr1p_c_ exceeds the tolerance by 1; M_co_e_ exceeds the tolerance by 1; M_dggpg_c_ exceeds the tolerance by 1; M_ac_c_ exceeds the tolerance by 1; M_3hdgggp_c_ exceeds the tolerance by 1; M_hisp_c_ exceeds the tolerance by 1; M_uaccg_c_ exceeds the tolerance by 1; M_23dhmb_c_ exceeds the tolerance by 1; M_acald_c_ exceeds the tolerance by 1; M_aacoa_c_ exceeds the tolerance by 1; M_acser_c_ exceeds the tolerance by 1; M_aconm_c_ exceeds the tolerance by 1; M_leu_L_e_ exceeds the tolerance by 1; M_pnto_R_e_ exceeds the tolerance by 1; M_man1p_c_ exceeds the tolerance by 1; M_Shcit_c_ exceeds the tolerance by 1; M_nabl_c_ exceeds the tolerance by 1; M_cu2_e_ exceeds the tolerance by 1; M_hxan_c_ exceeds the tolerance by 1; M_so4_c_ exceeds the tolerance by 1; M_db4p_c_ exceeds the tolerance by 1; M_indole_c_ exceeds the tolerance by 1; M_cbl1hbi_e_ exceeds the tolerance by 1; M_3c2hmp_c_ exceeds the tolerance by 1; M_applp_c_ exceeds the tolerance by 1; M_mettrna_c_ exceeds the tolerance by 1; M_h4mpt_c_ exceeds the tolerance by 1; M_coa_c_ exceeds the tolerance by 1; M_utp_c_ exceeds the tolerance by 1; M_co2_c_ exceeds the tolerance by 1; M_glyb_e_ exceeds the tolerance by 1; M_trdrd_c_ exceeds the tolerance by 1
BIOMD0000001099: M_cpd02255_c0 exceeds the tolerance by 1; M_cpd00067_c0 exceeds the tolerance by 1; M_cpd00011_c0 exceeds the tolerance by 1; M_cpd00938_c0 exceeds the tolerance by 1; M_cpd02152_c0 exceeds the tolerance by 1; M_cpd00106_c0 exceeds the tolerance by 1; M_cpd00051_c0 exceeds the tolerance by 1; M_cpd03671_c0 exceeds the tolerance by 1; M_cpd02611_c0 exceeds the tolerance by 1; M_cpd00010_c0 exceeds the tolerance by 1; M_cpd00022_c0 exceeds the tolerance by 1; M_cpd11420_c0 exceeds the tolerance by 1; M_cpd00790_c0 exceeds the tolerance by 1; M_cpd00135_c0 exceeds the tolerance by 1; M_cpd00081_c0 exceeds the tolerance by 1; M_cpd00029_c0 exceeds the tolerance by 1; M_cpd00268_c0 exceeds the tolerance by 1; M_cpd11421_c0 exceeds the tolerance by 1; M_cpd00060_c0 exceeds the tolerance by 1; M_cpd00001_c0 exceeds the tolerance by 1; M_cpd00035_c0 exceeds the tolerance by 1; M_cpd11590_c0 exceeds the tolerance by 1; M_cpd00161_c0 exceeds the tolerance by 1; M_cpd11582_c0 exceeds the tolerance by 1; M_cpd03761_c0 exceeds the tolerance by 1; M_cpd00006_c0 exceeds the tolerance by 1; M_cpd03760_c0 exceeds the tolerance by 1; M_cpd00005_c0 exceeds the tolerance by 1; M_cpd00254_e0 exceeds the tolerance by 1; M_cpd00254_c0 exceeds the tolerance by 1; M_cpd00036_c0 exceeds the tolerance by 1; M_cpd02857_c0 exceeds the tolerance by 1; M_cpd00699_c0 exceeds the tolerance by 1; M_cpd00009_c0 exceeds the tolerance by 1; M_cpd03519_c0 exceeds the tolerance by 1; M_cpd03518_c0 exceeds the tolerance by 1; M_cpd00047_c0 exceeds the tolerance by 1; M_cpd02555_c0 exceeds the tolerance by 1; M_cpd02738_c0 exceeds the tolerance by 1; M_cpd00130_c0 exceeds the tolerance by 1; M_cpd00032_c0 exceeds the tolerance by 1; M_cpd00004_c0 exceeds the tolerance by 1; M_cpd00003_c0 exceeds the tolerance by 1; M_cpd00346_c0 exceeds the tolerance by 1; M_cpd00227_c0 exceeds the tolerance by 1; M_cpd02656_c0 exceeds the tolerance by 1; M_cpd02882_c0 exceeds the tolerance by 1; M_cpd00220_c0 exceeds the tolerance by 1; M_cpd02893_c0 exceeds the tolerance by 1; M_cpd00002_c0 exceeds the tolerance by 1; M_cpd00008_c0 exceeds the tolerance by 1; M_cpd02140_c0 exceeds the tolerance by 1; M_cpd00242_c0 exceeds the tolerance by 1; M_cpd11589_c0 exceeds the tolerance by 1; M_cpd00041_c0 exceeds the tolerance by 1; M_cpd00033_c0 exceeds the tolerance by 1; M_cpd00840_c0 exceeds the tolerance by 1; M_cpd00039_c0 exceeds the tolerance by 1; M_cpd14960_c0 exceeds the tolerance by 1; M_cpd08371_c0 exceeds the tolerance by 1; M_cpd00071_c0 exceeds the tolerance by 1; M_cpd00123_c0 exceeds the tolerance by 1; M_cpd01646_c0 exceeds the tolerance by 1; M_cpd00239_c0 exceeds the tolerance by 1; M_cpd15693_c0 exceeds the tolerance by 1; M_cpd00054_c0 exceeds the tolerance by 1; M_cpd00046_c0 exceeds the tolerance by 1; M_cpd15687_c0 exceeds the tolerance by 1; M_cpd00557_c0 exceeds the tolerance by 1; M_cpd03426_c0 exceeds the tolerance by 1; M_cpd10515_c0 exceeds the tolerance by 1; M_cpd00061_c0 exceeds the tolerance by 1; M_cpd00482_c0 exceeds the tolerance by 1; M_cpd15682_c0 exceeds the tolerance by 1; M_cpd15688_c0 exceeds the tolerance by 1; M_cpd00012_c0 exceeds the tolerance by 1; M_cpd00052_c0 exceeds the tolerance by 1; M_cpd15421_c0 exceeds the tolerance by 1; M_cpd15526_c0 exceeds the tolerance by 1; M_cpd02069_c0 exceeds the tolerance by 1; M_cpd00169_c0 exceeds the tolerance by 1; M_cpd00038_c0 exceeds the tolerance by 1; M_cpd00009_e0 exceeds the tolerance by 1; M_cpd02333_c0 exceeds the tolerance by 1; M_cpd03470_c0 exceeds the tolerance by 1; M_cpd00095_c0 exceeds the tolerance by 1; M_cpd08366_c0 exceeds the tolerance by 1; M_cpd02826_c0 exceeds the tolerance by 1; M_cpd00072_c0 exceeds the tolerance by 1; M_cpd00079_c0 exceeds the tolerance by 1; M_cpd00118_c0 exceeds the tolerance by 1; M_cpd00147_c0 exceeds the tolerance by 1; M_cpd00264_c0 exceeds the tolerance by 1; M_cpd00837_c0 exceeds the tolerance by 1; M_cpd00013_c0 exceeds the tolerance by 1; M_cpd00023_c0 exceeds the tolerance by 1; M_cpd00053_c0 exceeds the tolerance by 1; M_cpd00238_c0 exceeds the tolerance by 1; M_cpd00102_c0 exceeds the tolerance by 1; M_cpd00198_c0 exceeds the tolerance by 1; M_cpd00101_c0 exceeds the tolerance by 1; M_cpd00115_c0 exceeds the tolerance by 1; M_cpd00246_c0 exceeds the tolerance by 1; M_cpd00114_c0 exceeds the tolerance by 1; M_cpd00084_c0 exceeds the tolerance by 1; M_cpd15603_c0 exceeds the tolerance by 1; M_cpd00358_c0 exceeds the tolerance by 1; M_cpd00978_c0 exceeds the tolerance by 1; M_cpd15555_c0 exceeds the tolerance by 1; M_cpd15419_c0 exceeds the tolerance by 1; M_cpd00357_c0 exceeds the tolerance by 1; M_cpd00297_c0 exceeds the tolerance by 1; M_cpd00655_c0 exceeds the tolerance by 1; M_cpd00343_c0 exceeds the tolerance by 1; M_cpd00146_c0 exceeds the tolerance by 1; M_cpd00200_c0 exceeds the tolerance by 1; M_cpd00024_c0 exceeds the tolerance by 1; M_cpd00107_c0 exceeds the tolerance by 1; M_cpd01777_c0 exceeds the tolerance by 1; M_cpd01775_c0 exceeds the tolerance by 1; M_cpd00834_c0 exceeds the tolerance by 1; M_cpd02666_c0 exceeds the tolerance by 1; M_cpd02979_c0 exceeds the tolerance by 1; M_cpd02991_c0 exceeds the tolerance by 1; M_cpd00290_c0 exceeds the tolerance by 1; M_cpd00918_c0 exceeds the tolerance by 1; M_cpd00342_c0 exceeds the tolerance by 1; M_cpd11586_c0 exceeds the tolerance by 1; M_cpd00067_e0 exceeds the tolerance by 1; M_cpd00205_e0 exceeds the tolerance by 1; M_cpd00205_c0 exceeds the tolerance by 1; M_cpd00018_c0 exceeds the tolerance by 1; M_cpd03078_c0 exceeds the tolerance by 1; M_cpd01078_c0 exceeds the tolerance by 1; M_cpd00091_c0 exceeds the tolerance by 1; M_cpd00810_c0 exceeds the tolerance by 1; M_cpd00019_c0 exceeds the tolerance by 1; M_cpd01620_c0 exceeds the tolerance by 1; M_cpd00017_c0 exceeds the tolerance by 1; M_cpd03420_c0 exceeds the tolerance by 1; M_cpd14961_c0 exceeds the tolerance by 1; M_cpd08375_c0 exceeds the tolerance by 1; M_cpd00092_c0 exceeds the tolerance by 1; M_cpd00307_c0 exceeds the tolerance by 1; M_cpd15747_c0 exceeds the tolerance by 1; M_cpd00014_c0 exceeds the tolerance by 1; M_cpd15765_c0 exceeds the tolerance by 1; M_cpd00037_c0 exceeds the tolerance by 1; M_cpd11436_c0 exceeds the tolerance by 1; M_cpd11437_c0 exceeds the tolerance by 1; M_cpd01997_c0 exceeds the tolerance by 1; M_cpd00218_c0 exceeds the tolerance by 1; M_cpd00873_c0 exceeds the tolerance by 1; M_cpd02904_c0 exceeds the tolerance by 1; M_cpd03496_c0 exceeds the tolerance by 1; M_cpd03495_c0 exceeds the tolerance by 1; M_cpd11621_c0 exceeds the tolerance by 1; M_cpd11620_c0 exceeds the tolerance by 1; M_cpd08369_c0 exceeds the tolerance by 1; M_cpd08368_c0 exceeds the tolerance by 1; M_cpd17041_c0 exceeds the tolerance by 1; M_cpd03492_c0 exceeds the tolerance by 1; M_cpd03491_c0 exceeds the tolerance by 1; M_cpd02210_c0 exceeds the tolerance by 1; M_cpd00359_c0 exceeds the tolerance by 1; M_cpd02720_c0 exceeds the tolerance by 1; M_cpd00931_c0 exceeds the tolerance by 1; M_cpd15768_c0 exceeds the tolerance by 1; M_cpd15750_c0 exceeds the tolerance by 1; M_cpd00113_c0 exceeds the tolerance by 1; M_cpd00289_c0 exceeds the tolerance by 1; M_cpd00350_c0 exceeds the tolerance by 1; M_cpd02498_c0 exceeds the tolerance by 1; M_cpd00809_c0 exceeds the tolerance by 1; M_cpd00361_c0 exceeds the tolerance by 1; M_cpd00668_c0 exceeds the tolerance by 1; M_cpd00062_c0 exceeds the tolerance by 1; M_cpd00288_c0 exceeds the tolerance by 1; M_cpd02775_c0 exceeds the tolerance by 1; M_cpd00939_c0 exceeds the tolerance by 1; M_cpd00868_c0 exceeds the tolerance by 1; M_cpd00069_c0 exceeds the tolerance by 1; M_cpd00209_c0 exceeds the tolerance by 1; M_cpd00209_e0 exceeds the tolerance by 1; M_cpd03421_c0 exceeds the tolerance by 1; M_cpd17042_c0 exceeds the tolerance by 1; M_cpd00149_c0 exceeds the tolerance by 1; M_cpd00504_c0 exceeds the tolerance by 1; M_cpd00516_c0 exceeds the tolerance by 1; M_cpd00132_c0 exceeds the tolerance by 1; M_cpd11581_c0 exceeds the tolerance by 1; M_cpd02978_c0 exceeds the tolerance by 1; M_cpd00177_c0 exceeds the tolerance by 1; M_cpd02737_c0 exceeds the tolerance by 1; M_cpd02438_c0 exceeds the tolerance by 1; M_cpd00895_c0 exceeds the tolerance by 1; M_cpd02246_c0 exceeds the tolerance by 1; M_cpd00117_c0 exceeds the tolerance by 1; M_cpd00128_c0 exceeds the tolerance by 1; M_cpd02574_c0 exceeds the tolerance by 1; M_cpd15684_c0 exceeds the tolerance by 1; M_cpd15678_c0 exceeds the tolerance by 1; M_cpd02201_c0 exceeds the tolerance by 1; M_cpd00508_c0 exceeds the tolerance by 1; M_cpd02535_c0 exceeds the tolerance by 1; M_cpd00930_c0 exceeds the tolerance by 1; M_cpd00807_c0 exceeds the tolerance by 1; M_cpd00015_c0 exceeds the tolerance by 1; M_cpd00982_c0 exceeds the tolerance by 1; M_cpd08372_c0 exceeds the tolerance by 1; M_cpd00956_c0 exceeds the tolerance by 1; M_cpd00286_c0 exceeds the tolerance by 1; M_cpd00086_c0 exceeds the tolerance by 1; M_cpd00141_c0 exceeds the tolerance by 1; M_cpd00236_c0 exceeds the tolerance by 1; M_cpd03706_c0 exceeds the tolerance by 1; M_cpd00274_c0 exceeds the tolerance by 1; M_cpd00171_c0 exceeds the tolerance by 1; M_cpd15422_c0 exceeds the tolerance by 1; M_cpd15523_c0 exceeds the tolerance by 1; M_cpd00096_c0 exceeds the tolerance by 1; M_cpd01716_c0 exceeds the tolerance by 1; M_cpd08211_c0 exceeds the tolerance by 1; M_cpd02605_c0 exceeds the tolerance by 1; M_cpd02693_c0 exceeds the tolerance by 1; M_cpd03608_c0 exceeds the tolerance by 1; M_cpd03607_c0 exceeds the tolerance by 1; M_cpd00299_c0 exceeds the tolerance by 1; M_cpd00338_c0 exceeds the tolerance by 1; M_cpd00689_c0 exceeds the tolerance by 1; M_cpd03835_c0 exceeds the tolerance by 1; M_cpd00065_c0 exceeds the tolerance by 1; M_cpd00644_c0 exceeds the tolerance by 1; M_cpd15554_c0 exceeds the tolerance by 1; M_cpd00863_c0 exceeds the tolerance by 1; M_cpd10162_c0 exceeds the tolerance by 1; M_cpd00533_c0 exceeds the tolerance by 1; M_cpd00356_c0 exceeds the tolerance by 1; M_cpd15604_c0 exceeds the tolerance by 1; M_cpd02884_c0 exceeds the tolerance by 1; M_cpd00175_c0 exceeds the tolerance by 1; M_cpd02569_c0 exceeds the tolerance by 1; M_cpd00206_c0 exceeds the tolerance by 1; M_cpd03834_c0 exceeds the tolerance by 1; M_cpd03839_c0 exceeds the tolerance by 1; M_cpd00219_c0 exceeds the tolerance by 1; M_cpd00616_c0 exceeds the tolerance by 1; M_cpd15524_c0 exceeds the tolerance by 1; M_cpd15420_c0 exceeds the tolerance by 1; M_cpd15527_c0 exceeds the tolerance by 1; M_cpd00016_c0 exceeds the tolerance by 1; M_cpd00971_c0 exceeds the tolerance by 1; M_cpd00971_e0 exceeds the tolerance by 1; M_cpd00129_c0 exceeds the tolerance by 1; M_cpd00129_e0 exceeds the tolerance by 1; M_cpd15557_c0 exceeds the tolerance by 1; M_cpd00203_c0 exceeds the tolerance by 1; M_cpd00812_c0 exceeds the tolerance by 1; M_cpd00332_c0 exceeds the tolerance by 1; M_cpd00143_c0 exceeds the tolerance by 1; M_cpd03560_c0 exceeds the tolerance by 1; M_cpd00793_c0 exceeds the tolerance by 1; M_cpd02894_c0 exceeds the tolerance by 1; M_cpd02654_c0 exceeds the tolerance by 1; M_cpd00782_c0 exceeds the tolerance by 1; M_cpd01727_c0 exceeds the tolerance by 1; M_cpd11585_c0 exceeds the tolerance by 1; M_cpd15754_c0 exceeds the tolerance by 1; M_cpd15772_c0 exceeds the tolerance by 1; M_cpd00103_c0 exceeds the tolerance by 1; M_cpd15748_c0 exceeds the tolerance by 1; M_cpd15766_c0 exceeds the tolerance by 1; M_cpd11593_c0 exceeds the tolerance by 1; M_cpd11440_c0 exceeds the tolerance by 1; M_cpd11441_c0 exceeds the tolerance by 1; M_cpd03666_c0 exceeds the tolerance by 1; M_cpd00448_c0 exceeds the tolerance by 1; M_cpd00100_c0 exceeds the tolerance by 1; M_cpd00638_c0 exceeds the tolerance by 1; M_cpd02851_c0 exceeds the tolerance by 1; M_cpd02921_c0 exceeds the tolerance by 1; M_cpd00142_c0 exceeds the tolerance by 1; M_cpd00279_c0 exceeds the tolerance by 1; M_cpd00020_c0 exceeds the tolerance by 1; M_cpd00093_c0 exceeds the tolerance by 1; M_cpd00216_c0 exceeds the tolerance by 1; M_cpd01017_c0 exceeds the tolerance by 1; M_cpd00213_c0 exceeds the tolerance by 1; M_cpd00449_c0 exceeds the tolerance by 1; M_cpd15692_c0 exceeds the tolerance by 1; M_cpd15686_c0 exceeds the tolerance by 1; M_cpd00859_c0 exceeds the tolerance by 1; M_cpd11580_c0 exceeds the tolerance by 1; M_cpd00025_c0 exceeds the tolerance by 1; M_cpd00932_c0 exceeds the tolerance by 1; M_cpd03049_c0 exceeds the tolerance by 1; M_cpd00498_c0 exceeds the tolerance by 1; M_cpd00056_c0 exceeds the tolerance by 1; M_cpd00094_c0 exceeds the tolerance by 1; M_cpd00282_c0 exceeds the tolerance by 1; M_cpd00247_c0 exceeds the tolerance by 1; M_cpd15685_c0 exceeds the tolerance by 1; M_cpd15679_c0 exceeds the tolerance by 1; M_cpd02817_c0 exceeds the tolerance by 1; M_cpd02935_c0 exceeds the tolerance by 1; M_cpd00735_c0 exceeds the tolerance by 1; M_cpd00643_c0 exceeds the tolerance by 1; M_cpd00774_c0 exceeds the tolerance by 1; M_cpd00957_c0 exceeds the tolerance by 1; M_cpd00210_c0 exceeds the tolerance by 1; M_cpd00210_e0 exceeds the tolerance by 1; M_cpd02791_c0 exceeds the tolerance by 1; M_cpd17043_c0 exceeds the tolerance by 1; M_cpd00666_c0 exceeds the tolerance by 1; M_cpd02345_c0 exceeds the tolerance by 1; M_cpd00528_c0 exceeds the tolerance by 1; M_cpd11640_c0 exceeds the tolerance by 1; M_cpd00792_c0 exceeds the tolerance by 1; M_cpd00649_c0 exceeds the tolerance by 1; M_cpd00136_c0 exceeds the tolerance by 1; M_cpd02678_c0 exceeds the tolerance by 1; M_cpd00492_c0 exceeds the tolerance by 1; M_cpd11432_c0 exceeds the tolerance by 1; M_cpd11431_c0 exceeds the tolerance by 1; M_cpd00053_e0 exceeds the tolerance by 1; M_cpd00298_c0 exceeds the tolerance by 1; M_cpd02030_c0 exceeds the tolerance by 1; M_cpd00322_c0 exceeds the tolerance by 1; M_cpd15553_c0 exceeds the tolerance by 1; M_cpd15423_c0 exceeds the tolerance by 1; M_cpd00540_c0 exceeds the tolerance by 1; M_cpd00540_e0 exceeds the tolerance by 1; M_cpd00251_c0 exceeds the tolerance by 1; M_cpd00068_c0 exceeds the tolerance by 1; M_cpd00090_c0 exceeds the tolerance by 1; M_cpd00151_c0 exceeds the tolerance by 1; M_cpd01587_c0 exceeds the tolerance by 1; M_cpd15690_c0 exceeds the tolerance by 1; M_cpd00066_c0 exceeds the tolerance by 1; M_cpd15605_c0 exceeds the tolerance by 1; M_cpd00226_c0 exceeds the tolerance by 1; M_cpd00226_e0 exceeds the tolerance by 1; M_cpd01710_c0 exceeds the tolerance by 1; M_cpd00202_c0 exceeds the tolerance by 1; M_cpd03091_c0 exceeds the tolerance by 1; M_cpd01311_c0 exceeds the tolerance by 1; M_cpd00104_c0 exceeds the tolerance by 1; M_cpd00074_c0 exceeds the tolerance by 1; M_cpd02375_c0 exceeds the tolerance by 1; M_cpd00241_c0 exceeds the tolerance by 1; M_cpd01324_c0 exceeds the tolerance by 1; M_cpd00119_c0 exceeds the tolerance by 1; M_cpd01080_c0 exceeds the tolerance by 1; M_cpd00327_c0 exceeds the tolerance by 1; M_cpd15522_c0 exceeds the tolerance by 1; M_cpd10515_e0 exceeds the tolerance by 1; M_cpd00641_c0 exceeds the tolerance by 1; M_cpd08928_c0 exceeds the tolerance by 1; M_cpd02547_c0 exceeds the tolerance by 1; M_cpd03914_c0 exceeds the tolerance by 1; M_cpd11584_c0 exceeds the tolerance by 1; M_cpd11430_c0 exceeds the tolerance by 1; M_cpd11435_c0 exceeds the tolerance by 1; M_cpd08373_c0 exceeds the tolerance by 1; M_cpd00099_c0 exceeds the tolerance by 1; M_cpd00099_e0 exceeds the tolerance by 1; M_cpd00047_e0 exceeds the tolerance by 1; M_cpd11592_c0 exceeds the tolerance by 1; M_cpd08370_c0 exceeds the tolerance by 1; M_cpd01982_c0 exceeds the tolerance by 1; M_cpd00755_c0 exceeds the tolerance by 1; M_cpd02843_c0 exceeds the tolerance by 1; M_cpd00497_c0 exceeds the tolerance by 1; M_cpd11587_c0 exceeds the tolerance by 1; M_cpd11225_c0 exceeds the tolerance by 1; M_cpd02679_c0 exceeds the tolerance by 1; M_cpd00800_c0 exceeds the tolerance by 1; M_cpd00355_c0 exceeds the tolerance by 1; M_cpd15683_c0 exceeds the tolerance by 1; M_cpd15689_c0 exceeds the tolerance by 1; M_cpd11438_c0 exceeds the tolerance by 1; M_cpd11439_c0 exceeds the tolerance by 1; M_cpd15680_c0 exceeds the tolerance by 1; M_cpd00078_c0 exceeds the tolerance by 1; M_cpd15746_c0 exceeds the tolerance by 1; M_cpd15764_c0 exceeds the tolerance by 1; M_cpd00477_c0 exceeds the tolerance by 1; M_cpd00026_c0 exceeds the tolerance by 1; M_cpd00144_c0 exceeds the tolerance by 1; M_cpd02394_c0 exceeds the tolerance by 1; M_cpd00383_c0 exceeds the tolerance by 1; M_cpd00363_c0 exceeds the tolerance by 1; M_cpd11912_c0 exceeds the tolerance by 1; M_cpd12227_c0 exceeds the tolerance by 1; M_cpd01024_c0 exceeds the tolerance by 1; M_cpd15751_c0 exceeds the tolerance by 1; M_cpd15769_c0 exceeds the tolerance by 1; M_cpd02642_c0 exceeds the tolerance by 1; M_cpd11434_c0 exceeds the tolerance by 1; M_cpd11433_c0 exceeds the tolerance by 1; M_cpd01695_c0 exceeds the tolerance by 1; M_cpd03847_c0 exceeds the tolerance by 1; M_cpd00307_e0 exceeds the tolerance by 1; M_cpd02552_c0 exceeds the tolerance by 1; M_cpd15417_c0 exceeds the tolerance by 1; M_cpd15552_c0 exceeds the tolerance by 1; M_cpd00822_c0 exceeds the tolerance by 1; M_cpd03833_c0 exceeds the tolerance by 1; M_cpd08210_c0 exceeds the tolerance by 1; M_cpd15606_c0 exceeds the tolerance by 1; M_cpd00334_c0 exceeds the tolerance by 1; M_cpd00806_c0 exceeds the tolerance by 1; M_cpd00156_c0 exceeds the tolerance by 1; M_cpd00134_c0 exceeds the tolerance by 1; M_cpd00214_c0 exceeds the tolerance by 1; M_cpd15767_c0 exceeds the tolerance by 1; M_cpd15749_c0 exceeds the tolerance by 1; M_cpd00031_c0 exceeds the tolerance by 1; M_cpd00861_c0 exceeds the tolerance by 1; M_cpd00446_c0 exceeds the tolerance by 1; M_cpd00182_c0 exceeds the tolerance by 1; M_cpd00292_c0 exceeds the tolerance by 1; M_cpd01977_c0 exceeds the tolerance by 1; M_cpd00283_c0 exceeds the tolerance by 1; M_cpd03487_c0 exceeds the tolerance by 1; M_cpd03488_c0 exceeds the tolerance by 1; M_cpd00089_c0 exceeds the tolerance by 1; M_cpd15302_c0 exceeds the tolerance by 1; M_cpd00155_c0 exceeds the tolerance by 1; M_cpd03913_c0 exceeds the tolerance by 1; M_cpd03832_c0 exceeds the tolerance by 1; M_cpd00764_c0 exceeds the tolerance by 1; M_cpd11588_c0 exceeds the tolerance by 1; M_cpd02655_c0 exceeds the tolerance by 1; M_cpd00936_c0 exceeds the tolerance by 1; M_cpd11583_c0 exceeds the tolerance by 1; M_cpd15521_c0 exceeds the tolerance by 1; M_cpd00043_c0 exceeds the tolerance by 1; M_cpd00092_e0 exceeds the tolerance by 1; M_cpd15691_c0 exceeds the tolerance by 1; M_cpd15269_c0 exceeds the tolerance by 1; M_cpd15274_c0 exceeds the tolerance by 1; M_cpd11591_c0 exceeds the tolerance by 1; M_cpd15753_c0 exceeds the tolerance by 1; M_cpd15771_c0 exceeds the tolerance by 1; M_cpd01914_c0 exceeds the tolerance by 1; M_cpd15558_c0 exceeds the tolerance by 1; M_cpd02701_c0 exceeds the tolerance by 1; M_cpd00149_e0 exceeds the tolerance by 1; M_cpd15556_c0 exceeds the tolerance by 1; M_cpd15418_c0 exceeds the tolerance by 1; M_cpd00521_c0 exceeds the tolerance by 1; M_cpd02616_c0 exceeds the tolerance by 1; M_cpd12005_c0 exceeds the tolerance by 1; M_cpd12225_c0 exceeds the tolerance by 1; M_cpd15681_c0 exceeds the tolerance by 1; M_cpd15694_c0 exceeds the tolerance by 1; M_cpd00064_c0 exceeds the tolerance by 1; M_cpd15525_c0 exceeds the tolerance by 1; M_cpd00946_c0 exceeds the tolerance by 1; M_cpd00126_c0 exceeds the tolerance by 1; M_cpd00311_c0 exceeds the tolerance by 1; M_cpd00485_c0 exceeds the tolerance by 1; M_cpd00235_c0 exceeds the tolerance by 1; M_cpd00305_c0 exceeds the tolerance by 1; M_cpd00305_e0 exceeds the tolerance by 1; M_cpd00295_c0 exceeds the tolerance by 1; M_cpd00073_c0 exceeds the tolerance by 1; M_cpd00073_e0 exceeds the tolerance by 1; M_cpd15238_c0 exceeds the tolerance by 1; M_cpd15237_c0 exceeds the tolerance by 1; M_cpd00830_c0 exceeds the tolerance by 1; M_cpd01974_c0 exceeds the tolerance by 1; M_cpd00712_c0 exceeds the tolerance by 1; M_cpd00408_c0 exceeds the tolerance by 1; M_cpd02636_c0 exceeds the tolerance by 1; M_cpd00367_c0 exceeds the tolerance by 1; M_cpd00738_c0 exceeds the tolerance by 1; M_cpd15770_c0 exceeds the tolerance by 1; M_cpd15752_c0 exceeds the tolerance by 1; M_cpd15677_c0 exceeds the tolerance by 1; M_cpd00152_c0 exceeds the tolerance by 1; M_cpd10516_c0 exceeds the tolerance by 1; M_cpd10516_e0 exceeds the tolerance by 1; M_cpd00001_e0 exceeds the tolerance by 1; M_cpd00011_e0 exceeds the tolerance by 1; M_cpd02465_c0 exceeds the tolerance by 1; M_cpd02211_c0 exceeds the tolerance by 1; M_cpd00058_c0 exceeds the tolerance by 1; M_cpd00042_c0 exceeds the tolerance by 1; M_cpd12370_c0 exceeds the tolerance by 1; M_cpd11416_c0 exceeds the tolerance by 1; M_cpd00063_c0 exceeds the tolerance by 1; M_cpd03422_c0 exceeds the tolerance by 1; M_cpd00166_c0 exceeds the tolerance by 1; M_cpd11493_c0 exceeds the tolerance by 1; M_cpd03443_c0 exceeds the tolerance by 1; M_cpd03444_c0 exceeds the tolerance by 1; M_cpd11524_c0 exceeds the tolerance by 1; M_cpd01772_c0 exceeds the tolerance by 1; M_cpd03451_c0 exceeds the tolerance by 1; M_cpd00421_c0 exceeds the tolerance by 1; M_cpd11492_c0 exceeds the tolerance by 1; M_cpd11525_c0 exceeds the tolerance by 1; M_cpd00034_e0 exceeds the tolerance by 1; M_cpd11496_c0 exceeds the tolerance by 1; M_cpd11495_c0 exceeds the tolerance by 1; M_cpd02083_c0 exceeds the tolerance by 1; M_cpd00817_c0 exceeds the tolerance by 1; M_cpd11515_c0 exceeds the tolerance by 1; M_cpd01741_e0 exceeds the tolerance by 1; M_cpd11488_c0 exceeds the tolerance by 1; M_cpd15268_c0 exceeds the tolerance by 1; M_cpd01270_c0 exceeds the tolerance by 1; M_cpd04122_c0 exceeds the tolerance by 1; M_cpd00050_c0 exceeds the tolerance by 1; M_cpd00027_c0 exceeds the tolerance by 1; M_cpd11532_c0 exceeds the tolerance by 1; M_cpd00080_c0 exceeds the tolerance by 1; M_cpd11533_c0 exceeds the tolerance by 1; M_cpd03918_c0 exceeds the tolerance by 1; M_cpd00355_e0 exceeds the tolerance by 1; M_cpd00626_c0 exceeds the tolerance by 1; M_cpd02120_c0 exceeds the tolerance by 1; M_cpd03448_c0 exceeds the tolerance by 1; M_cpd11516_c0 exceeds the tolerance by 1; M_cpd11507_c0 exceeds the tolerance by 1; M_cpd11508_c0 exceeds the tolerance by 1; M_cpd11504_c0 exceeds the tolerance by 1; M_cpd03447_c0 exceeds the tolerance by 1; M_cpd00058_e0 exceeds the tolerance by 1; M_cpd00906_c0 exceeds the tolerance by 1; M_cpd11540_c0 exceeds the tolerance by 1; M_cpd00760_c0 exceeds the tolerance by 1; M_cpd11499_c0 exceeds the tolerance by 1; M_cpd03919_c0 exceeds the tolerance by 1; M_cpd03917_c0 exceeds the tolerance by 1; M_cpd02039_c0 exceeds the tolerance by 1; M_cpd02590_c0 exceeds the tolerance by 1; M_cpd02557_c0 exceeds the tolerance by 1; M_cpd11484_c0 exceeds the tolerance by 1; M_cpd11529_c0 exceeds the tolerance by 1; M_cpd00558_e0 exceeds the tolerance by 1; M_cpd15479_c0 exceeds the tolerance by 1; M_cpd00030_e0 exceeds the tolerance by 1; M_cpd02685_c0 exceeds the tolerance by 1; M_cpd03916_c0 exceeds the tolerance by 1; M_cpd03915_c0 exceeds the tolerance by 1; M_cpd00063_e0 exceeds the tolerance by 1; M_cpd03920_c0 exceeds the tolerance by 1; M_cpd11503_c0 exceeds the tolerance by 1; M_cpd11536_c0 exceeds the tolerance by 1; M_cpd00655_e0 exceeds the tolerance by 1; M_cpd03289_c0 exceeds the tolerance by 1; M_cpd08316_c0 exceeds the tolerance by 1; M_cpd15489_c0 exceeds the tolerance by 1; M_cpd04920_c0 exceeds the tolerance by 1; M_cpd11521_c0 exceeds the tolerance by 1; M_cpd11520_c0 exceeds the tolerance by 1; M_cpd02021_c0 exceeds the tolerance by 1; M_cpd11511_c0 exceeds the tolerance by 1; M_cpd00045_c0 exceeds the tolerance by 1; M_cpd02886_c0 exceeds the tolerance by 1; M_cpd03423_c0 exceeds the tolerance by 1; M_cpd11537_c0 exceeds the tolerance by 1; M_cpd15269_e0 exceeds the tolerance by 1; M_cpd11541_c0 exceeds the tolerance by 1; M_cpd11528_c0 exceeds the tolerance by 1; M_cpd03494_c0 exceeds the tolerance by 1; M_cpd15358_c0 exceeds the tolerance by 1; M_cpd02295_c0 exceeds the tolerance by 1; M_cpd11512_c0 exceeds the tolerance by 1; M_cpd00111_c0 exceeds the tolerance by 1; M_cpd03422_e0 exceeds the tolerance by 1; M_cpd02968_c0 exceeds the tolerance by 1; M_cpd00658_c0 exceeds the tolerance by 1; M_cpd01080_e0 exceeds the tolerance by 1; M_cpd00111_e0 exceeds the tolerance by 1; M_cpd11500_c0 exceeds the tolerance by 1; M_cpd03847_e0 exceeds the tolerance by 1; M_cpd00869_c0 exceeds the tolerance by 1; M_cpd11295_c0 exceeds the tolerance by 1; M_cpd11217_c0 exceeds the tolerance by 1; M_cpd00070_c0 exceeds the tolerance by 1; M_cpd00085_c0 exceeds the tolerance by 1; M_cpd00506_c0 exceeds the tolerance by 1; M_cpd00013_e0 exceeds the tolerance by 1; M_cpd02591_c0 exceeds the tolerance by 1; M_cpd16335_c0 exceeds the tolerance by 1; M_cpd00460_c0 exceeds the tolerance by 1; M_cpd03285_c0 exceeds the tolerance by 1; M_cpd08367_c0 exceeds the tolerance by 1; M_cpd00607_c0 exceeds the tolerance by 1; M_cpd01502_c0 exceeds the tolerance by 1; M_cpd03593_c0 exceeds the tolerance by 1; M_cpd00029_e0 exceeds the tolerance by 1; M_cpd00278_c0 exceeds the tolerance by 1; M_cpd11175_c0 exceeds the tolerance by 1; M_cpd00035_e0 exceeds the tolerance by 1; M_cpd00117_e0 exceeds the tolerance by 1; M_cpd00528_e0 exceeds the tolerance by 1; M_cpd00239_e0 exceeds the tolerance by 1; M_cpd15886_c0 exceeds the tolerance by 1; M_cpd15833_c0 exceeds the tolerance by 1; M_cpd02483_c0 exceeds the tolerance by 1; M_cpd15888_c0 exceeds the tolerance by 1; M_cpd15901_c0 exceeds the tolerance by 1; M_cpd15831_c0 exceeds the tolerance by 1; M_cpd15882_c0 exceeds the tolerance by 1; M_cpd15908_c0 exceeds the tolerance by 1; M_cpd15900_c0 exceeds the tolerance by 1; M_cpd15832_c0 exceeds the tolerance by 1; M_cpd15883_c0 exceeds the tolerance by 1; M_cpd15909_c0 exceeds the tolerance by 1; M_cpd16398_c0 exceeds the tolerance by 1; M_cpd15829_c0 exceeds the tolerance by 1; M_cpd15827_c0 exceeds the tolerance by 1; M_cpd15828_c0 exceeds the tolerance by 1; M_cpd15850_c0 exceeds the tolerance by 1; M_cpd03521_c0 exceeds the tolerance by 1; M_cpd02961_c0 exceeds the tolerance by 1; M_cpd00954_c0 exceeds the tolerance by 1; M_cpd00229_c0 exceeds the tolerance by 1; M_cpd02920_c0 exceeds the tolerance by 1; M_cpd00443_c0 exceeds the tolerance by 1; M_cpd15830_c0 exceeds the tolerance by 1; M_cpd15851_c0 exceeds the tolerance by 1; M_cpd02041_c0 exceeds the tolerance by 1; M_cpd15853_c0 exceeds the tolerance by 1; M_2ATDLH6U_c0 exceeds the tolerance by 1; M_cpd17158_c0 exceeds the tolerance by 1; M_2A3DHQ_c0 exceeds the tolerance by 1; M_4A3DHS_c0 exceeds the tolerance by 1; M_4ASKM_c0 exceeds the tolerance by 1; M_4A3H15D1C_c0 exceeds the tolerance by 1; M_cpd00139_c0 exceeds the tolerance by 1; M_cpd00040_c0 exceeds the tolerance by 1; M_cpd00374_c0 exceeds the tolerance by 1; M_GGT_c0 exceeds the tolerance by 1; M_4HM2FCP_c0 exceeds the tolerance by 1; M_5AM3FMP_c0 exceeds the tolerance by 1; M_5AM3FMPP_c0 exceeds the tolerance by 1; M_AEPM2FMA_c0 exceeds the tolerance by 1; M_cpd00244_c0 exceeds the tolerance by 1; M_cpd15873_c0 exceeds the tolerance by 1; M_cpd15874_c0 exceeds the tolerance by 1; M_cpd15875_c0 exceeds the tolerance by 1; M_cpd15905_c0 exceeds the tolerance by 1; M_cpd03425_c0 exceeds the tolerance by 1; M_cpd00244_e0 exceeds the tolerance by 1; M_cpd00180_c0 exceeds the tolerance by 1; M_cpd15839_c0 exceeds the tolerance by 1; M_cpd00159_c0 exceeds the tolerance by 1; M_cpd15809_c0 exceeds the tolerance by 1; M_cpd15889_c0 exceeds the tolerance by 1; M_cpd15864_c0 exceeds the tolerance by 1; M_cpd15865_c0 exceeds the tolerance by 1; M_cpd15868_c0 exceeds the tolerance by 1; M_cpd00204_c0 exceeds the tolerance by 1; M_cpd00204_e0 exceeds the tolerance by 1; M_cpd00131_e0 exceeds the tolerance by 1; M_cpd00131_c0 exceeds the tolerance by 1; M_cpd03523_c0 exceeds the tolerance by 1; M_cpd03732_c0 exceeds the tolerance by 1; M_cpd02782_c0 exceeds the tolerance by 1; M_U2A2D3OG_c0 exceeds the tolerance by 1; M_U2A3A23DDG_c0 exceeds the tolerance by 1; M_U23DA23DDG_c0 exceeds the tolerance by 1; M_U23DA23DDM_c0 exceeds the tolerance by 1; M_U3A23DAM_c0 exceeds the tolerance by 1; M_N2A24D5MH4U15P_c0 exceeds the tolerance by 1; M_N2A24D5MAEH5U15P_c0 exceeds the tolerance by 1; M_LIP4SUG_c0 exceeds the tolerance by 1; M_LIP4SUGT_c0 exceeds the tolerance by 1; M_LIP1SUG_c0 exceeds the tolerance by 1; M_LIP2SUG_c0 exceeds the tolerance by 1; M_LIP3SUG_c0 exceeds the tolerance by 1; M_LIP4SUGT_e0 exceeds the tolerance by 1; M_FLGN_e0 exceeds the tolerance by 1; M_ARCN_e0 exceeds the tolerance by 1; M_MEMLIP_c0 exceeds the tolerance by 1; M_cpd00703_c0 exceeds the tolerance by 1; M_cpd00703_e0 exceeds the tolerance by 1; M_cpd00489_e0 exceeds the tolerance by 1; M_cpd00489_c0 exceeds the tolerance by 1; M_cpd00430_e0 exceeds the tolerance by 1; M_cpd00430_c0 exceeds the tolerance by 1; M_cpd03165_c0 exceeds the tolerance by 1; M_cpd00452_c0 exceeds the tolerance by 1; M_cpd00802_c0 exceeds the tolerance by 1; M_cpd00428_c0 exceeds the tolerance by 1; M_cpd00055_c0 exceeds the tolerance by 1; M_cpd15573_c0 exceeds the tolerance by 1; M_cpd15565_c0 exceeds the tolerance by 1; M_cpd16442_c0 exceeds the tolerance by 1; M_cpd15563_c0 exceeds the tolerance by 1; M_cpd16579_c0 exceeds the tolerance by 1; M_cpd03387_c0 exceeds the tolerance by 1; M_cpd03396_c0 exceeds the tolerance by 1; M_cpd03396_e0 exceeds the tolerance by 1; M_cpd00207_c0 exceeds the tolerance by 1; M_cpd17039_c0 exceeds the tolerance by 1; M_cpd02797_c0 exceeds the tolerance by 1; M_cpd02824_c0 exceeds the tolerance by 1; M_cpd18042_c0 exceeds the tolerance by 1; M_ARCHLS_c0 exceeds the tolerance by 1; M_SATARCHL_c0 exceeds the tolerance by 1; M_SATARCHLS_c0 exceeds the tolerance by 1; M_cpd11640_e0 exceeds the tolerance by 1; M_cpd01024_e0 exceeds the tolerance by 1
```

**2 cases**

```text
BIOMD0000000141: SimulationFailure: roadrunner: RuntimeError: CVODE Error: CV_CONV_FAILURE: Convergence test failures occurred too many times (= MXNCF = 10) during one internal timestep or occurred with |h| = hmin.; In virtual double rr::CVODEIntegrator::integrate(double, double)
BIOMD0000000158: SimulationFailure: roadrunner: RuntimeError: CVODE Error: CV_CONV_FAILURE: Convergence test failures occurred too many times (= MXNCF = 10) during one internal timestep or occurred with |h| = hmin.; In virtual double rr::CVODEIntegrator::integrate(double, double)
```

**2 cases**

```text
BIOMD0000000540: SimulationFailure: roadrunner: RuntimeError: CVODE Error: CV_TOO_MUCH_WORK: The solver took mxstep (100000) internal steps but could not reach tout.; In virtual double rr::CVODEIntegrator::integrate(double, double)
BIOMD0000000541: SimulationFailure: roadrunner: RuntimeError: CVODE Error: CV_TOO_MUCH_WORK: The solver took mxstep (100000) internal steps but could not reach tout.; In virtual double rr::CVODEIntegrator::integrate(double, double)
```

## Skipped cases

| reason | cases |
| --- | --- |
| no variables | 3 |
| package fbc | 12 |

## Cases

| case | name | components | roadrunner | sbml2cellml | libopencor | cellml2sbml | roundtrip | informative |
| --- | --- | --- | --- | --- | --- | --- | --- | --- |
| BIOMD0000000001 | Edelstein1996 - EPSP ACh event | Reactions, Events | pass | pass | fail | pass | fail | yes |
| BIOMD0000000002 | Edelstein1996 - EPSP ACh species | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000003 | Goldbeter1991 - Min Mit Oscil | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000004 | Goldbeter1991 - Min Mit Oscil, Expl Inact | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000005 | Tyson1991 - Cell Cycle 6 var | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000006 | Tyson1991 - Cell Cycle 2 var | Reactions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000007 | Novak1997 - Cell Cycle | Reactions, Events, AssignmentRules, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000008 | Gardner1998 - Cell Cycle Goldbeter | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000009 | Huang1996 - Ultrasensitivity in MAPK cascade | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000010 | Kholodenko2000 - Ultrasensitivity and negative feedback bring oscillations in MAPK cascade | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000011 | Levchenko2000_MAPK_noScaffold | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000012 | Elowitz2000 - Repressilator | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000013 | Poolman2004_CalvinCycle | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000014 | Levchenko2000_MAPK_Scaffold | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000015 | Curto1998 - purine metabolism | Reactions | pass | pass | pass | pass | pass | no |
| BIOMD0000000016 | Goldbeter1995_CircClock | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000017 | Hoefnagel2002_PyruvateBranches | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000018 | Morrison1989 - Folate Cycle | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000019 | Schoeberl2002 - EGF MAPK | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000020 | hodgkin-huxley squid-axon 1952 | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000021 | Leloup1999_CircClock | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000022 | Ueda2001_CircClock | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000023 | Rohwer2001_Sucrose | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000024 | Scheper1999_CircClock | Reactions, Delay | fail | fail | skip | skip | skip |  |
| BIOMD0000000025 | Smolen2002_CircClock | Reactions, AssignmentRules, Delay | fail | fail | skip | skip | skip |  |
| BIOMD0000000026 | Markevich2004_MAPK_orderedElementary | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000027 | Markevich2004 - MAPK double phosphorylation,  ordered Michaelis-Menton | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000028 | Markevich2004_MAPK_phosphoRandomElementary | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000029 | Markevich2004_MAPK_phosphoRandomMM | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000030 | Markevich2004_MAPK_AllRandomElementary | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000031 | Markevich2004_MAPK_orderedMM2kinases | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000032 | Kofahl2004_PheromonePathway | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000033 | Brown2004 - NGF and EGF signaling | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000034 | Smolen2004_CircClock | Reactions, RateRules, Delay | fail | fail | skip | skip | skip |  |
| BIOMD0000000035 | Vilar2002_Oscillator | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000036 | Tyson1999_CircClock | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000037 | Marwan2003 - Genetics, regulatory hierarchy between genes | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000038 | Rohwer2000_Phosphotransferase_System | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000039 | Marhl2000_CaOscillations | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000040 | Field1974_Oregonator | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000041 | Kongas2007 - Creatine Kinase in energy metabolic signaling in muscle | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000042 | Nielsen1998_Glycolysis | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000043 | Borghans1997 - Calcium Oscillation - Model 1 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000044 | Borghans1997 - Calcium Oscillation - Model 2 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000045 | Borghans1997 - Calcium Oscillation - Model 3 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000046 | Olsen2003_peroxidase | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000047 | Oxhamre2005_Ca_oscillation | Reactions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000048 | Kholodenko1999 - EGFR signaling | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000049 | Sasagawa2005_MAPK | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000050 | Martins2003_AmadoriDegradation | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000051 | Chassagnole2002_Carbon_Metabolism | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000052 | Brands2002 - Monosaccharide-casein systems | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000053 | Ferreira2003_CML_generation2 | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000054 | Ataullahkhanov1996_Adenylate | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000055 | Locke2005 - Circadian Clock | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000056 | Chen2004 - Cell Cycle Regulation | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000057 | Sneyd2002_IP3_Receptor | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000058 | Bindschadler2001_coupled_Ca_oscillators | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000059 | Fridlyand2003_Calcium_flux | Reactions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000060 | Keizer1996_Ryanodine_receptor_adaptation | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000061 | Hynne2001_Glycolysis | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000062 | Bhartiya2003_Tryptophan_operon | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000063 | Galazzo1990_FermentationPathwayKinetics | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000064 | Teusink2000_Glycolysis | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000065 | Yildirim2003_Lac_Operon | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000066 | Chassagnole2001_Threonine Synthesis | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000067 | Fung2005_Metabolic_Oscillator | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000068 | Curien2003_MetThr_synthesis | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000069 | Fuss2006_MitoticActivation | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000070 | Holzhutter2004_Erythrocyte_Metabolism | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000071 | Bakker2001_Glycolysis | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000072 | Yi2003_GproteinCycle | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000073 | Leloup2003_CircClock_DD | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000074 | Leloup2003_CircClock_DD_REV-ERBalpha | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000075 | Xu2003 - Phosphoinositide turnover | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000076 | Cronwright2002_Glycerol_Synthesis | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000077 | Blum2000_LHsecretion_1 | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000078 | Leloup2003_CircClock_LD | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000079 | Goldbeter2006_weightCycling | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000080 | Thomsen1989_AdenylateCyclase | Reactions | pass | pass | pass | pass | pass | no |
| BIOMD0000000081 | Suh2004_KCNQ_Regulation | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000082 | Thomsen1988_AdenylateCyclase_Inhibition | Reactions | pass | pass | pass | pass | pass | no |
| BIOMD0000000083 | Leloup2003_CircClock_LD_REV-ERBalpha | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000084 | Hornberg2005_ERKcascade | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000085 | Maurya2005_GTPaseCycle_reducedOrder | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000086 | Bornheimer2004_GTPaseCycle | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000087 | Proctor2006_telomere | Reactions, Events | pass | pass | pass | pass | pass | yes |
| BIOMD0000000088 | Maeda2006_MyosinPhosphorylation | Reactions, Events | pass | pass | pass | pass | pass | yes |
| BIOMD0000000089 | Locke2006_CircClock_LL | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000090 | Wolf2001_Respiratory_Oscillations | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000091 | Proctor2005 - Actions of chaperones and their role in ageing | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000092 | Fuentes2005_ZymogenActivation | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000093 | Yamada2003_JAK_STAT_pathway | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000094 | Yamada2003_JAK_STAT_SOCS1_knockout | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000095 | Zeilinger2006_PRR7-PRR9-Y | Reactions, Events | pass | pass | fail | pass | fail | yes |
| BIOMD0000000096 | Zeilinger2006_PRR7-PRR9light-Y | Reactions, Events | pass | pass | fail | pass | fail | yes |
| BIOMD0000000097 | Zeilinger2006_PRR7-PRR9light-Yprime | Reactions, Events | pass | pass | fail | pass | fail | yes |
| BIOMD0000000098 | Goldbeter1990_CalciumSpike_CICR | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000099 | Laub1998_SpontaneousOscillations | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000100 | Rozi2003_GlycogenPhosphorylase_Activation | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000101 | Vilar2006_TGFbeta | Reactions, Events | pass | pass | pass | pass | pass | yes |
| BIOMD0000000102 | Legewie2006_apoptosis_WT | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000103 | Legewie2006_apoptosis_NC | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000104 | Klipp2002_MetabolicOptimization_linearPathway(n=2) | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000105 | Proctor2007 - Age related decline of proteolysis, ubiquitin-proteome system | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000106 | Yang2007_ArachidonicAcid | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000107 | Novak1993 - Cell cycle M-phase control | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000108 | Kowald2006_SOD | Reactions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000109 | Haberichter2007_cellcycle | Reactions, Events, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000110 | Qu2003_CellCycle | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000111 | Novak2001_FissionYeast_CellCycle | Reactions, Events, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000112 | Clarke2006_Smad_signalling | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000113 | Dupont1992_Ca_dpt_protein_phospho | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000114 | Somogyi1990_CaOscillations | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000115 | Somogyi1990_CaOscillations_SingleCaSpike | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000116 | McClean2007_CrossTalk | Reactions | pass | pass | pass | pass | pass | no |
| BIOMD0000000117 | Dupont1991_CaOscillation | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000118 | Golomb2006_SomaticBursting | FunctionDefinitions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000119 | Golomb2006_SomaticBursting_nonzero[Ca] | Reactions, FunctionDefinitions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000120 | Chan2004_TCell_receptor_activation | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000121 | Clancy2001_Kchannel | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000122 | Fisher2006_Ca_Oscillation_dpdnt_NFAT_dynamics | Reactions, Events | pass | pass | fail | pass | fail | yes |
| BIOMD0000000123 | Fisher2006_NFAT_Activation | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000124 | Wu2006_K+Channel | Reactions, Events, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000125 | Komarova2005_TheoreticalFramework_BasicArchitecture | Reactions, Events | pass | pass | fail | pass | fail | yes |
| BIOMD0000000126 | Clancy2002_CardiacSodiumChannel_WT | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000127 | Izhikevich2003_SpikingNeuron | Events, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000128 | Bertram2006_Endothelin | Reactions, Events, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000129 | Izhikevich2004_SpikingNeurons_inhibitionInducedSpiking | Events, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000130 | Izhikevich2004_SpikingNeurons_integrator | Events, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000131 | Izhikevich2004_SpikingNeurons_reboundBurst | Events, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000132 | Izhikevich2004_SpikingNeurons_reboundSpike | Events, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000133 | Izhikevich2004_SpikingNeurons_resonator | Events, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000134 | Izhikevich2004_SpikingNeurons_SpikeLatency | Events, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000135 | Izhikevich2004_SpikingNeurons_subthresholdOscillations | Events, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000136 | Izhikevich2004_SpikingNeurons_thresholdVariability | Events, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000137 | Sedaghat2002_InsulinSignalling_noFeedback | Reactions, Events, AssignmentRules | fail | pass | skip | pass | skip |  |
| BIOMD0000000138 | Tabak2007_dopamine | Reactions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000139 | Hoffmann2002_KnockOut_IkBNFkB_Signaling | Reactions, Events, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000140 | Hoffmann2002_WT_IkBNFkB_Signaling | Reactions, Events, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000141 | Izhikevich2004_SpikingNeurons_Class1Excitable | Events, AssignmentRules, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000142 | Izhikevich2004_SpikingNeurons_Class2Excitable | Events, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000143 | Olsen2003_neutrophil_oscillatory_metabolism | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000144 | Calzone2007_CellCycle | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000145 | Wang2007 - ATP induced intracellular Calcium Oscillation | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000146 | Hatakeyama2003_MAPK | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000147 | ODea2007_IkappaB | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000148 | Komarova2003_BoneRemodeling | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000149 | Kim2007 - Crosstalk between Wnt and ERK pathways | Reactions, Events, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000150 | Morris2002_CellCycle_CDK2Cyclin | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000151 | Singh2006_IL6_Signal_Transduction | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000152 | Fernandez2006_ModelA | Reactions, Events | pass | pass | pass | pass | pass | yes |
| BIOMD0000000153 | Fernandez2006_ModelB | Reactions, Events | pass | pass | pass | pass | pass | yes |
| BIOMD0000000154 | Zatorsky2006_p53_Model3 | Reactions, Delay | fail | fail | skip | skip | skip |  |
| BIOMD0000000155 | Zatorsky2006_p53_Model6 | Reactions, RateRules, Delay | fail | fail | skip | skip | skip |  |
| BIOMD0000000156 | Zatorsky2006_p53_Model5 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000157 | Zatorsky2006_p53_Model4 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000158 | Zatorsky2006_p53_Model2 | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000159 | Zatorsky2006_p53_Model1 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000160 | Xie2007_CircClock | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000161 | Eungdamrong2007_Ras_Activation | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000162 | Hernjak2005_Calcium_Signaling | Reactions, AssignmentRules | pass | pass | fail | pass | pass | yes |
| BIOMD0000000163 | Zi2007_TGFbeta_signaling | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000164 | SmithAE2002_RanTransport | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000165 | Saucerman2006_PKA | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000166 | Zhu2007_TF_modulated_by_Calcium | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000167 | Mayya2005_STATmodule | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000168 | Obeyesekere1999_CellCycle | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000169 | Aguda1999_CellCycle | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000170 | Weimann2004_CircadianOscillator | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000171 | Leloup1998_CircClock_LD | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000172 | Pritchard2002_glycolysis | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000173 | Schmierer_2008_Smad_Tgfb | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000174 | Del_Conte_Zerial2008_Rab5_Rab7_cut_out_switch | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000175 | Birtwistle2007_ErbB_Signalling | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000176 | Conant2007_WGD_glycolysis_2A3AB | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000177 | Conant2007_glycolysis_2C | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000178 | Lebeda2008 - BoTN Paralysis (4 step model) | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000179 | Kim2007_CellularMemory_AsymmetricModel | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000180 | Kim2007_CellularMemory_SymmetricModel | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000181 | Sriram2007_CellCycle | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000182 | Neves2008 - Role of cell shape and size in controlling intracellular signalling | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000183 | Stefan2008 - calmodulin allostery | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000184 | Lavrentovich2008_Ca_Oscillations | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000185 | Locke2008_Circadian_Clock | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000186 | Ibrahim2008 - Mitotic Spindle Assembly Checkpoint - Dissociation variant | Reactions, Events | pass | pass | pass | pass | pass | no |
| BIOMD0000000187 | Ibrahim2008 - Mitotic Spindle Assembly Checkpoint - Convey variant | Reactions, Events | pass | pass | pass | pass | pass | no |
| BIOMD0000000188 | Proctor2008 - p53/Mdm2 circuit - p53 stabilisation by ATM | Reactions, Events, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000189 | Proctor2008 - p53/Mdm2 circuit - p53 stablisation by p14ARF | Reactions, Events, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000190 | Rodriguez-Caso2006_Polyamine_Metabolism | Reactions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000191 | Montañez2008_Arginine_catabolism | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000192 | Görlich2003_RanGTP_gradient | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000193 | Ibrahim2008_MCC_assembly_model_KDM | Reactions, Events | pass | pass | pass | pass | pass | no |
| BIOMD0000000194 | Ibrahim2008_Cdc20_Sequestring_Template_Model | Reactions, Events | pass | pass | pass | pass | pass | no |
| BIOMD0000000195 | Tyson2001_Cell_Cycle_Regulation | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000196 | Srividhya2006_CellCycle | Reactions, Events, FunctionDefinitions, AssignmentRules, Delay | fail | fail | skip | skip | skip |  |
| BIOMD0000000197 | Bartholome2007_MDCKII | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000198 | Stone1996 - activation of soluble guanylate cyclase by nitric oxide | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000199 | Santolini2001_nNOS_Mechanism_Regulation | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000200 | Bray1995_chemotaxis_receptorlinkedcomplex | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000201 | Goldbeter2008_Somite_Segmentation_Clock_Notch_Wnt_FGF | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000202 | ChenXF2008_CICR | Reactions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000203 | Chickarmane2006 - Stem cell switch reversible | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000204 | Chickarmane2006 - Stem cell switch irreversible | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000205 | Ung2008_EGFR_Endocytosis | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000206 | Wolf2000_Glycolytic_Oscillations | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000207 | Romond1999_CellCycle | Reactions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000208 | Deineko2003_CellCycle | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000209 | Chickarmane2008 - Stem cell lineage determination | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000210 | Chickarmane2008 - Stem cell lineage - NANOG GATA-6 switch | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000211 | Albert2005_Glycolysis | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000212 | Curien2009_Aspartate_Metabolism | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000213 | Nijhout2004_Folate_Cycle | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000214 | Akman2008_Circadian_Clock_Model2 | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000215 | Schulz2009_Th1_differentiation | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000216 | Hong2009_CircadianClock | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000217 | Bruggeman2005_AmmoniumAssimilation | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000218 | Singh2006_TCA_mtu_model2 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000219 | Singh2006_TCA_mtu_model1 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000220 | Albeck2008_extrinsic_apoptosis | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000221 | Singh2006_TCA_Ecoli_acetate | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000222 | Singh2006_TCA_Ecoli_glucose | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000223 | Borisov2009_EGF_Insulin_Crosstalk | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000224 | Meyer1991_CalciumSpike_ICC | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000225 | Westermark2003_Pancreatic_GlycOsc_basic | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000226 | Radulescu2008_NFkB_hierarchy_M_14_25_28_Lipniacky | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000227 | Radulescu2008_NFkB_hierarchy_M_39_65_90 | Reactions, Events | pass | pass | pass | pass | pass | yes |
| BIOMD0000000228 | Swat2004_Mammalian_G1_S_Transition | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000229 | Ma2002_cAMP_oscillations | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000230 | Ihekwaba2004_NFkB_Sensitivity | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000231 | Valero2006_Adenine_TernaryCycle | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000232 | Nazaret2009_TCA_RC_ATP | Reactions, InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000233 | Wilhelm2009_BistableReaction | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000234 | Tham2008 - PDmodel, Tumour shrinkage by gemcitabine and carboplatin | Events, InitialAssignments, AssignmentRules, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000235 | Kuhn2009_EndoMesodermNetwork | Reactions, Events | pass | pass | fail | pass | fail | yes |
| BIOMD0000000236 | Westermark2003_Pancreatic_GlycOsc_extended | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000237 | Schaber2006_Pheromone_Starvation_Crosstalk | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000238 | Overgaard2007_PDmodel_IL21 | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000239 | Jiang2007 - GSIS system, Pancreatic Beta Cells | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000240 | Veening2008_DegU_Regulation | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000241 | Shi1993_Caffeine_pressor_tolerance | Events, AssignmentRules, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000242 | Bai2003_G1phaseRegulation | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000243 | Neumann2010_CD95Stimulation_NFkB_Apoptosis | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000244 | Kotte2010_Ecoli_Metabolic_Adaption | Reactions, Events, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000245 | Lei2001_Yeast_Aerobic_Metabolism | Reactions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000246 | Vasalou2010_Pacemaker_Neuron_SCN | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000247 | Ralser2007_Carbohydrate_Rerouting_ROS | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000248 | Lai2007_O2_Transport_Metabolism | Reactions, AssignmentRules, RateRules | pass | pass | fail | pass | pass | yes |
| BIOMD0000000249 | Restif2006 - Whooping cough | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000250 | Nakakuki2010_CellFateDecision_Mechanistic | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000251 | Nakakuki2010_CellFateDecision_Core | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000252 | Hunziker2010_p53_StressSpecificResponse | RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000253 | Teusink1998_Glycolysis_TurboDesign | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000254 | Bier2000_GlycolyticOscillation | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000255 | Chen2009 - ErbB Signaling | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000256 | Rehm2006_Caspase | Reactions, Events, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000257 | Piedrafita2010_MR_System | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000258 | Ortega2006 - bistability from double phosphorylation in signal transduction | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000259 | Tiago2010_FeMetabolism_FeDeficient | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000260 | Tiago2010_FeMetabolism_FeAdequate | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000261 | Tiago2010_FeMetabolism_FeLoaded | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000262 | Fujita2010_Akt_Signalling_EGF | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000263 | Fujita2010_Akt_Signalling_NGF | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000264 | Fujita2010_Akt_Signalling_EGFRinhib | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000265 | Conradie2010_RPControl_CellCycle | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000266 | Voit2003 - Trehalose Cycle | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000267 | Lebeda2008 - BoNT paralysis (3 step model) | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000268 | Reed2008_Glutathione_Metabolism | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000269 | Liu2010_Hormonal_Crosstalk_Arabidopsis | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000270 | Schilling2009 - ERK distributive | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000271 | Becker2010_EpoR_CoreModel | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000272 | Becker2010_EpoR_AuxiliaryModel | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000273 | Pokhilko2010_CircClock | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000274 | Rattanakul2003_BoneFormationModel | RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000275 | Goldbeter2007_Somitogenesis_Switch | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000276 | Shrestha2010_HypoCalcemia_PTHresponse | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000277 | Shrestha2010_HyperCalcemia_PTHresponse | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000278 | Lemaire2004 - Role of RANK/RANKL/OPG pathway in bone remodelling process | AssignmentRules, RateRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000279 | Komarova2005_PTHaction_OsteoclastOsteoblastCoupling | AssignmentRules, RateRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000280 | Morris1981_MuscleFibre_Voltage_reduced | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000281 | Chance1960_Glycolysis_Respiration | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000282 | Chance1952_Catalase_Mechanism | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000283 | Chance1943_Peroxidase_ES_Kinetics | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000284 | Hofmeyer1986_SeqFb_Proc_AA_Synthesis | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000285 | Tang2010_PolyGlutamate | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | no |
| BIOMD0000000286 | Proctor2010 - a link between GSK3 and p53 in Alzheimer's Disease | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000287 | Passos2010_DNAdamage_CellularSenescence | Reactions, Events | pass | pass | pass | pass | pass | yes |
| BIOMD0000000288 | Wang2009 - PI3K Ras Crosstalk | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000289 | Alexander2010_Tcell_Regulation_Sys1 | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000290 | Alexander2010_Tcell_Regulation_Sys2 | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000291 | Nikolaev2005_AlbuminBilirubinAdsorption | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000292 | Rovers1995_Photsynthetic_Oscillations | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000293 | Proctor2010 - UCHL1 Protein Aggregation | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000294 | Restif2007 - Vaccination invasion | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000295 | Akman2008_Circadian_Clock_Model1 | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000296 | Balagaddé2008_E_coli_Predator_Prey | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000297 | Ciliberto2003_Morphogenesis_Checkpoint | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000298 | Leloup1999_CircadianRhythms_Drosophila | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000299 | Leloup1999_CircadianRhythms_Neurospora | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000300 | Schmierer2010_FIH_Ankyrins | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000301 | Friedland2009_Ara_RTC3_counter | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000302 | Wang1996_Synaptic_Inhibition_Two_Neuron | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000303 | Liu2011_Complement_System | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000304 | Plant1981_BurstingNerveCells | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000305 | Kolomeisky2003_MyosinV_Processivity | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000306 | Tyson2003_Activator_Inhibitor | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000307 | Tyson2003_Substrate_Depletion_Osc | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000308 | Tyson2003_NegFB_Oscillator | Reactions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000309 | Tyson2003_NegFB_Homeostasis | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000310 | Tyson2003_Mutual_Inhibition | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000311 | Tyson2003_Mutual_Activation | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000312 | Tyson2003_Perfect_Adaption | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000313 | Raia2010 - IL13 Signalling MedB1 | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000314 | Raia2011 - IL13 L1236 | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000315 | Montagne2011_Oligator_optimised | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000316 | Shen-Orr2002_FeedForward_AND_gate | Reactions, Events, FunctionDefinitions | pass | pass | fail | pass | fail | yes |
| BIOMD0000000317 | Shen-Orr2002_Single_Input_Module | Reactions, Events, FunctionDefinitions, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000318 | Yao2008_Rb_E2F_Switch | Reactions, Events | pass | pass | fail | pass | fail | yes |
| BIOMD0000000319 | Decroly1982_Enzymatic_Oscillator | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000320 | Grange2001 - PK interaction of L-dopa and benserazide | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000321 | Grange2001 - L Dopa PK model | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000322 | Kim2011_Oscillator_SimpleI | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000323 | Kim2011_Oscillator_SimpleIII | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000324 | Morris1981_MuscleFibre_Voltage_full | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000325 | Palini2011_Minimal_2_Feedback_Model | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000326 | DellOrco2009_phototransduction | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000327 | Whitcomb2004_Bicarbonate_Pancreas | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000328 | Bucher2011_Atorvastatin_Metabolism | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000329 | Kummer2000 - Oscillations in Calcium Signalling | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000330 | Larsen2004_CalciumSpiking | RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000331 | Larsen2004_CalciumSpiking_EnzymeBinding | RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000332 | Bungay2006_Plasma | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000333 | Bungay2006_FollicularFluid | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000334 | Bungay2003_Thrombin_Generation | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000335 | Hockin2002_BloodCoagulation | Reactions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000336 | Jones1994_BloodCoagulation | Reactions, FunctionDefinitions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000337 | Pfeiffer2001_ATP-ProducingPathways_CooperationCompetition | Reactions, Events | pass | pass | fail | pass | fail | yes |
| BIOMD0000000338 | Wajima2009_BloodCoagulation_aPTTtest | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000339 | Wajima2009_BloodCoagulation_PTtest | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000340 | Wajima2009_BloodCoagulation_warfarin_heparin | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000341 | Topp2000_BetaCellMass_Diabetes | RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000342 | Zi2011_TGF-beta_Pathway | Reactions, Events, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000343 | Brannmark2010_InsulinSignalling_Mifamodel | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000344 | Proctor2011_ProteinHomeostasis_NormalCondition | Reactions, Events, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000345 | Koschorreck2008_InsulinClearance | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000346 | FitzHugh1961_NerveMembrane | RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000347 | Bachmann2011_JAK2-STAT5_FeedbackControl | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000348 | Fridlyand2010_GlucoseSensitivity_A | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000349 | Fridlyand2010_GlucoseSensitivity_B | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000350 | Troein2011_ClockCircuit_OstreococcusTauri | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000351 | Vernoux2011_AuxinSignaling_AuxinSingleStepInput | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000352 | Vernoux2011_AuxinSignaling_AuxinFluctuating | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000353 | Nag2011_ChloroplasticStarchDegradation | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000354 | Abell2011_CalciumSignaling_WithoutAdaptation | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000355 | Abell2011_CalciumSignaling_WithAdaptation | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000356 | Nyman2011_M3Hierarachical_InsulinGlucosedynamics | Reactions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000357 | Lee2010_ThrombinActivation_OneForm_reduced | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000358 | Stortelder1997 - Thrombin Generation Amidolytic Activity | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000359 | Panteleev2002_TFPImechanism_schmema3 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000360 | Panteleev2002_TFPImechanism_schmema2 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000361 | Panteleev2002_TFPImechanism_schmema1 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000362 | Butenas2004_BloodCoagulation | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000363 | Lee2010_ThrombinActivation_OneForm_minimal | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000364 | Lee2010_ThrombinActivation_OneForm | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000365 | Hockin1999_BloodCoagulation_VaInactivation | Reactions | pass | pass | pass | pass | pass | no |
| BIOMD0000000366 | Orfao2008_ThrombinGeneration_AmidolyticActivity | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000367 | Mueller2008_ThrombinGeneration_minimal | RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000368 | Beltrami1995_ThrombinGeneration_C | InitialAssignments, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000369 | Beltrami1995_ThrombinGeneration_D | InitialAssignments, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000370 | Vinod2011_MitoticExit | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000371 | DeVries2000_PancreaticBetaCells_InsulinSecretion | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000372 | Tolic2000_InsulinGlucoseFeedback | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000373 | Bertram2004_PancreaticBetaCell_modelB | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000374 | Bertram1995_PancreaticBetaCell_CRAC | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000375 | Mears1997_CRAC_PancreaticBetaCells | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000376 | Bertram2007_IsletCell_Oscillations | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000377 | Bertram2000_PancreaticBetaCells_Oscillations | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000378 | Chay1997_CalciumConcentration | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000379 | DallaMan2007_MealModel_GlucoseInsulinSystem | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000380 | Smallbone2011_TrehaloseBiosynthesis | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000381 | Maree2006_DuCa_Type1DiabetesModel | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000382 | Sturis1991_InsulinGlucoseModel_UltradianOscillation | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000383 | Arnold2011_Farquhar1980_RuBisCO-CalvinCycle | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000384 | Arnold2011_Medlyn2002_RuBisCO-CalvinCycle | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000385 | Arnold2011_Schultz2003_RuBisCO-CalvinCycle | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000386 | Arnold2011_Sharkey2007_RuBisCO-CalvinCycle | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000387 | Arnold2011_Damour2007_RuBisCO-CalvinCycle | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000388 | Arnold2011_Zhu2009_CalvinCycle | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000389 | Arnold2011_Hahn1986_CalvinCycle_Starch_Sucrose | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000390 | Arnold2011_Giersch1990_CalvinCycle | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000391 | Arnold2011_Poolman2000_CalvinCycle_Starch | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000392 | Arnold2011_Laisk2006_CalvinCycle_Starch_Sucrose | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000393 | Arnold2011_Zhu2007_CalvinCycle_Starch_Sucrose_Photorespiration | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000394 | Sivakumar2011 - EGF Receptor Signaling Pathway | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000395 | Sivakumar2011 - Hedgehog Signaling Pathway | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000396 | Sivakumar2011 - Notch Signaling Pathway | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000397 | Sivakumar2011_WntSignalingPathway | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000398 | Sivakumar2011_NeuralStemCellDifferentiation_Crosstalk | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000399 | Jenkinson2011_EGF_MAPK | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000400 | Cooling2007_IP3transients_CardiacMyocyte | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000401 | Ayati2010_BoneRemodelingDynamics_NormalCondition | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000402 | Ayati2010_BoneRemodelingDynamics_WithTumour | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000403 | Ayati2010_BoneRemodelingDynamics_WithTumour+DrugTreatment | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000404 | Bray1993_chemotaxis | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000405 | Cookson2011_EnzymaticQueueingCoupling | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000406 | Moriya2011_CellCycle_FissionYeast | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000407 | Schliemann2011_TNF_ProAntiApoptosis | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000408 | Hettling2011_CreatineKinase | Reactions, Events, AssignmentRules, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000409 | Queralt2006_MitoticExit_Cdc55DownregulationBySeparase | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000410 | Wegner2012_TGFbetaSignalling_FeedbackLoops | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000411 | Heiland2012_CircadianClock_C.reinhardtii | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000412 | Pokhilko2012_CircClock_RepressilatorFeedbackloop | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000413 | Band2012_DII-Venus_FullModel | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000414 | Band2012_DII-Venus_ReducedModel | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000415 | Mellor2012_LipooxygenasePathway | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000416 | Muraro2011_Cytokinin-Auxin_CrossRegulation | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000417 | Ratushny2012_NF | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000418 | Ratushny2012_SPF | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000419 | Ratushny2012_SPF_I | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000420 | Ratushny2012_ASSURE_I | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000421 | Ratushny2012_ASSURE_II | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000422 | Middleton2012_GibberellinSignalling | Reactions, Events, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000423 | Nyman2012_InsulinSignalling | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000424 | Faratian2009 - Role of PTEN in Trastuzumab resistance | Reactions, AssignmentRules | fail | pass | skip | pass | skip |  |
| BIOMD0000000425 | Tan2012 - Antibiotic Treatment, Inoculum Effect | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000426 | Mosca2012 - Central Carbon Metabolism Regulated by AKT | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000427 | Bianconi2012 - EGFR and IGF1R pathway in lung cancer | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000428 | Achcar2012 - Glycolysis in bloodstream form T. brucei | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000429 | Schaber2012 - Hog pathway in yeast | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000430 | Sarma2012 - Interaction topologies of MAPK cascade (M4_K2_USEQ) | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000431 | Sarma2012 - Interaction topologies of MAPK cascade (M4_K2_PSEQ) | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000432 | Sarma2012 - Interaction topologies of MAPK cascade (M4_K2_QSS_USEQ) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000433 | Sarma2012 - Interaction topologies of MAPK cascade (M4_K2_QSS_PSEQ) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000434 | McAuley2012 - Whole-body Cholesterol Metabolism | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000435 | deBack2012 - Lineage Specification in Pancreas Development | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000436 | Gupta2009 - Eicosanoid Metabolism | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000437 | Tseng2012 - Circadian clock of N.crassa | Reactions, Events, AssignmentRules | pass | fail | skip | skip | skip | yes |
| BIOMD0000000438 | Saeidi2012 - Quorum sensing device that produces GFP | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000439 | Smith2009 - RGS mediated GTP hydrolysis | Reactions, Events | pass | pass | fail | pass | fail | yes |
| BIOMD0000000440 | Sarma2012 - Oscillations in MAPK cascade (S1) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000441 | Sarma2012 - Oscillations in MAPK cascade (S2) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000442 | Sarma2012 - Oscillations in MAPK cascade (S2), inclusion of external signalling module | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000443 | Sarma2012 - Oscillations in MAPK cascade (S1n) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000444 | Sarma2012 - Oscillations in MAPK cascade (S2n) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000445 | Pokhilko2013 - TOC1 signalling in Arabidopsis circadian clock | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000446 | Erguler2013 - Unfolded protein stress response | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000447 | Venkatraman2012 - Interplay between PLS and TSP1 in TGF-β1 activation | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000448 | Brännmark2013 - Insulin signalling in human adipocytes (normal condition) | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000449 | Brännmark2013 - Insulin signalling in human adipocytes (diabetic condition) | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000450 | Reyes-Palomares2012 -  a combined model hepatic polyamine and sulfur aminoacid metabolism - version2 | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000451 | Carbo2013 - Cytokine driven CD4+ T Cell differentiation and phenotype plasticity | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000452 | Bidkhori2012 - normal EGFR signalling | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000453 | Bidkhori2012 - EGFR signalling in NSCLC | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000454 | Smallbone2013 - Metabolic Control Analysis - Example 1 | Reactions | pass | pass | pass | pass | pass | no |
| BIOMD0000000455 | Smallbone2013 - Metabolic Control Analysis - Example 2 | Reactions | pass | pass | pass | pass | pass | no |
| BIOMD0000000456 | Smallbone2013 - Metabolic Control Analysis - Example 3 | Reactions | pass | pass | pass | pass | pass | no |
| BIOMD0000000457 | Firczuk2013 - Eukaryotic mRNA translation machinery | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000458 | Smallbone2013 - Serine biosynthesis | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000459 | Liebal2012 - B.subtilis post-transcriptional instability model | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000460 | Liebal2012 - B.subtilis sigB proteolysis model | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000461 | Liebal2012 - B.subtilis transcription inhibition model | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000462 | Proctor2012 - Role of Amyloid-beta dimers in aggregation formation | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000463 | Heldt2012 - Influenza Virus Replication | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000464 | Koo2013 - Shear stress induced calcium influx and eNOS activation - Model 1 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000465 | Koo2013 - Shear stress induced AKT and eNOS phosphorylation - Model 2 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000466 | Koo2013 - Shear stress induced eNOS expression - Model 3 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000467 | Koo2013 - Shear stress induced NO production - Model 4 | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000468 | Koo2013 - Integrated shear stress induced NO production model | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000469 | Smallbone2013 - E.coli metabolic model with linlog rate law | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | no |
| BIOMD0000000470 | Smallbone2013 - E.coli metabolic model with modular rate law | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | no |
| BIOMD0000000471 | Smallbone2013 - Yeast metabolic model with linlog rate law | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | no |
| BIOMD0000000472 | Smallbone2013 - Yeast metabolic model with modular rate law | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | no |
| BIOMD0000000473 | Smallbone2013 - Yeast metabolic model with modular rate law, merged with Pritchard 2002 | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | no |
| BIOMD0000000474 | Smith2013 - Regulation of Insulin Signalling by Oxidative Stress | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000475 | Amara2013 - PCNA ubiquitylation in the activation of PRR pathway | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000476 | Adams2012 - Locke2006 Circadian Rhythm model refined with Input Signal Light Function | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000477 | Mol2013 - Immune Signal Transduction in Leishmaniasis | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000478 | Besozzi2012 - Oscillatory regimes in the Ras/cAMP/PKA pathway in S.cerevisiae | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000479 | Croft2013 - GPCR-RGS interaction that compartmentalizes RGS activity | Reactions, Events | pass | pass | fail | pass | fail | yes |
| BIOMD0000000480 | Carbo2013 - Mucosal Immune Response during H.pylori Infection | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000481 | Stötzel2012 - Bovine estrous cycle, synchronization with prostaglandin F2α | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000482 | Noguchi2013 - Insulin dependent glucose metabolism | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000483 | Cao2008 - Network of a toggle switch | Reactions | pass | pass | pass | pass | pass | no |
| BIOMD0000000484 | Cao2013 - Application of ABSIS method in birth-death process | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000485 | Cao2013 - Application of ABSIS method in the bistable Schlögl model | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000486 | Cao2013 - Application of ABSIS method in the reversible isomerization model | Reactions | pass | pass | pass | pass | pass | no |
| BIOMD0000000487 | Cao2013 - Application of ABSIS in the the enzymatic futile cycle | Reactions | pass | pass | pass | pass | pass | no |
| BIOMD0000000488 | Proctor2013 - Effect of Aβ immunisation in Alzheimer's disease (deterministic version) | Reactions, Events | pass | pass | pass | pass | pass | yes |
| BIOMD0000000489 | Sharp2013 - Lipopolysaccharide induced NFkB activation | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000490 | Demin2013 - PKPD behaviour - 5-Lipoxygenase inhibitors | Reactions, AssignmentRules | fail | pass | skip | pass | skip |  |
| BIOMD0000000491 | Pathak2013 - MAPK activation in response to various abiotic stresses | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000492 | Pathak2013 - MAPK activation in response to various biotic stresses | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000493 | Schittler2010 - Cell fate of progenitor cells, osteoblasts or chondrocytes | Reactions, Events | pass | pass | pass | pass | pass | yes |
| BIOMD0000000494 | Roblitz2013 - Menstrual Cycle following GnRH analogue administration | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000495 | Sen2013 - Phospholipid Synthesis in P.knowlesi | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000496 | Stanford2013 - Kinetic model of yeast metabolic network (standard) | Reactions, Events, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000497 | Stanford2013 - Kinetic model of yeast metabolic network (regulation) | Reactions, Events, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000498 | Mitchell2013 - Liver Iron Metabolism | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000499 | Vizan2013 - TGF pathway long term signaling | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000500 | Begitt2014 - STAT1 cooperative DNA binding - single GAS polymer model | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000501 | Begitt2014 - STAT1 cooperative DNA binding - double GAS polymer model | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000502 | Messiha2013 - Pentose phosphate pathway model | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000503 | Messiha2013 - combined glycolysis and pentose phosphate pathway model | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000504 | Proctor2013 - Cartilage breakdown, interventions to reduce collagen release | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000505 | vanEunen2013 - Network dynamics of fatty acid β-oxidation (steady-state model) | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000506 | vanEunen2013 - Network dynamics of fatty acid β-oxidation (time-course model) | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000507 | Gardner2000 - genetic toggle switch in E.coli | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000508 | Barrack2014 - Calcium/cell cycle coupling - Cyclin D dependent ATP release | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000509 | Barrack2014 - Calcium/cell cycle coupling - Rs dependent ATP release | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000510 | Kerkhoven2013 - Glycolysis and Pentose Phosphate Pathway in T.brucei - MODEL C (with glucosomal ribokinase) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000511 | Kerkhoven2013 - Glycolysis and Pentose Phosphate Pathway in T.brucei - MODEL D (with ATP:ADP antiporter) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000512 | Benson2014 - FAAH inhibitors for the treatment of osteoarthritic pain | Reactions, AssignmentRules | fail | pass | skip | pass | skip |  |
| BIOMD0000000513 | Kerkhoven2013 - Glycolysis in T.brucei - MODEL A | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000514 | Kerkhoven2013 - Glycolysis and Pentose Phosphate Pathway in T.brucei - MODEL B | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000515 | Kerkhoven2013 - Glycolysis and Pentose Phosphate Pathway in T.brucei - MODEL C in fructose medium (with glucosomal ribokinase) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000516 | Kerkhoven2013 - Glycolysis and Pentose Phosphate Pathway in T.brucei - MODEL D in fructose medium (with ATP:ADP antiporter) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000517 | Smallbone2013 - Colon Crypt cycle - Version 3 | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000518 | Smallbone2013 - Colon Crypt cycle - Version 2 | Reactions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000519 | Smallbone2013 - Colon Crypt cycle - Version 1 | Reactions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000520 | Smallbone2013 - Colon Crypt cycle - Version 0 | Reactions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000521 | Ribba2012 - Low-grade gliomas, tumour growth inhibition model | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000522 | Muraro2014 - Vascular patterning in Arabidopsis roots | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000523 | Kallenberger2014 - CD95L induced apoptosis initiated by caspase-8, CD95 HeLa cells (cis/trans variant) | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000524 | Kallenberger2014 - CD95L induced apoptosis initiated by caspase-8, wild-type HeLa cells (cis/trans variant) | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000525 | Kallenberger2014 - CD95L induced apoptosis initiated by caspase-8, CD95 HeLa cells (cis/trans-cis/trans variant) | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000526 | Kallenberger2014 - CD95L induced apoptosis initiated by caspase-8, wild-type HeLa cells (cis/trans-cis/trans variant) | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000527 | Kaiser2014 - Salmonella persistence after ciprofloxacin treatment | RateRules | fail | pass | skip | pass | skip |  |
| BIOMD0000000528 | Fribourg2014 - Dynamics of viral antagonism and innate immune response (H1N1 influenza A virus - Cal/09) | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000529 | Fribourg2014 - Dynamics of viral antagonism and innate immune response (H1N1 influenza A virus - NC/99) | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000530 | Schmitz2014 - RNA triplex formation | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000531 | Crespo2012 - Kinetics of Amyloid Fibril Formation | AssignmentRules | pass | fail | skip | skip | skip | yes |
| BIOMD0000000532 | Vazquez2014 - Chemical inhibition from amyloid protein aggregation kinetics | AssignmentRules | pass | fail | skip | skip | skip | yes |
| BIOMD0000000533 | Steckmann2012 - Amyloid beta-protein fibrillogenesis (kinetics of secondary structure conversion) | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000534 | Dwivedi2014 - Healthy Volunteer IL6 Model | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000535 | Dwivedi2014 - Crohns IL6 Disease model - Anti-IL6 Antibody | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000536 | Dwivedi2014 - Crohns IL6 Disease model - sgp130 activity | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000537 | Dwivedi2014 - Crohns IL6 Disease model - Anti-IL6R Antibody | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000538 | Clarke2000 - One-hit model of cell death in neuronal degenerations | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000539 | François2005 - Mixed Feedback Loop (two-gene network) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000540 | Yugi2014 - Insulin induced signalling (PFKL phosphorylation) - model 1 | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000541 | Yugi2014 - Insulin induced signalling (PFKL phosphorylation) - model 2 | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000542 | Yuraszeck2010 - Vulnerabilities in the Tau Network in Tau Pathophysiology | Reactions, FunctionDefinitions, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000543 | Qi2013 - IL-6 and IFN crosstalk model (non-competitive) | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000544 | Qi2013 - IL-6 and IFN crosstalk model | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000545 | Ouyang2014 - photomorphogenic UV-B signalling network | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000546 | Miao2010 - Innate and adaptive immune responses to primary Influenza A Virus infection_1_1 | Reactions, FunctionDefinitions, layout:package, render:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000000547 | Talemi2014 - Arsenic toxicity and detoxification mechanisms in yeast | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | pass | yes |
| BIOMD0000000548 | Sneppen2009 - Modeling proteasome dynamics in Parkinson's disease | RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000549 | Baker2013 - Cytokine Mediated Inflammation in Rheumatoid Arthritis - Age Dependent | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000550 | Baker2013 - Cytokine Mediated Inflammation in Rheumatoid Arthritis | RateRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000551 | Das2010 - Effect of a gamma-secretase inhibitor on Amyloid-beta dynamics | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000552 | Ehrenstein2000 - Positive-Feedback model for the loss of acetylcholine in Alzheimer's disease | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000553 | Ehrenstein1997 - The choline-leakage hypothesis in Alzheimer's disease | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000554 | Cloutier2009 - Brain Energy Metabolism | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000555 | Auer2010 - Correlation between lag time and aggregation rate in protein aggregation | AssignmentRules | pass | fail | skip | skip | skip | yes |
| BIOMD0000000556 | Ortega2013 - Interplay between secretases determines biphasic amyloid-beta level | Reactions, FunctionDefinitions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000557 | Reiterer2013 - pseudophosphatase STYX role in ERK signalling | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000558 | Cloutier2012 - Feedback motif for Parkinson's disease | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000559 | Ouzounoglou2014 - Modeling of alpha-synuclein effects on neuronal homeostasis | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000560 | Hui2016 - Age-related changes in articular cartilage | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000561 | Martins2013 - True and apparent inhibition of amyloid fribril formation | AssignmentRules | pass | fail | skip | skip | skip | yes |
| BIOMD0000000563 | Pritchard2014 - plant-microbe interaction | Reactions, Events, FunctionDefinitions | pass | pass | fail | pass | fail | yes |
| BIOMD0000000564 | Gould2013 - Temperature Sensitive Circadian Clock | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000565 | Machado2014 - Curcumin production pathway in Escherichia coli | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000566 | Morris2009 - α-Synuclein aggregation variable temperature and pH | Reactions, AssignmentRules | pass | fail | skip | skip | skip | yes |
| BIOMD0000000567 | Morris2008 - Fitting protein aggregation data via F-W 2-step mechanism | Reactions, InitialAssignments, AssignmentRules | pass | fail | skip | skip | skip | yes |
| BIOMD0000000568 | Mueller2015 - Hepatocyte proliferation, T160 phosphorylation of CDK2 | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000569 | Dutta-Roy2015 - Opening of the multiple AMPA receptor conductance states | Reactions, FunctionDefinitions, InitialAssignments | pass | pass | pass | pass | pass | yes |
| BIOMD0000000570 | Aubert2002 - Coupling between Brain electrical activity, Metabolism and Hemodynamics | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000571 | Nishio2008 - Design of the phosphotransferase system for enhanced glucose uptake in E. coli. | Reactions, Events, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000572 | Costa2014 - Computational Model of L. lactis Metabolism | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000573 | Aguilera 2014 - HIV latency. Interaction between HIV proteins and immune response | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000574 | Lai2014 - Hemiconcerted MWC model of intact calmodulin with two targets | Reactions, AssignmentRules | pass | pass | fail | pass | pass | yes |
| BIOMD0000000575 | Sass2009 - Approach to an α-synuclein-based BST model of Parkinson's disease | Reactions, FunctionDefinitions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000576 | Kolodkin2013 - Nuclear receptor-mediated cortisol signalling network | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000577 | Zhou2015 - Circadian clock with immune regulator NPR1 | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000578 | Invergo2014 - Phototransduction cascade in mouse rod cells | Reactions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000579 | Sengupta2015 - Knowledge base model of human energy pool network (HEPNet) | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000580 | Sonntag2012 - mTOR model - IRS dependent regulation of AMPK by insulin | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000581 | DallePezze2012 - TSC-independent mTORC2 regulation | Reactions, InitialAssignments | pass | pass | pass | pass | pass | yes |
| BIOMD0000000582 | DallePezze2014 -  Cellular senescene-induced mitochondrial dysfunction | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000583 | Leber2015 - Mucosal immunity and gut microbiome interaction during C. difficile infection | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000584 | Mandlik2015 - Tristable genetic circuit of Leishmania | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000585 | Rateitschak2012 - Interferon-gamma (IFNγ) induced STAT1 signalling (PC_IFNg100) | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000586 | Karapetyan2016 - Genetic oscillatory network - Activator Titration Circuit (ATC) | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000587 | Karapetyan2016 - Genetic oscillatory network - Repressor Titration Circuit (RTC) | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000588 | Benson2013 - Identification of key drug targets in nerve growth factor pathway | Reactions | fail | pass | skip | pass | skip |  |
| BIOMD0000000589 | Valero2016 - Ascorbate-Glutathione cycle in chloroplasts under light/dark conditions | FunctionDefinitions, InitialAssignments, AssignmentRules, RateRules | fail | pass | skip | pass | skip |  |
| BIOMD0000000590 | Hermansen2015 - denovo biosynthesis of pyrimidines in yeast | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000591 | Boehm2014 - isoform-specific dimerization of pSTAT5A and pSTAT5B | Reactions, InitialAssignments | pass | pass | pass | pass | pass | yes |
| BIOMD0000000594 | Capuani2015 - Binding of Cbl and Gbr2 to EGFR (Multisite Phosphorylation Model - MPM) | Reactions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000595 | Capuani2015 - Binding of Cbl and Grb2 to EGFR (Early Activation Model - EAM) | Reactions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000596 | Philipson2015 - Innate immune response modulated by NLRX1 | Reactions, FunctionDefinitions, layout:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000000597 | Flis2015 - Plant clock gene circuit (P2011.1.2 PLM_71 ver 1) | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000598 | Flis2015 - Plant clock gene circuit (P2011.2.1 PLM_71 ver 2) | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000599 | Coggins2014 - CXCL12 dependent recruitment of beta arrestin | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000600 | Cellière2011 - Plasticity of TGF-β Signalling | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000601 | Rosas2015 - Caffeine-induced luminal SR calcium changes | Reactions, Events, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000602 | Stavrum2013 - Tryptophan Metabolism in Liver | Reactions | pass | pass | pass | pass | pass | no |
| BIOMD0000000603 | PetelenzKuehn_osmoadaptation_WT | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000604 | PetelenzKuehn_osmoadaptation_pfk2627D | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000605 | PetelenzKuehn_osmoadaptation_HOG1att | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000606 | PetelenzKuehn_osmoadaptation_hog1D | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000607 | PetelenzKuehn_osmoadaptation_fps1D1 | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000608 | Palsson2013 - Fully-integrated immune response model (FIRM) | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000609 | Reddyhoff2015 - Acetaminophen metabolism and toxicity | Reactions, FunctionDefinitions, InitialAssignments | pass | pass | pass | pass | pass | no |
| BIOMD0000000610 | PetelenzKuehn_osmoadaptation_gpd1D | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000611 | Nayak2015 - Blood Coagulation Network - Predicting the Effects of Various Therapies on Biomarkers | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000612 | Proctor2016 - Circadian rhythm of PTH and the dynamics of signaling molecules on bone remodeling | Reactions, Events | pass | pass | pass | pass | pass | yes |
| BIOMD0000000613 | Peterson2010 - Integrated calcium homeostasis and bone remodelling | Reactions, Events, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000614 | Kamihira2000 - calcitonin fibrillation kinetics | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000615 | Kuznetsov2016(II) - α-syn aggregation kinetics in Parkinson's Disease | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000616 | Dunster2014 - WBC Interactions (Model1) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000617 | Walsh2014 - Inhibition kinetics of DAPT on APP Cleavage | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000618 | Krohn2011 - Cerebral amyloid-β proteostasis regulated by membrane transport protein ABCC1 | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000619 | Sluka2016  - Acetaminophen PBPK | Reactions, InitialAssignments | pass | pass | pass | pass | pass | yes |
| BIOMD0000000620 | Palmer2014 - Effect of IL-1β-Blocking therapies in T2DM - Disease Condition | Reactions, Events, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000621 | Palmer2014 - Effect of IL-1β-Blocking therapies in T2DM - Healthy Condition | Reactions, Events, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000622 | NguyenLK2011 - Ubiquitination dynamics in Ring1B/Bmi1 system | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000623 | Orton2009 - Modelling cancerous mutations in the EGFR/ERK pathway - EGF Model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000624 | Sluka2016 - Acetaminophen metabolism | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000625 | Leber2016 - Expanded model of Tfh-Tfr differentiation - Helicobacter pylori infection | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000626 | Ray2013 - Meiotic initiation in S. cerevisiae | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000627 | Winter2017 - Brain Energy Metabolism with PPP | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000628 | Li2012 Calcium mediated synaptic plasticity | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000629 | Haffez2017 - RAR interaction with synthetic analogues | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000630 | Venkatraman2011 - PLS-UPA behaviour in the presence of substrate competition_1_1_1_1 | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000631 | DeCaluwe2016 - Circadian Clock | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000632 | Kollarovic2016 - Cell fate decision at G1-S transition | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000633 | Bulik2016 - Regulation of hepatic glucose metabolism | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000634 | Proctor2013 - Effect of Aβ immunisation in Alzheimer's disease (stochastic version) | Reactions, Events | pass | pass | pass | pass | pass | yes |
| BIOMD0000000635 | Nair2015 - Interaction between neuromodulators via GPCRs - Effect on cAMP/PKA signaling (D1 Neuron) | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000636 | Nair2015 - Interaction between neuromodulators via GPCRs - Effect on cAMP/PKA signaling (D2 Neuron) | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000637 | Bush2016 - Simplified Carrousel model of GPCR | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000638 | Bush2016 - Extended Carrousel model of GPCR-RGS | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000639 | Thiaville2016 - Wild type folate pathway model with proposed PanB reaction | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000640 | DallePezze2016 - Activation of AMPK and mTOR by amino acids | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000641 | Jaiswal2017 - Cell cycle arrest | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000642 | Mufudza2012 - Estrogen effect on the dynamics of breast cancer | RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000643 | Musante2017 - Switching behaviour of PP2A inhibition by ARPP-16 - mutual inhibitions | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000644 | Musante2017 - Switching behaviour of PP2A inhibition by ARPP-16 - mutual inhibitions and PKA inhibits MAST3 | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000645 | Musante2017 - Switching behaviour of PP2A inhibition by ARPP-16 - mutual inhibitions and PKA inhibits MAST3 and dominant negative effect | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000646 | Barr2016 - All-or-nothing G1/S transition | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000647 | Kwang2003 - The influence of RKIP on the ERK signaling pathway | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000648 | Padala2017- ERK, PI3K/Akt and Wnt signalling network (normal) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000650 | Owen1998 - Tumour  treatment model | Events, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000651 | Nguyen2016 - Feedback regulation in cell signalling: Lessons for cancer therapeutics | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000652 | Padala2017- ERK, PI3K/Akt and Wnt signalling network (PI3K mutated) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000653 | Padala2017- ERK, PI3K/Akt and Wnt signalling network (bRaf mutated) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000654 | Padala2017- ERK, PI3K/Akt and Wnt signalling network (Ras mutated) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000655 | Padala2017- ERK, PI3K/Akt and Wnt signalling network (PTEN mutation) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000656 | Padala2017- ERK, PI3K/Akt and Wnt signalling network (EGFR overexpression) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000657 | Araujo2016 - Positive feedback in Cdk1 signalling keeps mitotic duration short and constant | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000658 | Lee2003 - Roles of APC and Axin in Wnt Pathway (without regulatory loop) | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000659 | Cursons2015 - Regulation of ERK-MAPK signaling in human epidermis | Events, AssignmentRules, RateRules | fail | pass | skip | pass | skip |  |
| BIOMD0000000660 | Barr2017 - Dynamics of p21 in hTert-RPE1 cells | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000661 | Webb2002 - Fas/FasL mediated tumor T-cell interaction | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000662 | Moore2004 - Chronic Myeloid Leukemic cells and T-lymphocyte interaction | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000663 | Wodarz2007 - HIV/CD4 T-cell interaction | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000664 | Muller2008 - Simplified MAPK activation Dynamics (Model B) | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000665 | Fallon2000 - Interleukin-2 dynamics | Reactions, FunctionDefinitions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000666 | Pappalardo2016 - PI3K/AKT and MAPK Signaling Pathways in Melanoma Cancer | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000667 | Hornberg2005 - MAPKsignalling | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000668 | Zhu2015 - Combined gemcitabine and birinapant in pancreatic cancer cells - basic PD model | Reactions, InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000669 | Zhu2015 - Combined gemcitabine and birinapant in pancreatic cancer cells - mechanistic PD model | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000670 | Owen1998 - tumour growth model | RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000671 | Murphy2016 - Differences in predictions of ODE models of tumor growth | RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000672 | Brown1997 - Plasma Melatonin Levels | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000673 | Lockwood2006 - Alzheimer's Disease PBPK model | AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000674 | Reyes-Palomares2012 - a combined model hepatic polyamine and sulfur aminoacid metabolism - version1 | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000675 | Chen2000_CellCycle | Events, AssignmentRules, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000676 | Chen2006 - Nitric Oxide Release from Endothelial Cells | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000677 | Holmes2006 - Hill's model of muscle contraction | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000678 | Tomida2003 - Calcium Oscillatory-induced translocation of nuclear factor of activated T cells | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000679 | Waugh2006 - Diabetic Wound Healing - Macrophage Dynamics | Reactions, FunctionDefinitions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000680 | Waugh2006 - Diabetic Wound Healing - TGF-B Dynamics | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000681 | Waugh2006 - Diabetic Wound Healing - Treated and Untreated Macrophage Dynamics | Events, AssignmentRules, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000682 | Wierschem2004 - Electrical bursting activity in Pancreatic Islets | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000683 | Wodarz1999 CTL memory response HIV | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000684 | Wodarz2003 - Immunological Memory | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000685 | Wodarz2003 - Cytotoxic T lymphocyte cross-priming | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000686 | Wodarz2007 - Basic Model of Cytomegalovirus Infection | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000687 | Wodarz2007 - Cytomegalovirus infection model with cytotoxic T lymphocyte response | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000688 | Wodarz2007 - Cytomegalovirus infection model with cytotoxic T lymphocyte and natural killer cell response | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000689 | Thiaville2016 - Folate pathway model (PanB overexpression) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000690 | Thiaville2016 - Folate pathway model (PanB overexpression and THF regulation) | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000691 | Wolf2000 - Cellular interaction on glycolytic oscillations in yeast | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000692 | Phillips2003 - The Mechanism of Ras GTPase Activation by Neurofibromin | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000693 | Wang2008 - Mimicking the inhibitory effect of riluzole on membrane conductance in skeletal fibres | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000695 | FelixGarza2017 - Blue Light Treatment of Psoriasis (simplified) | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000696 | Boada2016 - Incoherent type 1 feed-forward loop (I1-FFL) | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000697 | Ciliberto2003 - CyclinE / Cdk2 timer in the cell cycle of Xenopus laevis embryo | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000698 | Reed2004 - Methionine Cycle | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000699 | Caydasi2012 - Regulation of Tem1 by the GAP complex in spindle position cell cycle checkpoint - Ubiquitous association model | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000700 | Heldt2018 - Proliferation-quiescence decision in response to DNA damage | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000701 | Caydasi2012 - Inhibition of Tem1 by the GAP complex in Spindle Position Checkpoint | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000702 | Caydasi2012 - Regulation of Tem1 by the GAP complex in Spindle Position Checkpoint - Ubiquitous inactive model | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000703 | Diedrichs2018 - A data-entrained computational model for testing the regulatory logic of the vertebrate unfolded protein response | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000704 | Aguda1999 - G2 DNA damage checkpoint | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000705 | Smith2010 - Response of FOXO Transcription Factors to Post-Translational Modifications Made by Ageing-Related Signalling Pathways | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000706 | Smith2010 - Response of FOXO Transcription Factors to Post-Translational Modifications (with acetylation pathway) | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000707 | Revilla2003 - Controlling HIV infection using recombinant viruses | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000708 | Liu2017 - Dynamics of Avian Influenza with Logistic Growth | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000709 | Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000710 | Hernandez-Vargas2012 - Innate immune system dynamics to Influenza virus | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000711 | Hancioglu2007 - Human Immune Response to Influenza A virus Infection | Reactions, Events, FunctionDefinitions, AssignmentRules | fail | pass | skip | pass | skip |  |
| BIOMD0000000712 | Manchanda2014 - Effect on Immune System by 4 different Influenza A virus strains | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000713 | Aston2018 - Dynamics of Hepatitis C Infection | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000714 | Reynolds2006 - Reduced model of the acute inflammatory response | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000715 | Huo2017 - SEIS epidemic model with the impact of media | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000716 | Lee2018 - Avian human bilinear incidence (BI) model | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000717 | Lee2018 - Avian human half-saturated incidence (HSI) model | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000718 | Li2008 - Caulobacter Cell Cycle | Reactions, Events, FunctionDefinitions | pass | pass | fail | pass | fail | yes |
| BIOMD0000000719 | Tsai2014 - Cell cycle duration control by oscillatory Dynamics  in Early Xenopus laevis Embryos | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000720 | Yan2012 - Rb-E2F pathway dynamics with miR449 | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000721 | Graham2013 - Role of osteocytes in targeted bone remodeling | Reactions, FunctionDefinitions, InitialAssignments | pass | pass | pass | pass | pass | yes |
| BIOMD0000000722 | Bianchi2015 -Model for lymphangiogenesis in normal and diabetic wounds | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000723 | Weis2014 - Data driven Mammalian Cell Cycle Model | Reactions, FunctionDefinitions, AssignmentRules | fail | pass | skip | pass | skip |  |
| BIOMD0000000724 | Theinmozhi2018 - Mechanism of PD1 inhibiting TCR signaling in Tumor immune regulation | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000725 | Salcedo-Sora2016 - Microbial folate biosynthesis and utilisation | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000726 | Ruan2017 - Transmission dynamics and control of rabies in China | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000727 | Li2009- Assymetric Caulobacter cell cycle | Reactions, Events, FunctionDefinitions | pass | pass | fail | pass | fail | yes |
| BIOMD0000000728 | Norel1990 - MPF and Cyclin Oscillations | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000729 | Goldbeter1996 - Cyclin Cdc2 kinase Oscillations | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000730 | Gerard2009 - An Integrated Mammalian Cell Cycle Model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000731 | Robertson-Tessi M 2012 A model of tumor Immune interaction | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000732 | Kirschner1998_Immunotherapy_Tumour | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000733 | Moore_2004_Mathematical model for CML and T cell interaction | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000734 | Mouse Iron Distribution - Rich and Deficient iron diets (tracer) | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000735 | Mouse Iron Distribution - Adequate iron diet (tracer) | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000736 | Mouse Iron Distribution - Adequate iron diet (No Tracer) | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000737 | Mouse Iron Distribution - Deficient iron diet (No Tracer) | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000738 | Mouse Iron Distribution - Rich iron diet (No Tracer) | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000739 | Bravo2012 - Modelling blood coagulation factor Va inactivation by APC | Reactions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | pass | yes |
| BIOMD0000000740 | Panteleev2010 - Blood Coagulation: Full Model | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000741 | Eftimie2018 - Cancer and Immune biomarkers | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000742 | Garcia2018basic - cancer and immune cell count basic model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000743 | Gallaher2018 - Tumor–Immune dynamics in multiple myeloma | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000744 | Hu2019 - Pancreatic cancer dynamics | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000745 | Jarrett2018 - trastuzumab-induced immune response in murine HER2+ breast cancer model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000746 | Saad2017 - immune checkpoint and BCG in superficial bladder cancer | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000747 | Nagashima2002 - Simulating blood coagulation inhibitory effects | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000748 | Phan2017 - innate immune in oncolytic virotherapy | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000749 | Reppas2015 - tumor control via alternating immunostimulating and immunosuppressive phases | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | fail | yes |
| BIOMD0000000750 | Lolas2016 - tumour-induced neoneurogenesis and perineural tumour growth | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000751 | Wilkie2013b - immune-induced cancer dormancy and immune evasion-basic | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000752 | Wilkie2013r - immune-induced cancer dormancy and immune evasion-resistance | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000753 | Figueredo2013/1 - immunointeraction base model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000754 | Figueredo2013/2 - immunointeraction model with IL2 | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000755 | Hansen2019 - Nine species reduced model of blood coagulation | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000756 | Figueredo2013/3 - immunointeraction full model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000757 | Abernathy2016 - glioblastoma treatment | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000758 | Babbs2012 - immunotherapy | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000759 | den Breems2015 - macrophage in cancer | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000760 | Feizabadi2011/1 - immunodeficiency in cancer core model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000761 | Cappuccio2006 - Cancer immunotherapy by interleukin-21 | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000762 | Kuznetsov1994 - Nonlinear dynamics of immunogenic tumors | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000763 | Dritschel2018 - A mathematical model of cytotoxic and helper T cell interactions in a tumour microenvironment | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000764 | Malinzi2019 - chemovirotherapy | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000765 | Mager2005 - Quasi-equilibrium pharmacokinetic model for drugs exhibiting target-mediated drug disposition | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000766 | Macnamara2015/1 - virotherapy full model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000767 | Macnamara2015/2 - virotherapy virus-free submodel | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000768 | Eftimie2010 - immunity to melanoma | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000769 | Eftimie2017/2 - interaction of Th and macrophage in melanoma | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000770 | Eftimie2017/1 - interaction of Th and macrophage | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000771 | Bajzer2008 - Modeling of cancer virotherapy with recombinant measles viruses | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000772 | Wang2019 - A mathematical model of oncolytic virotherapy with time delay | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000773 | Wodarz2018/2 - model with transit amplifying cells | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000774 | Wodarz2018/1 - simple model | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000775 | Iarosz2015 - brain tumor | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000776 | Monro2008 - chemotherapy resistance | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000777 | Chakrabarty2010 - A control theory approach to cancer remission aided by an optimal therapy | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000778 | Wei2017 - tumor, T cell and cytokine interaction | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000779 | dePillis2009 - Mathematical model creation for cancer chemo-immunotherapy | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000780 | Wang2016/1 - oncolytic efficacy of M1 virus-SNTM model | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000781 | Wang2016/2 - oncolytic efficacy of M1 virus-SNT model | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000782 | Wang2016/3 - oncolytic efficacy of M1 virus-SN model | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000783 | Dong2014 - Mathematical modeling on helper t cells in a tumor immune system | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000784 | Lopez2014 - A Validated Mathematical Model of Tumor Growth Including Tumor-Host Interaction and Cell-Mediated Immune Response | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000785 | Sotolongo-Costa2003 - Behavior of tumors under nonstationary therapy | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000786 | Lipniacki2004 - Mathematical model of NFKB regulatory module | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules, layout:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000000787 | Frascoli2014 - A dynamical model of tumour immunotherapy | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000788 | Schropp2019 - Target-Mediated Drug Disposition Model for Bispecific Antibodies | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000789 | Jenner2018 - treatment of oncolytic virus | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000790 | Alvarez2019 - A nonlinear mathematical model of cell-mediated immune response for tumor phenotypic heterogeneity | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000791 | Wilson2012 - tumor vaccine efficacy | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000792 | Hu2019 - Modeling Pancreatic Cancer Dynamics with Immunotherapy | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000793 | Chen2011/1 - bone marrow invasion absolute model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000794 | Benary2019 - Controlling NFKB dynamics by B-TrCP | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules, layout:package | pass | pass | pass | pass | pass | no |
| BIOMD0000000795 | Chen2011/2 - bone marrow invasion relative model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000796 | Yang2012 - cancer growth with angiogenesis | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000797 | Hu2018 - Dynamics of tumor-CD4+-cytokine-host cells interactions with treatments | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | pass | yes |
| BIOMD0000000798 | Sharp2019 - AML | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000799 | Cucuianu2010 - A hypothetical-mathematical model of acute myeloid leukaemia pathogenesis | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000800 | Precup2012 - Mathematical modeling of cell dynamics after allogeneic bone marrow transplantation | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000801 | Sturrock2015 - glioma growth | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000802 | Hoffman2018- ADCC against cancer | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000803 | Park2019 - IL7 receptor signaling in T cells | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000804 | Koenders2015 - multiple myeloma | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000805 | Al-Husari2013 - pH and lactate in tumor | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000806 | Eftimie2019-Macrophages Plasticity | Reactions, Events, FunctionDefinitions | pass | pass | fail | pass | fail | yes |
| BIOMD0000000807 | Fassoni2019 - Oncogenesis encompassing mutations and genetic instability | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | pass | yes |
| BIOMD0000000808 | Kronik2008 - Improving alloreactive CTL immunotherapy for malignant gliomas using a simulation model of their interactive dynamics | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000809 | Malinzi2018 - tumour-immune interaction model | Reactions, FunctionDefinitions, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000810 | Ganguli2018-immuno regulatory mechanisms in tumor microenvironment | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | pass | yes |
| BIOMD0000000811 | He2017 - A mathematical model of pancreatic cancer with two kinds of treatments | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000812 | Galante2012 - B7-H1 and a Mathematical Model for Cytotoxic T Cell and Tumor Cell Interaction | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000813 | Anderson2015 - Qualitative behavior of systems of tumor-CD4+-cytokine interactions with treatments | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000814 | Perez-Garcia19 - Computational design of improved standardized chemotherapy protocols for grade 2 oligodendrogliomas | Reactions, Events, FunctionDefinitions | pass | pass | fail | pass | fail | yes |
| BIOMD0000000815 | Chrobak2011 - A mathematical model of induced cancer-adaptive immune system competition | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000816 | Gevertz2018 - Cancer Treatment with Oncolytic Viruses and Dendritic Cell injections original model | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000817 | Gevertz2018 - cancer treatment with oncolytic viruses and dendritic cell injections minimal model | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000818 | Lee2008 - ERK and PI3K signal integration by Myc | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000819 | Nazari2018 - IL6 mediated stem cell driven tumor growth and targeted treatment | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000820 | West2019 - Cellular interactions constrain tumor growth | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000821 | Yazdjer2019 - reinforcement learning-based control of tumor growth under anti-angiogenic therapy | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000822 | Dorvash2019 - Dynamic modeling of signal transduction by mTOR complexes in cancer | Reactions, Events, FunctionDefinitions | pass | pass | pass | pass | pass | no |
| BIOMD0000000823 | Varusai2018 - Dynamic modelling of the mTOR signalling network reveals complex emergent behaviours conferred by DEPTOR | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000824 | Lewkiewics2019 - effects of aging on naive T cell populations and diversity | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000825 | Greene2019 - Differentiate Spontaneous and Induced Evolution to Drug Resistance During Cancer Treatment | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000826 | Shin_2018_EGFR-PYK2-c-Met interaction network_model | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000827 | Ito2019 - gefitnib resistance of lung adenocarcinoma caused by MET amplification | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | no |
| BIOMD0000000828 | Jung2019 - Regulating glioblastoma signaling pathways and anti-invasion therapy - core control model | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000829 | Jung2019 - egulating glioblastoma signaling pathways and anti-invasion therapy cell cycle dynamics model | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000830 | GiantsosAdams2013 - Growth of glycocalyx under static conditions | Reactions, FunctionDefinitions, layout:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000000831 | Smith1980 - Hypothalamic Regulation | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000832 | Shin2016 - Unveiling Hidden Dynamics of Hippo Signalling | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000833 | DiCamillo2016 - Insulin signalling pathway - Rule-based model | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000834 | Verma2016 - Ca(2+) Signal Propagation Along Hepatocyte Cords | Reactions, Events, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000835 | Rao2014 - Fatty acid beta-oxidation (reduced model) | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000836 | Radosavljevic2009_BioterroristAttack_PanicProtection_1 | RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000837 | Hanson2016 - Toxicity Management in CAR T cell therapy for B-ALL | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000838 | Tsur2019 - Response of patients with melanoma to immune checkpoint blockade | Reactions, FunctionDefinitions, InitialAssignments | pass | pass | pass | pass | pass | yes |
| BIOMD0000000839 | Almeida2019 - Transcription-based circadian mechanism controls the duration of molecular clock states in response to signaling inputs | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000840 | Caldwell2019 - The Vicodin abuse problem | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000841 | Dhawan2019 - Endogenous miRNA sponges mediate the generation of oscillatory dynamics for a non-coding RNA network | Reactions, FunctionDefinitions, Delay | fail | fail | skip | skip | skip |  |
| BIOMD0000000842 | Heitzler2012 - GPCR signalling | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000843 | Dudziuk2019 - Biologically sound formal model of Hsp70 heat induction | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000844 | Viertel2019 - A Computational model of the mammalian external tufted cell | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000845 | Gulbudak2019.1 - Heterogeneous viral strategies promote coexistence in virus-microbe systems (Lytic) | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000846 | Gulbudak2019.2 - Heterogeneous viral strategies promote coexistence in virus-microbe systems (Chronic) | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000847 | Adams2019 - The regulatory role of shikimate in plant phenylalanine metabolism | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000848 | FatehiChenar2018 - Mathematical model of immune response to hepatitis B | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000849 | Potassium balance in lactating and non-lactating dairy cows | Reactions, FunctionDefinitions, AssignmentRules, layout:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000000850 | Jenner2019 - Oncolytic virotherapy for tumours following a Gompertz growth law | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000851 | Ho2019 - Mathematical models of transmission dynamics and vaccine strategies in Hong Kong during the 2017-2018 winter influenza season (Simple) | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000852 | Andersen2017 - Mathematical modelling as a proof of concept for MPNs as a human inflammation model for cancer development | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000853 | Smolen2018 - Paradoxical LTP maintenance with inhibition of protein synthesis and the proteasome | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000854 | Gray2016 - The Akt switch model | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000855 | Cooper2015 - Modeling the effects of systemic mediators on the inflammatory phase of wound healing | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000856 | Budding yeast size control by titration of nuclear sites | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000857 | Larbat2016.1 - Modeling the diversion of primary carbon flux into secondary metabolism under variable nitrate and light or dark conditions (Base Model) | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000858 | Larbat2016.2 - Modeling the diversion of primary carbon flux into secondary metabolism under variable nitrate and light or dark conditions (Light Dark Cycles) | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000859 | Larbat2016.3 - Modeling the diversion of primary carbon flux into secondary metabolism under variable nitrate and light or dark conditions (Light Dark Cycles with Minimum Starch Adaption) | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000860 | Proctor2017- Role of microRNAs in osteoarthritis (Positive Feedforward Incoherent By MicroRNA)_1 | Reactions, Events, FunctionDefinitions | pass | pass | pass | pass | pass | no |
| BIOMD0000000861 | Bachmann2011 - Division of labor by dual feedback regulators controls JAK2/STAT5 signaling over broad ligand range | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000862 | Proctor2017- Role of microRNAs in osteoarthritis (Positive Feedback By Micro RNA) | Reactions, Events, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000863 | Kosinsky2018 - Radiation and PD-(L)1 treatment combinations | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000864 | Proctor2017- Role of microRNAs in osteoarthritis (Negative Feedback By MicroRNA) | Reactions, Events, FunctionDefinitions | pass | pass | pass | pass | pass | no |
| BIOMD0000000865 | Nikolaev2019 - Immunobiochemical reconstruction of influenza lung infection-melanoma skin cancer interactions | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000866 | Simon2019 - NIK-dependent p100 processing into p52, Michaelis-Menten, SBML 2v4 | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000867 | Coulibaly2019 - Interleukin-15 Signaling in HIF-1a Regulation in Natural Killer Cells | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000868 | Simon2019 - NIK-dependent p100 processing into p52, Mass Action, SBML 2v4 | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000869 | Simon2019 - NIK-dependent p100 processing into p52 and IkBd degradation, Michaelis-Menten, SBML 2v4 | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000870 | Simon2019 - NIK-dependent p100 processing into p52 and IkBd degradation, mass action, SBML 2v4 | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000871 | NIK-dependent p100 processing into p52 with RelB binding and IkBd degradation, mass action, SBML 2v4 | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000872 | Verma2016 - HIV and HPV co-infection, T-cell response | Reactions, FunctionDefinitions, InitialAssignments, layout:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000000873 | Soni2018 - IL6 induced M2 Phenotype in Leishmania major infected macrophage | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000874 | Perelson1993 - HIVinfection_CD4Tcells_ModelA | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000875 | Nelson2000- HIV-1 general model 1 | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000876 | Aavani2019 - The role of CD4 T cells in immune system activation and viral reproduction in a simple model for HIV infection | Reactions, FunctionDefinitions, InitialAssignments | pass | pass | fail | pass | pass | yes |
| BIOMD0000000877 | Ontah2019 - Dynamic analysis of a tumor treatment model using oncolytic virus and chemotherapy with saturated infection rate | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000878 | Lenbury2001_InsulinKineticsModel_A | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000879 | Rodrigues2019 - A mathematical model for chemoimmunotherapy of chronic lymphocytic leukemia | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | pass | yes |
| BIOMD0000000880 | Trisilowati2018 - Optimal control of tumor-immune system interaction with treatment | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000881 | Kogan2013 - A mathematical model for the immunotherapeutic control of the TH1 TH2 imbalance in melanoma | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000882 | Munz2009 - Zombie SIZRC | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000883 | Giani2019 - Computational modeling to predict MAP3K8 effects as mediator of resistance to vemurafenib in thyroid cancer stem cells | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000884 | Cortes2019 - Optimality of the spontaneous prophage induction rate. | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | pass | yes |
| BIOMD0000000885 | Sumana2018 - Mathematical modeling of cancer-immune system, considering the role of antibodies. | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000886 | Dubey2008 - Modeling the interaction between avascular cancerous cells and acquired immune response | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000887 | Lim2014 - HTLV-I infection A dynamic struggle between viral persistence and host immunity | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000888 | Unni2019 - Mathematical Modeling, Analysis, and Simulation of Tumor Dynamics with Drug Interventions | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000889 | Fribourg2014 - Model of influenza A virus infection dynamics of viral antagonism and innate immune response. | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000890 | Bhattacharya2014 - A mathematical model of the sterol regulatory element binding protein 2 cholesterol biosynthesis pathway | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000891 | Khajanchi2019 - Stability Analysis of a Mathematical Model forGlioma-Immune Interaction under OptimalTherapy | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000892 | Sandip2013 - Modeling the dynamics of hepatitis C virus with combined antiviral drug therapy: interferon and ribavirin. | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000893 | GonzalezMiranda2013 - The effect of circadian oscillations on biochemical cell signaling by NF-κB | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000894 | Bose2011 - Noise-assisted interactions of tumor and immune cells | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000895 | Schokker2013 - A mathematical model representing cellular immune development and response to Salmonella of chicken intestinal tissue | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000896 | Szymanska2009 - Mathematical modeling of heat shock protein synthesis in response to temperature change | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000897 | Khajanchi2015 - The combined effects of optimal control in cancer remission | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000898 | Jiao2018 - Feedback regulation in a stem cell model with acute myeloid leukaemia | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000899 | Ota2015 - Positive regulation of Rho GTPase activity by RhoGDIs as a result of their direct interaction with GAPs (GDI integrated) | Reactions, FunctionDefinitions, layout:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000000900 | Bianca2013 - Persistence analysis in a Kolmogorov-type model for cancer-immune system competition | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000901 | ChowHall2008 Dynamics of Human Weight Change_ODE_1 | Events, AssignmentRules, RateRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000902 | Wang2019 - A mathematical model of oncolytic virotherapy with time delay | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000903 | Solis-perez2019 - A fractional mathematical model of breast cancer competition model | Reactions, FunctionDefinitions | pass | pass | fail | pass | pass | yes |
| BIOMD0000000904 | Admon2017 - Modelling tumor growth with immune response and drug using ordinary differential equations | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000905 | Dubey2007 - A mathematical model for the effect of toxicant on the immune system (with toxicant effect) Model2 | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000906 | Dubey2007 - A mathematical model for the effect of toxicant on the immune system (without toxicant effect) Model1 | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000907 | HeberleRazquinNavas2019 - The PI3K and MAPK/p38 pathways control stress granuleassembly in a hierarchical manner model 3 | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000908 | dePillis2013 - Mathematical modeling of regulatory T cell effects on renal cell carcinoma treatment | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000909 | dePillis2003 - The dynamics of an optimally controlled tumor model: A case study | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000910 | Isaeva2008 - Modelling of Anti-Tumour Immune Response Immunocorrective Effect of Weak Centimetre Electromagnetic Waves | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000911 | Merola2008 - An insight into tumor dormancy equilibrium via the analysis of its domain of attraction | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000912 | Caravagna2010 - Tumour suppression by immune system | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000913 | dePillis2008 - Optimal control of mixed immunotherapy and chemotherapy of tumors | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000914 | Parra_Guillen2013 -  Mathematical model approach to describe tumour response in mice after vaccine administration_model1 | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000915 | Sun2018 - Instantaneous mutation rate in cancer initiation and progression | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000916 | Kraan199_Kinetics of Cortisol Metabolism and Excretion. | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000917 | Phillips2007_AscendingArousalSystem_SleepWakeDynamics | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000918 | Schwarz2018-Cdk Activity Threshold Determines Passage through the Restriction Point | Reactions, Events, FunctionDefinitions | pass | pass | fail | pass | fail | yes |
| BIOMD0000000919 | Ledzewicz2013 - On optimal chemotherapy with a strongly targeted agent for a model of tumor immune system interactions with generalized logistic growth | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000920 | Jarrett2015 - Modelling the interaction between immune response, bacterial dynamics and inflammatory damage | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000921 | Khajanchi2017 - Uniform Persistence and Global Stability for a Brain Tumor and Immune System Interaction | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000922 | Turner2015-Human/Mosquito ELP Model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000923 | Liò2012_Modelling osteomyelitis_Control Model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000924 | Smith2011 - Three Stage Innate Immune Response to a Pneumococcal Lung Infection | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | pass | yes |
| BIOMD0000000925 | Dunster2016 - Nondimensional Coagulation Model | Reactions, FunctionDefinitions, AssignmentRules, layout:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000000926 | Rhodes2019 - Immune-Mediated theory of Metastasis | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000927 | Grigolon2018-Responses to auxin signals | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000928 | Baker2017 - The role of cytokines, MMPs and fibronectin fragments osteoarthritis | Reactions, Events, FunctionDefinitions | pass | pass | fail | pass | fail | yes |
| BIOMD0000000929 | Li2016 - Model for pancreatic cancer patients receiving immunotherapy | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000930 | Liu2017 - chemotherapy targeted model of tumor immune system | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000931 | Voliotis2019-GnRH Pulse Generation | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000932 | Garde2020-Minimal model describing metabolic oscillations in Bacillus subtilis biofilms | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000933 | Kosiuk2015-Geometric analysis of the Goldbeter minimal model for the embryonic cell cycle | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000934 | Linke2017 - Synchronization of Cyclins' expression by the Fkh2 transcription factor in the budding yeast cell cycle | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000935 | Ferrel2011 - Cdk1 and APC regulation in cell cycle in Xenopus laevis | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000936 | ferrel2011 - autonomous biochemical oscillator in cell cycle in Xenopus laevis v2 | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000937 | Ferrel2011 - Autonomous biochemical oscillator in regulation of CDK1, Plk1, and APC in Xenopus Laevis cell cycle | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000938 | Gerard2013 - Model 3 - Embryonic-type eukaryotic Cell Cycle regulation based on negative feedback between Cdk/cyclin and APC and competitive inhibition between Cdk/cyclin and securin for polyubiquitylation_1 | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000939 | Iwamoto2010 - Cell cycle reponse to DNA damage | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000940 | Tang2019 - Pharmacology modelling of AURKB and ZAK interaction in TNBC | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000941 | Gerard2010 - Progression of mammalian cell cycle by successive activation of various cyclin cdk complexes | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000942 | Sible2007 - Mitotic cell cycle mecanism in Xenopus Laevis | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000943 | Hat2016 - Reponse of p53 System to irradiation in cell fate decision making | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000944 | Goldbeter2013-Oscillatory activity of cyclin-dependent kinases in the cell cycle | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000945 | Evans2004 - Cell based mathematical model of topotecan | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000946 | Evans2005 - Compartmental model for antineoplastic drug topotecan in breast cancer cells | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000947 | Lee2017 - Paracetamol first-pass metabolism PK model | AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000948 | Landberg2009 - Alkylresorcinol Dose Response | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000949 | Chitnis2008 - Mathematical model of malaria transmission | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000950 | Chitnis2012 - Model Rift Valley Fever transmission between cattle and mosquitoes (Model 1) | InitialAssignments, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000951 | Mitrophanov2015 - Simulating extended Hockin Blood Coagulation Model under varied pH | Reactions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000952 | Rodenfels2019 - Heat Oscillations Driven by the Embryonic Cell Cycle Reveal the Energetic Costs of Signaling | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000953 | Queralt2006 - Initiation of mitotic exit by downregulation of PP2A in budding yeast | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000954 | Pandey2018-reversible transition between quiescence and proliferation | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000955 | Giordano2020 - SIDARTHE model of COVID-19 spread in Italy | Reactions, Events, FunctionDefinitions, InitialAssignments | pass | pass | fail | pass | fail | yes |
| BIOMD0000000956 | Bertozzi2020 - SIR model of scenarios of COVID-19 spread in CA and NY | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000957 | Roda2020 - SIR model of COVID-19 spread in Wuhan | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000958 | Ndairou2020 - early-stage transmission dynamics of COVID-19 in Wuhan | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000959 | Kok2020 - IFNalpha-induced signaling in Huh7.5 cells | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000960 | Paiva2020 - SEIAHRD model of transmission dynamics of COVID-19 | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000961 | McDougal2017 - Metabolism in ischemic cardiomyocytes | Reactions, Events, FunctionDefinitions, AssignmentRules, layout:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000000962 | Zhao2020 - SUQC model of COVID-19 transmission dynamics in Wuhan, Hubei, and China | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000963 | Weitz2020 - SIR model of COVID-19 transmission with shielding | Reactions, Events, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000964 | Mwalili2020 - SEIR model of COVID-19 transmission and environmental pathogen prevalence | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000000965 | LeBeau1999 - IP3-dependent intracellular calcium oscillations due to agonist stimulation from Cholecytokinin | Reactions, FunctionDefinitions, AssignmentRules, RateRules, layout:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000000966 | Cui2008 - in vitro transcriptional response of zinc homeostasis system in Escherichia coli | Reactions, FunctionDefinitions, layout:package, render:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000000967 | McLean1991 - Behaviour of HIV in the presence of zidovudine | Reactions, FunctionDefinitions, layout:package, render:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000000968 | Palmer2008 - Negative Feedback in IL-7 mediated Jak-Stat signaling | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000969 | Cuadros2020 - SIHRD spatiotemporal model of COVID-19 transmission in Ohio | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000970 | Hou2020 - SEIR model of COVID-19 transmission in Wuhan | Reactions, FunctionDefinitions, InitialAssignments | pass | pass | pass | pass | pass | yes |
| BIOMD0000000971 | Tang2020 - Estimation of transmission risk of COVID-19 and impact of public health interventions | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000972 | Tang2020 - Estimation of transmission risk of COVID-19 and impact of public health interventions - update | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000973 | Dasgupta2020 - Reduced model of receptor clusturing and aggregation | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000974 | Carcione2020 - Deterministic SEIR simulation of a COVID-19 outbreak | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000975 | Leloup2004 - Mammalian Circadian Rhythm models for 23.8 and 24.2 hours timeperiod | Reactions, FunctionDefinitions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000976 | Ghanbari2020 - forecasting the second wave of COVID-19 in Iran | Reactions, Events, FunctionDefinitions | pass | pass | fail | pass | fail | yes |
| BIOMD0000000977 | Sarkar2020 - SAIR model of COVID-19 transmission with quarantine measures in India | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000978 | Mukandavire2020 - SEIR model of early COVID-19 transmission in South Africa | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000979 | Malkov2020 - SEIRS model of COVID-19 transmission with reinfection | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000980 | Malkov2020 - SEIRS model of COVID-19 transmission with time-varying R values and reinfection | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000981 | Wan2020 - risk estimation and prediction of the transmission of COVID-19 in maninland China excluding Hubei province | Reactions, FunctionDefinitions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000982 | Law2020 - SIR model of COVID-19 transmission in Malyasia with time-varying parameters | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000983 | Zongo2020 - model of COVID-19 transmission dynamics under containment measures in France | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000984 | Fang2020 - SEIR model of COVID-19 transmission considering government interventions in Wuhan | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000985 | Gex-Fabry1984 - model of receptor-mediated endocytosis of EGF in BALB/c 3T3 cells | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000986 | Aubry1995 - Multi-compartment model of fluid-phase endocytosis kinetics in Dictyostelium discoideum | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000000987 | Aubry1995 - Nine-compartment model of fluid-phase endocytosis kinetics in Dictyostelium discoideum | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000988 | Westerhoff2020 - systems biology model of the coronavirus pandemic 2020 | Reactions, FunctionDefinitions, AssignmentRules, layout:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000000989 | Strasen2018 - TGFb SMAD Signalling - Dose dependent dynamics upon TGFb stimulation | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000990 | Strasen2018 - TGFb SMAD Signalling - Degradation of 25pM ligand (TGFb) | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000991 | Okuonghae2020 - SEAIR model of COVID-19 transmission in Lagos, Nigeria | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000994 | Strasen2018 - TGFb SMAD Signalling - Restimulation with 5pM TGFb at 3hr | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000995 | Strasen2018 - TGFb SMAD Signalling - Restimulation with 5pM TGFb at 8hr | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000996 | Strasen2018 - TGFb SMAD Signalling - Restimulation with 100pM TGFb at 6hr | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000000997 | Strasen2018 - TGFb SMAD Signalling - DRB treatment | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000998 | Strasen2018 - TGFb SMAD Signalling Class 1 | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000000999 | Strasen2018 - TGFb SMAD Signalling Class 2 | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001000 | Strasen2018 - TGFb SMAD Signalling Class 3 | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001001 | Strasen2018 - TGFb SMAD Signalling Class 4 | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001002 | Strasen2018 - TGFb SMAD Signalling Class 5 | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001003 | Strasen2018 - TGFb SMAD Signalling Class 6 | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001004 | Intosalmi2015 - Th17 core network model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001005 | Bae2017 - Mathematical analysis of circadian disruption and metabolic re-entrainment of hepatic gluconeogenesis | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001006 | Ciliberto2005 - Steady states and oscillations in the p53/Mdm2 network | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000001007 | Zhang2007 - Mechanism of DNA damage response (Model1) | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001008 | Scaramellini1997 - Two-receptor:One-transducer (2R1T) model for analysis of interactions between agonists | AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000001009 | Zhang2007 - Mechanism of DNA damage response (Model2) | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001010 | Zhang2007 - Mechanism of DNA damage response (Model3) | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001011 | Leon-Triana2020 - CAR T-cell therapy in B-cell acute lymphoblastic leukaemia | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001012 | Leon-Triana2020 - CAR T-cell therapy in B-cell acute lymphoblastic leukaemia with contribution from immature B cells | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001013 | Leon-Triana2021 - Competition between tumour cells and single-target CAR T-cells | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001014 | Leon-Triana2021 - Competition between tumour cells and dual-target CAR T-cells | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001015 | Jarrah2014 - mathematical model of the immune response in muscle degeneration and subsequent regeneration in Duchenne muscular dystrophy in mdx mice | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001016 | Bakshi2020 - Truncated minimal model of alternative pathway of complement system | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001017 | Bakshi2020 - Minimal model of alternative pathway of complement system | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001018 | Bakshi2020 - Properdin model of alternative pathway of complement system | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001019 | Barros2021 - CARTmath, Mathematical Model of CAR-T Immunotherapy in HDLM-2 cell line | Reactions, Events, FunctionDefinitions | pass | pass | fail | pass | fail | yes |
| BIOMD0000001020 | Barros2021 - CARTmath, Mathematical Model of CAR-T Immunotherapy in Raji Cell Line | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000001021 | Lavigne2021 - Non-spatial model of viral infection dynamics and interferon response of well-mixed viral infection | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001022 | Creemers2021 - Tumor-immune dynamics and implications on immunotherapy responses | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001023 | Alharbi2020 - An ODE-based model of the dynamics of tumor cell progression and its effects on normal cell growth and immune system functionality | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001024 | Chaudhury2020 - Lotka-Volterra mathematical model of CAR-T cell and tumour kinetics | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001025 | Chaudhury2020 - EC50 expansion and killing mathematical model of CAR-T cell and tumour kinetics | Reactions, FunctionDefinitions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001026 | Kurlovics2021 - Metformin partitioning between plasma and RBC with independent Kin and Kout coefficients | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001027 | Zake2021 - PBPK model of metformin in mice: single dose peroral | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000001028 | Zake2021 - PBPK model of metformin in humans, single PO dose | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000001029 | Zake2021 - PBPK model of metformin in humans, eight PO administrations with 12h interval | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000001030 | Sontag2017 - Dynamic model of immune responses to antigen presentation by tumor or pathogen | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | no |
| BIOMD0000001031 | Al-Tuwairqi2020 - Dynamics of cancer virotherapy - Phase I treatment | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001032 | Al-Tuwairqi2020 - Dynamics of cancer radiovirotherapy - Phase II treatment | Reactions, Events, FunctionDefinitions | pass | pass | fail | pass | fail | yes |
| BIOMD0000001033 | Almuallem2020 - Virus-macrophage-tumour interactions in oncolytic viral therapies | Reactions, FunctionDefinitions | pass | pass | fail | pass | pass | yes |
| BIOMD0000001034 | Bunimovich-Mendrazitsky2007 - Mathematical model of BCG immunotherapy | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001035 | Al-Tuwairqi2020 - Dynamics of cancer virotherapy with immune response | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001036 | Cappuccio2007 - Tumor-immune system interactions and determination of the optimal therapeutic protocol in immunotherapy | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001037 | Alharbi2019 - Tumor-normal model (TNM) of the development of tumor cells and their impact on normal cell dynamics | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001038 | Alharbi2019 - Tumor-normal-vitamins model (TNVM) of the effects of vitamins on delaying the growth of tumor cells | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001039 | Zake2021 - PBPK model of metformin in mice: single dose intavenous | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001040 | Kurlovics2021 - Metformin partitioning from plasma to RBC,  single coefficient | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001041 | Kimmel2021 - T cell competition and stochastic extinction events in CAR T cell therapy | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001042 | Makhlouf2020 - No treatment model of the role of CD4 T cells in tumor-immune interactions | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001043 | Wodarz2001 - Viruses as antitumor weapons | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | fail | pass | fail | yes |
| BIOMD0000001044 | Csikasz-Nagy2006 - Mammalian Cell Cycle model | Reactions, Events, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001045 | Smith&Moore2004 - The SIR model for the spread of HongKong Flu | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001047 | Collier1996 - Delta Notch intercellular signalling and lateral inhibition | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001048 | Siddhartha2002 - Kinetic modelling of cancer therapies | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001052 | Alharbi2020 - Tumor and immune system competition | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001053 | Garde2020 - metabolic oscillations in Bacillus subtilis biofilms | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001054 | Pearce2021 - Fibrin Polymerization | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001055 | Jeon2018 - Enzyme clustering in Glucose metabolism | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001056 | Chulian2021 - feedback signalling in B lymphopoeisis | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001057 | Nikolov2020 - p53-miR34 model | Reactions, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001058 | Novak2022 - Mitotic kinase oscillation | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001059 | Stucki2005 - caspase-3 metabolism | Reactions, Events, FunctionDefinitions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001060 | Frank2021 - Macrophage polarization | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001065 | vonDassow2000 - Segment Polarity Network model on 1x4 grid of cells | Reactions, FunctionDefinitions, AssignmentRules, layout:package, render:package | pass | pass | pass | pass | pass | yes |
| BIOMD0000001072 | Phillips2013 - physiologically based modeling explaining Mammalian rest/activity patterns | Reactions, Events, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001077 | Adlung2021 - Cell-to-cell variability in JAK2/STAT5 pathway | Reactions, FunctionDefinitions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001078 | Hammaren-Geissen2022_PPToP_Model12 | Reactions, InitialAssignments, AssignmentRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001079 | DeBoeck2021 - Modular approach to modeling the cell cycle, simple cell cycle model | Reactions, FunctionDefinitions, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001080 | DeBoeck2021 - Modular approach to modeling the cell cycle, 5 ODE model with 3 bistable switches | Reactions, FunctionDefinitions, AssignmentRules, RateRules | pass | pass | pass | pass | pass | yes |
| BIOMD0000001096 | Irani2015 - Genome-scale metabolic model of P.pastoris N-glycosylation | Reactions | pass | pass | pass | pass | pass | yes |
| BIOMD0000001098 | Feist2006_methanogenesis_OptiMethanol | Reactions | pass | pass | fail | pass | fail | no |
| BIOMD0000001099 | Richards2016 - Genome-scale metabolic reconstruction of Methanococcus maripaludis (iMR539) | Reactions | pass | pass | fail | pass | fail | no |
| BIOMD0000001102 | Burbano2023 - HGFsignaling_in_FattyLiverDisease | Reactions, InitialAssignments | pass | pass | pass | pass | pass | yes |
| BIOMD0000001103 | Palaniappan2021 - Cell free modelling of second generation Toehold switches | Reactions, FunctionDefinitions, AssignmentRules | pass | pass | pass | pass | pass | no |

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/index.md -->

# API reference

The API reference is generated from the docstrings of the package.

| module | description |
| --- | --- |
| [sbml2cellml](sbml2cellml.md) | Conversion of SBML models to CellML, `convert_sbml2cellml` |
| [cellml2sbml](cellml2sbml.md) | Conversion of CellML models to SBML, `convert_cellml2sbml` |
| [cellml](cellml.md) | Reading, writing and validating CellML models with libcellml |
| [sbml](sbml.md) | Reading, writing and validating SBML documents with libsbml |
| [mathml](mathml.md) | MathML fragments of the equations |
| [astnodes](astnodes.md) | Construction of formulas as libsbml ASTs |
| [metadata](metadata.md) | Names, notes and annotations of the SBML elements as RDF next to the CellML model |
| [sbmlmath](sbmlmath.md) | CellML maths (analyser AST, MathML) to libsbml ASTs |
| [units](units.md) | CellML units to SBML unit definitions |
| [cellmlunits](cellmlunits.md) | SBML units to CellML units, the units of the variables |
| [variables](variables.md) | SBML ids of the CellML variables |
| [simulate](simulate.md) | Timecourse simulation with libopencor (optional dependency) |
| [cli](cli.md) | The `sbml2cellml` and `cellml2sbml` commands |
| [console](console.md) | Shared rich console |
| [log](log.md) | Logging of the package |

## sbml2cellml.testsuite

The `sbml2cellml-testsuite` command runs the [SBML test suite](https://github.com/sbmlteam/sbml-test-suite) through both converters and both simulators, see [SBML test suite](../testsuite.md) and [Development](../development.md#sbml-test-suite).

| module | description |
| --- | --- |
| [testsuite.cases](testsuite.cases.md) | Downloading the suite, reading and filtering the semantic test cases |
| [testsuite.compare](testsuite.compare.md) | Comparison of a simulation with the expected results of a case |
| [testsuite.simulators](testsuite.simulators.md) | The roadrunner and libopencor simulator functions run inside a worker |
| [testsuite.worker](testsuite.worker.md) | Simulators in their own processes |
| [testsuite.runner](testsuite.runner.md) | The pipeline of the harness, five stages per case |
| [testsuite.results](testsuite.results.md) | Results of a suite run: per case and stage, JSON, regressions |
| [testsuite.report](testsuite.report.md) | Markdown report of a suite run, the page `docs/testsuite.md` |
| [testsuite.figure](testsuite.figure.md) | Bar diagram of a suite run, the figures `docs/images/testsuite*.svg` |
| [testsuite.cli](testsuite.cli.md) | The `sbml2cellml-testsuite` command |

## sbml2cellml.biomodels

The `sbml2cellml-biomodels` command runs the manually curated SBML models of [BioModels](https://www.biomodels.org) through the pipeline of the test suite, see [BioModels](../biomodels.md) and [Development](../development.md#biomodels).

| module | description |
| --- | --- |
| [biomodels.models](biomodels.models.md) | Access to the BioModels database: search, model info, download, selection |
| [biomodels.cases](biomodels.cases.md) | Case construction for a BioModels model |
| [biomodels.runner](biomodels.runner.md) | Runner producing the results from a BioModels selection |
| [biomodels.cli](biomodels.cli.md) | The `sbml2cellml-biomodels` command |

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/sbml2cellml.md -->

# sbml2cellml.sbml2cellml

Conversion of SBML models to CellML 2.0.

The conversion puts every SBML compartment, parameter and species as a variable
into a single CellML component `sbml`, together with the variable of
integration `time`. Assignment rules become equations, rate rules
differential equations. Every reaction with a kinetic law is a variable of its
rate, the rates of its reactions are the differential equation of a species.
The target of an
assignment rule has no initial value, the rule defines it at all times. A
species in concentration whose compartment changes gets a second variable
`<species>_amount`: the reactions change the amount, the concentration is the
amount per size of the compartment. The
unit definitions and the units of numbers are converted, the units of the
variables when the unit annotation of the model is complete
(`sbml2cellml.cellmlunits`), else all variables are `dimensionless`.

Every formula stays the AST libsbml reads from the model, new formulas are
built from nodes (`sbml2cellml.astnodes`): as text an id such as `avogadro`,
`pi` or `NaN` would be read back as the symbol of that name.

CellML has no functions: the calls of SBML function definitions are replaced
by the bodies of the functions (libsbml's `expandFunctionDefinitions`
conversion) before the conversion, and the initial assignments are evaluated
to initial values (`expandInitialAssignments`).

Not supported yet (logged as warning, see docs/conversion-issues.md): events.

## class `SBML2CellMLConversionError`

The SBML document cannot be converted.

## function `convert_sbml2cellml(sbml_path: pathlib.Path, cellml_path: pathlib.Path | None = None, validate: bool = True, metadata: bool = True) -> libcellml.model.Model`

Convert an SBML file to a CellML model.

Args:
    sbml_path: path of the SBML file.
    cellml_path: path the CellML is written to, not written if `None`.
    validate: validate and analyse the CellML model with libcellml and
        raise if it has errors.
    metadata: write the names, notes, SBO terms, annotations and the
        history of the SBML elements as RDF next to the CellML file
        (`<stem>.rdf`, see `sbml2cellml.metadata`); no file is written
        for a model without metadata.

Returns:
    The CellML model.

Raises:
    SBML2CellMLConversionError: if the file does not exist or has no model.
    CellMLValidationError: if `validate` is set and the model has errors.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/cellml2sbml.md -->

# sbml2cellml.cellml2sbml

Conversion of CellML 2.0 models to SBML level 3 version 2.

The libcellml analyser classifies the variables and equations of the model
and resolves the connections between components; the converter renders its
model as SBML: every variable is a parameter, states get rate rules,
algebraic variables assignment rules, computed constants initial assignments,
and the resets of the components become events. CellML units become unit
definitions. There are no compartments, species or reactions.

The metadata of an SBML model which `sbml2cellml` wrote next to the CellML
file (`sbml2cellml.metadata`) comes back on the parameters, the unit
definitions and the model.

## class `CellML2SBMLConversionError`

The CellML model cannot be converted.

## function `build_document(model: libcellml.model.Model, analyser_model: Any, records: dict[str, sbml2cellml.metadata.Record] | None = None) -> libsbml.SBMLDocument`

Build the SBML document of an analysed CellML model.

Args:
    model: the (flattened) CellML model.
    analyser_model: its analyser model without errors.
    records: metadata by the id of a CellML element
        (`sbml2cellml.metadata.read_metadata`), none when `None`.

Returns:
    The SBML document, not validated.

Raises:
    MathConversionError: for a construct which cannot be converted;
        `convert_cellml2sbml` wraps it.
    UnitsConversionError: for units which cannot be converted;
        `convert_cellml2sbml` wraps it.

## function `convert_cellml2sbml(cellml_path: pathlib.Path, sbml_path: pathlib.Path | None = None, validate: bool = True, metadata: bool = True) -> libsbml.SBMLDocument`

Convert a CellML file to an SBML document.

Args:
    cellml_path: path of the CellML file; imports are resolved relative to it.
    sbml_path: path the SBML is written to, not written if `None`.
    validate: check the consistency of the document with libsbml and raise
        if it has errors.
    metadata: read the metadata from the RDF file next to the CellML file
        (`<stem>.rdf`, see `sbml2cellml.metadata`) when it exists.

Returns:
    The SBML document.

Raises:
    CellML2SBMLConversionError: if the file does not exist, the imports
        cannot be resolved, the analyser reports errors, the model is not
        an ODE or algebraic model, or a construct is not supported.
    CellMLValidationError: if the file cannot be parsed.
    SBMLValidationError: if `validate` is set and the document has errors.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/cellml.md -->

# sbml2cellml.cellml

Reading, writing and validating CellML models with libcellml.

The functions wrap the libcellml `Parser`, `Printer`, `Validator` and
`Analyser`. Issues are returned instead of printed, so a caller decides what
to do with them; `errors` filters the issues of level `ERROR`.

## class `CellMLValidationError`

A CellML model has issues of level ERROR.

## function `errors(issues: 'list[libcellml.Issue]') -> 'list[libcellml.Issue]'`

The issues of level ERROR.

Args:
    issues: issues of a libcellml logger.

Returns:
    The subset of issues with level `ERROR`.

## function `format_issue(issue: 'libcellml.Issue') -> 'str'`

Format an issue as `[LEVEL] description`.

Args:
    issue: issue of a libcellml logger.

Returns:
    The one line description of the issue.

## function `format_issues(issues: 'list[libcellml.Issue]') -> 'str'`

Format issues as one line per issue.

Args:
    issues: issues of a libcellml logger.

Returns:
    The formatted issues joined by newlines.

## function `model_to_string(model: 'libcellml.Model') -> 'str'`

Serialize a model to CellML 2.0.

Args:
    model: CellML model.

Returns:
    The CellML xml.

## function `read_model(cellml_path: 'Path') -> 'libcellml.Model'`

Read a CellML file.

Args:
    cellml_path: path of the CellML file.

Returns:
    The parsed model.

Raises:
    CellMLValidationError: if the parser reports errors.

## function `validate_model(model: 'libcellml.Model') -> 'list[libcellml.Issue]'`

Validate and analyse a model.

The validator checks the model against the CellML specification, the
analyser checks that the equations define every variable exactly once.

Args:
    model: CellML model.

Returns:
    The issues of the validator followed by the issues of the analyser,
    empty for a valid model.

## function `write_model(model: 'libcellml.Model', cellml_path: 'Path') -> 'None'`

Write a model as CellML file.

Args:
    model: CellML model.
    cellml_path: path of the file, overwritten if it exists.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/sbml.md -->

# sbml2cellml.sbml

Reading, writing and validating SBML documents with libsbml.

The counterpart of `sbml2cellml.cellml` for the SBML side: errors are returned
as messages instead of printed, `SBMLValidationError` is raised by the callers
which want to stop on them.

## class `SBMLValidationError`

An SBML document has errors.

## function `document_to_string(doc: libsbml.SBMLDocument) -> str`

Serialize a document to SBML xml.

Args:
    doc: SBML document.

Returns:
    The SBML xml.

## function `read_document(sbml_path: pathlib.Path) -> libsbml.SBMLDocument`

Read an SBML file.

Args:
    sbml_path: path of the SBML file.

Returns:
    The document.

Raises:
    SBMLValidationError: if the file cannot be read or has no model.

## function `validate_document(doc: libsbml.SBMLDocument) -> list[str]`

Check the consistency of a document.

Runs the libsbml consistency checks (units, identifiers, MathML, SBO,
modeling practice). Unit problems are reported by libsbml as warnings and
are not part of the result. The error log of the document is cleared
before the check.

Args:
    doc: SBML document.

Returns:
    The messages of severity error or fatal, empty for a consistent document.

## function `write_document(doc: libsbml.SBMLDocument, sbml_path: pathlib.Path) -> None`

Write a document as SBML file.

Args:
    doc: SBML document.
    sbml_path: path of the file, overwritten if it exists.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/mathml.md -->

# sbml2cellml.mathml

MathML helpers for the math of a CellML component.

libsbml renders a formula as a complete MathML document, i.e., with an xml
declaration and a `math` element. CellML takes the equations of a component as
one `math` element, so the rendered fragments are stripped of the declaration
and the element, combined, and wrapped in a `math` element which declares the
`cellml` namespace for the units of numbers. The `sbml:units` attribute of
libsbml becomes `cellml:units`.

CellML requires units on every number and only knows real and e-notation
numbers: a number without units gets `dimensionless`, the units of a number
with units become their CellML name (`sbml2cellml.cellmlunits`), integers and
rationals become reals.
CellML has no symbols either: the SBML time symbol becomes the variable of
integration `TIME_ID`, avogadro its value.
An n-ary operator with less than two arguments is replaced by its value.
The negation of a product which starts with a negation is cancelled, libcellml
generates code for it which does not compile (`cancel_negations`).

A formula is a libsbml AST, or text in the syntax of libsbml (`k1 * S1`), in
which a name which is a symbol of the syntax (`avogadro`, `pi`, `NaN`, `time`)
is that symbol and not an id of the model; the converter passes ASTs.

## class `MathMLError`

A formula cannot be rendered as MathML.

## function `cancel_negations(node: libsbml.ASTNode) -> libsbml.ASTNode`

Cancel the negation of a product or quotient which starts with a negation.

libcellml 0.7.1 generates the code of a negated product without
parentheses: `-((-2) * a)` becomes `--2.0*a`, a decrement in C, and the
model does not compile in libopencor. `-((-a) * b)` is `a * b` and
`-((-a) / b)` is `a / b`, exactly. A negative number is such a negation
once `normalize_math` has run. Other negations are generated with
parentheses and stay.

Args:
    node: root of the libsbml AST of the formula, changed in place.

Returns:
    The root, which is another node when the root itself was replaced.

## function `cellml_math(parts: list[str]) -> str`

Combine equation fragments into the math element of a component.

Args:
    parts: `apply` elements, e.g., from `mathml_for_assignment`.

Returns:
    The complete `math` element with the MathML and cellml namespaces.

## function `mathml_for_algebraic(formula: Formula, units: UnitsNames | None = None) -> str`

MathML of the implicit equation `0 = formula`.

Args:
    formula: the expression which is zero, see
        `process_mathml_for_cellml`.
    units: CellML units of the SBML units of a number, see
        `normalize_math`.

Returns:
    The `apply` element of the equation.

## function `mathml_for_assignment(vid: str, formula: Formula, units: UnitsNames | None = None, number_units: str = 'dimensionless') -> str`

MathML of the assignment `vid = formula`.

Args:
    vid: id of the assigned variable.
    formula: right hand side, see `process_mathml_for_cellml`.
    units: CellML units of the SBML units of a number, see
        `normalize_math`.
    number_units: CellML units of a number without units, e.g. the units
        of `vid` when the formula is its value.

Returns:
    The `apply` element of the equation.

## function `mathml_for_diff(vid: str, formula: Formula, ivid: str = 't', units: UnitsNames | None = None) -> str`

MathML of the differential equation `d vid / d ivid = formula`.

Args:
    vid: id of the state variable.
    formula: right hand side, see `process_mathml_for_cellml`.
    ivid: id of the variable of integration.
    units: CellML units of the SBML units of a number, see
        `normalize_math`.

Returns:
    The `apply` element of the equation.

## function `normalize_math(node: libsbml.ASTNode, units: UnitsNames | None = None, number_units: str = 'dimensionless') -> None`

Make the numbers and symbols of a formula valid CellML, in place.

The time symbol becomes a reference to the variable of integration
`TIME_ID`, avogadro a number with libsbml's value. Integers and
rationals become reals, a finite number without units gets
`number_units`, the units of a number with units their CellML name. A
negative number becomes the negative of a number: the code libcellml
generates for the negative of a negative number is `--1.0`, a decrement
in C which does not compile.
Infinity and NaN stay as they are, they are written as
the `infinity` and `notanumber` constants, which have no units. The
delay and rateOf symbols stay, CellML has no counterpart for them.

Args:
    node: root of the libsbml AST of the formula.
    units: CellML units of the SBML units of a number
        (`CellMLUnits.number_units`), the same name when `None`.
    number_units: CellML units of a number without units.

## function `process_mathml_for_cellml(formula: Formula, units: UnitsNames | None = None, number_units: str = 'dimensionless') -> str`

Render a formula as a MathML fragment for CellML.

Args:
    formula: the AST of the formula, which is not changed, or the formula
        in the SBML level 3 infix syntax, e.g., `k1 * S1`.
    units: CellML units of the SBML units of a number, see
        `normalize_math`.
    number_units: CellML units of a number without units.

Returns:
    The MathML of the formula without xml declaration and `math` element,
    with `cellml:units` on every finite number and the time and
    avogadro symbols replaced (see `normalize_math`).

Raises:
    MathMLError: if a formula given as text does not parse.

## function `simplify_operators(node: libsbml.ASTNode) -> libsbml.ASTNode`

Replace n-ary operators with less than two arguments.

MathML allows `plus`, `times`, `and`, `or` and `xor` with one argument
(the argument) and without any (the identity element), CellML requires
two.

Args:
    node: root of the libsbml AST of the formula, changed in place.

Returns:
    The root, which is another node when the root itself was replaced.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/astnodes.md -->

# sbml2cellml.astnodes

Construction of formulas as libsbml ASTs.

The converter keeps every formula as the AST libsbml reads from the model and
builds the new ones (reaction terms, amounts, rates) from nodes. A formula as
text in the syntax of libsbml cannot tell an id from a symbol of the syntax:
a parameter `avogadro`, `pi` or `NaN` would be read back as the constant.

## function `apply(operator: int, *arguments: libsbml.ASTNode) -> libsbml.ASTNode`

An operator or function applied to copies of its arguments.

Args:
    operator: type of the node, e.g. `libsbml.AST_TIMES`.
    arguments: the arguments in their order, they are not changed.

## function `name(sid: str) -> libsbml.ASTNode`

The reference to the element of an id, never a symbol of that name.

## function `number(value: float, units: str | None = None) -> libsbml.ASTNode`

A real number, infinity and NaN included.

Args:
    value: the value.
    units: id of the SBML units of the number, none when `None`.

## function `signed_sum(terms: list[tuple[int, libsbml.ASTNode]]) -> libsbml.ASTNode`

The sum of terms which are added (`AST_PLUS`) or subtracted (`AST_MINUS`).

Args:
    terms: sign and term, at least one; the terms are not changed and
        every term is copied once, whatever the number of terms.

Returns:
    `((-a + b) - c) ...`, the terms in their order.

## function `text(node: libsbml.ASTNode) -> str`

The formula in the syntax of libsbml, for logs and messages only.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/metadata.md -->

# sbml2cellml.metadata

Metadata of an SBML model as RDF next to the CellML model.

CellML 2.0 has no place for metadata: its elements must be in the CellML or
MathML namespace, and the only thing a model offers to the outside is the
`id` of an element. The names, notes, SBO terms, annotations (CV terms) and
the history of the SBML elements therefore go into an RDF/XML file next to
the CellML file, with `<cellml file>#<id>` as the subject of an element, and
`sbml2cellml.cellml2sbml` reads the file back.

The RDF is the one of SBML annotations: `bqbiol` and `bqmodel` qualifiers
with an `rdf:Bag` of resources, the history as `dcterms:creator` (vCard 4),
`dcterms:created` and `dcterms:modified`. libsbml writes and parses it, from
a scratch element of SBML level 3, so that a level 2 model gives the same
RDF. In addition an element has

- `dcterms:title`: its name,
- `dcterms:description`: its notes, the XHTML as an XML literal,
- a first `bqbiol:is` (`bqmodel:is` for the model) with the single resource
  `https://identifiers.org/SBO:...`: its SBO term.

## class `Record(name: str = '', notes: str = '', sbo: str = '', terms: str = '', is_model: bool = False) -> None`

The metadata of one element.

## function `apply_metadata(element: libsbml.SBase, record: sbml2cellml.metadata.Record, metaid: str) -> None`

Set the metadata of a record on an SBML element.

Args:
    element: the SBML element.
    record: its metadata.
    metaid: metaid the element gets when it has CV terms or a history,
        unique in the document.

## function `collect_metadata(elements: dict[str, libsbml.SBase]) -> dict[str, sbml2cellml.metadata.Record]`

The records of the elements which have metadata.

Args:
    elements: SBML element by the id of its CellML element.

Returns:
    The record by the id of the CellML element, in the order of `elements`.

## function `element_record(element: libsbml.SBase) -> sbml2cellml.metadata.Record`

The metadata of an SBML element.

Args:
    element: the model, a compartment, species, parameter, reaction, ...

Returns:
    The record, which is false when the element has no metadata.

## function `read_metadata(path: pathlib.Path, cellml_name: str) -> dict[str, sbml2cellml.metadata.Record]`

Read the records of a CellML model from an RDF/XML file.

Args:
    path: path of the RDF file, as `write_metadata` writes it.
    cellml_name: file name of the CellML model; the subjects of other
        files are ignored.

Returns:
    The record by the id of the CellML element.

Raises:
    ValueError: if the file is not XML.

## function `write_metadata(records: dict[str, sbml2cellml.metadata.Record], cellml_name: str, path: pathlib.Path) -> None`

Write the records as RDF/XML.

Args:
    records: record by the id of the CellML element.
    cellml_name: file name of the CellML model, the subjects are
        `<cellml_name>#<id>`.
    path: path of the RDF file.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/sbmlmath.md -->

# sbml2cellml.sbmlmath

Conversion of CellML maths to libsbml ASTs.

The libcellml analyser gives every equation as a binary tree of
`AnalyserEquationAst` nodes with the variables resolved. `ast_to_sbml` walks
such a tree into a `libsbml.ASTNode`; the variable of integration becomes the
SBML `time` symbol, variables get their SBML id. `mathml_to_sbml` reads the
MathML of a reset with libsbml and remaps the `ci` names the same way.

The analyser AST has the values of the numbers but not their units.
`NumberUnits` reads them from the MathML of the components and finds the
equation of an analyser AST by its variables and numbers.

## class `MathConversionError`

A CellML expression cannot be converted to SBML.

## class `NumberUnits(model: libcellml.model.Model, ids: sbml2cellml.variables.VariableIds, unit_id: collections.abc.Callable[[str], str]) -> None`

Units of the numbers of the equations of a CellML model.

The equations are read from the MathML of the components. An analyser
AST is matched with the equation which has the same variables and
numbers in the same order; the analyser may have rearranged an equation,
which is then found by its variables and numbers in any order and gives
the units by the value of the numbers. An equation is handed out once,
so equations which only differ in their units stay apart.

### `NumberUnits.units_of(self, ast: Any) -> _Units`

Units of the numbers of an equation.

Args:
    ast: root of the analyser AST of the equation.

Returns:
    The units of its numbers from the left to the right, for
    `ast_to_sbml`; `None` when the AST has no numbers or the
    equation is not found (logged).

## function `ast_to_sbml(node: Any, ids: sbml2cellml.variables.VariableIds, units: _Units = None) -> libsbml.ASTNode`

Convert an analyser AST into a libsbml AST.

Args:
    node: `libcellml.AnalyserEquationAst`, e.g. the right child of the
        `EQUALITY` root of an equation.
    ids: SBML ids of the model.
    units: SBML units of the numbers below `node`, from the left to the
        right (`NumberUnits.units_of`); a number takes the next one, no
        units when it is `None`.

Returns:
    The libsbml AST.

Raises:
    MathConversionError: for a node type without SBML counterpart, e.g.
        `DIFF` or `BVAR` outside the left side of an ODE.

## function `count_numbers(node: Any) -> int`

Number of `cn` nodes of an analyser AST.

Args:
    node: `libcellml.AnalyserEquationAst`, may be `None`.

Returns:
    How many units of `NumberUnits.units_of` belong to `node`.

## function `mathml_to_sbml(mathml: str, component_name: str, ids: sbml2cellml.variables.VariableIds, unit_id: collections.abc.Callable[[str], str] | None = None) -> libsbml.ASTNode`

Read CellML MathML with libsbml and remap the variable names.

Used for the maths of resets, which the analyser does not cover. Units on
numbers (`cellml:units`) become `sbml:units`.

Args:
    mathml: complete `math` element.
    component_name: component the MathML belongs to, resolves the names.
    ids: SBML ids of the model.
    unit_id: SBML unit id of a CellML units name, the name itself when
        `None`.

Returns:
    The libsbml AST.

Raises:
    MathConversionError: if the MathML does not parse or a name is unknown.

## function `variable_node(variable: Any, ids: sbml2cellml.variables.VariableIds) -> libsbml.ASTNode`

AST node referencing a CellML variable.

Args:
    variable: libcellml variable.
    ids: SBML ids of the model.

Returns:
    The `time` symbol for the variable of integration, else the name node
    with the SBML id.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/units.md -->

# sbml2cellml.units

Conversion of CellML units to SBML unit definitions.

The standard units of CellML (`second`, `metre`, `kilogram`, `gram`, `mole`,
`litre`, `dimensionless`, `ampere`, `kelvin`, ...) are all unit kinds of SBML
level 3 and are used by name. A custom `Units` becomes a `UnitDefinition`
whose units reference base kinds only: a reference to another custom `Units`
is expanded recursively.

## class `BaseUnit(kind: int, exponent: float, scale: int, multiplier: float) -> None`

One unit of an SBML unit definition: `(multiplier * 10^scale * kind)^exponent`.

## class `UnitsConversionError`

CellML units cannot be converted to SBML.

## function `add_units(model_cellml: libcellml.model.Model, model_sbml: libsbml.Model) -> dict[str, str]`

Add a unit definition for every custom units of a CellML model.

Args:
    model_cellml: CellML model.
    model_sbml: SBML model the definitions are added to.

Returns:
    The SBML unit id by CellML units name, for `unit_id`.

## function `expand_units(units: Any, model: libcellml.model.Model) -> list[sbml2cellml.units.BaseUnit]`

Expand CellML units into SBML base units.

A CellML `unit` stands for `multiplier * (10^prefix * reference)^exponent`,
an SBML unit for `(multiplier * 10^scale * kind)^exponent`: the prefix
becomes the scale and the multiplier its root `multiplier^(1/exponent)`.
A `unit` referencing custom units is expanded recursively, every
resulting exponent multiplied by the outer exponent and the outer factor
`multiplier * 10^(prefix * exponent)` folded into the first resulting
unit. A factor which is left, e.g. of a unit with the exponent 0, becomes
a `dimensionless` unit with that multiplier.

New base units (custom units without any `unit`) have no SBML
counterpart and are dropped with a warning, except for `item`.

Args:
    units: libcellml units.
    model: model the units belong to, resolves references to custom units.

Returns:
    The base units, empty for units without any `unit` (dimensionless).

Raises:
    UnitsConversionError: for an unknown reference or prefix.

## function `prefix_scale(prefix: str) -> int`

Scale of a CellML unit prefix.

Args:
    prefix: SI prefix name (`milli`), an integer string (`-3`) or empty.

Returns:
    The power of ten.

Raises:
    UnitsConversionError: if the prefix is unknown.

## function `unit_id(units_name: str, unit_ids: dict[str, str]) -> str`

SBML unit id of a CellML units name.

Args:
    units_name: name of the units of a variable.
    unit_ids: result of `add_units`.

Returns:
    The unit definition id for custom units, the name itself for standard units.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/cellmlunits.md -->

# sbml2cellml.cellmlunits

Conversion of SBML units to CellML units.

Every unit definition of an SBML model becomes CellML units of the same name.
An SBML unit stands for `(multiplier * 10^scale * kind)^exponent`, a CellML
unit for `multiplier * (10^prefix * reference)^exponent`: the scale becomes
the prefix, together with a multiplier which is a power of ten, and any other
multiplier its power `multiplier^exponent`. The unit kinds
of SBML are the standard units of CellML, except for `item`, which becomes
new base units (units without a unit), and `avogadro`, which becomes the
dimensionless units of that number.

`CellMLUnits` also finds the units of the elements which become variables. A
compartment, a parameter and a species with only substance units reference
their units (a unit definition, a unit kind or the units of the model), a
species in concentration has the units of its substance per the units of its
compartment and the rate of a reaction the units of the extent per the units
of time. For such a quotient the unit definition of the model which is
identical to it is used, else units `numerator_per_denominator` are added.

## class `CellMLUnits(model_sbml: libsbml.Model, model: libcellml.model.Model) -> None`

The CellML units of an SBML model.

### `CellMLUnits.name(self, reference: str) -> str | None`

CellML units of an SBML unit reference.

Args:
    reference: the id of a unit definition, the name of a unit kind
        or units which the SBML level has built in (`substance`).

Returns:
    The name of the CellML units, `None` for an unknown reference.

### `CellMLUnits.number_units(self, reference: str) -> str`

CellML units of the units of a number in a formula.

Args:
    reference: the `sbml:units` of the number.

Returns:
    The name of the CellML units, the reference itself when it is
    unknown (the validation of the CellML model reports it).

### `CellMLUnits.of_amount(self, species: libsbml.Species) -> str | None`

CellML units of the amount of a species, `None` when unknown.

### `CellMLUnits.of_compartment(self, compartment: libsbml.Compartment) -> str | None`

CellML units of the size of a compartment, `None` when unknown.

### `CellMLUnits.of_parameter(self, parameter: libsbml.Parameter | libsbml.LocalParameter) -> str | None`

CellML units of a parameter, `None` when it has none.

### `CellMLUnits.of_reaction(self) -> str | None`

CellML units of the rate of a reaction: extent per time.

### `CellMLUnits.of_species(self, species: libsbml.Species) -> str | None`

CellML units of a species, `None` when unknown.

The units of its substance when it has only substance units or its
compartment no dimensions, else the concentration substance per
size of the compartment.

### `CellMLUnits.per(self, numerator: str, denominator: str) -> str | None`

CellML units of the quotient of two SBML unit references.

Args:
    numerator: SBML unit reference, e.g. the substance units.
    denominator: SBML unit reference, e.g. the units of a compartment.

Returns:
    The name of the unit definition of the model which is identical
    to the quotient, else of the units
    `numerator_per_denominator`, which are added to the CellML model;
    `None` for an unknown reference.

### `CellMLUnits.time(self) -> str | None`

CellML units of time, `None` when the model does not set them.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/variables.md -->

# sbml2cellml.variables

SBML ids of the variables of a CellML model.

libcellml connects variables of different components into equivalence sets,
which the analyser treats as one variable. SBML has one flat id namespace, so
every equivalence set becomes one parameter. The id is the name of the
analyser's representative when no other analyser variable has that name,
otherwise the name is prefixed with the component. Ids are sanitized to SBML
SIds; a sanitized id which is already taken gets a numeric suffix.

## class `VariableIds(analyser_model: libcellml.analysermodel.AnalyserModel) -> None`

SBML ids of the variables of an analysed CellML model.

### `VariableIds.id_for(self, variable: Any) -> str`

SBML id of a libcellml variable.

Args:
    variable: libcellml variable with a parent component.

Returns:
    The SBML id.

Raises:
    KeyError: if the variable is not part of the analysed model.

### `VariableIds.is_voi(self, variable: Any) -> bool`

Whether a libcellml variable is the variable of integration.

### `VariableIds.is_voi_key(self, component_name: str, variable_name: str) -> bool`

Whether a variable is the variable of integration or equivalent to it.

### `VariableIds.lookup(self, component_name: str, variable_name: str) -> str`

SBML id of a variable given by component and name.

Args:
    component_name: name of the component.
    variable_name: name of the variable in that component.

Returns:
    The SBML id.

Raises:
    KeyError: if the variable is not part of the analysed model.

### `VariableIds.reserve(self, sid: str) -> str`

Reserve an SId outside the variables, e.g. for the model or an event.

Args:
    sid: name to sanitize and reserve.

Returns:
    The unique SId, sanitized and made unique among the variable ids
    and every id reserved before it; added to the used ids.

## function `analyser_variables(analyser_model: libcellml.analysermodel.AnalyserModel) -> list[typing.Any]`

Analyser variables of a model other than the voi and the states.

libcellml lists them by type; they are returned as constants, computed
constants, algebraic and external variables, the order of the single
variable list of libcellml 0.6 for ODE and algebraic models, so the
parameters and their ids come out as before.

Args:
    analyser_model: model of a libcellml analyser.

Returns:
    The analyser variables.

## function `equivalence_set(variable: Any) -> list[typing.Any]`

The variable and every variable connected to it, transitively.

Args:
    variable: libcellml variable.

Returns:
    The variables of the equivalence set, the given one first.

## function `sanitize_id(name: str) -> str`

Make a string a valid SBML SId.

Invalid characters become `_`; a leading digit or an empty string gets a
`_` prefix.

Args:
    name: CellML name.

Returns:
    The SId.

## function `unique_sid(sid: str, used: set[str]) -> str`

Make an SId unique among the used ones by appending a numeric suffix.

Args:
    sid: sanitized id.
    used: ids taken so far; the returned id is added to it.

Returns:
    `sid` when free, else `sid_2`, `sid_3`, ... the first free one.

## function `variable_key(variable: Any) -> tuple[str, str]`

`(component name, variable name)` of a variable.

Args:
    variable: libcellml variable with a parent component.

Returns:
    The key.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/simulate.md -->

# sbml2cellml.simulate

Simulation of CellML models with libopencor.

libopencor is part of the `simulate` extra; it is imported when a simulation
runs, so the rest of the package works without it. See `LIBOPENCOR_INSTALL`.

## class `SimulationError`

libopencor reported issues for the file, the document or the run.

## function `plot_timecourse(df: pandas.DataFrame, units: dict[str, str], show: bool = True) -> matplotlib.figure.Figure`

Plot every column of a timecourse against the first column.

Args:
    df: timecourse from `run_timecourse`.
    units: units of the columns from `run_timecourse`.
    show: call `matplotlib.pyplot.show`.

Returns:
    The figure.

## function `run_timecourse(cellml_path: pathlib.Path, start: float = 0.0, end: float = 100.0, steps: int = 100, relative_tolerance: float | None = None, absolute_tolerance: float | None = None, maximum_number_of_steps: int = 100000) -> tuple[pandas.DataFrame, dict[str, str]]`

Run a uniform timecourse of a CellML model.

Args:
    cellml_path: path of the CellML file.
    start: start time of the output.
    end: end time of the output.
    steps: number of steps, the output has `steps + 1` rows.
    relative_tolerance: relative tolerance of the ODE solver, the
        libopencor default when `None`.
    absolute_tolerance: absolute tolerance of the ODE solver, the
        libopencor default when `None`.
    maximum_number_of_steps: number of internal steps the ODE solver may
        take between two time points of the output.

Returns:
    The timecourse with the variable of integration in the first column
    followed by the states, the algebraic variables, the constants and
    the computed constants, and the units of every column. A model
    without a variable of integration (an algebraic model, which
    libopencor solves as a steady state) has the same values at every
    time point, in a first column `time` of the requested time points.

Raises:
    ImportError: if libopencor is not installed.
    SimulationError: if libopencor reports issues, e.g., for a model which
        is not valid or not fully constrained, or two result columns get
        the same name.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/cli.md -->

# sbml2cellml.cli

Command line interfaces of sbml2cellml.

    sbml2cellml INPUT.xml [-o OUTPUT.cellml] [--no-validate] [--no-metadata] [-v]
    cellml2sbml INPUT.cellml [-o OUTPUT.xml] [--no-validate] [--no-metadata] [-v]

convert between SBML and CellML. Without `-o` the output is written next to
the input with the suffix of the other format.

## function `build_parser() -> argparse.ArgumentParser`

Build the argument parser of the `sbml2cellml` command.

Returns:
    The parser.

## function `build_parser_cellml2sbml() -> argparse.ArgumentParser`

Build the argument parser of the `cellml2sbml` command.

Returns:
    The parser.

## function `main(argv: list[str] | None = None) -> int`

Run the `sbml2cellml` command.

Args:
    argv: arguments without the program name, `sys.argv[1:]` by default.

Returns:
    0 on success, 1 on a missing input, a conversion, a validation or an
    I/O error.

## function `main_cellml2sbml(argv: list[str] | None = None) -> int`

Run the `cellml2sbml` command.

Args:
    argv: arguments without the program name, `sys.argv[1:]` by default.

Returns:
    0 on success, 1 on a missing input, a conversion, a validation or an
    I/O error.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/console.md -->

# sbml2cellml.console

Rich console shared by the scripts, examples and the command line.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/log.md -->

# sbml2cellml.log

Logging of the package.

`sbml2cellml` follows the convention for libraries: it only gets loggers and logs
to them, it does not configure logging. Handlers, levels and formatting are left
to the application, which keeps the messages of the package under the control of
whoever uses it.

Modules get their logger from the standard library with

```python
import logging

logger = logging.getLogger(__name__)
```

All loggers are therefore below the `sbml2cellml` logger, so an application
configures them in one place:

```python
import logging

logging.getLogger("sbml2cellml").setLevel(logging.WARNING)
```

For scripts and interactive work the rich formatting of the package can be
enabled explicitly, which is what the examples do:

```python
from sbml2cellml import log

log.enable_rich_logging()
```

## function `enable_rich_logging(level: int = 20, console: rich.console.Console | None = None) -> logging.Logger`

Log the messages of the package on a rich console.

This configures logging and is meant for scripts, examples and interactive
work. Applications should configure logging themselves instead of calling
this. Calling it repeatedly replaces the handler instead of adding a second
one.

Args:
    level: level from which messages are logged
    console: console to log on, the console of the package by default

Returns:
    The `sbml2cellml` logger.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/testsuite.cases.md -->

# sbml2cellml.testsuite.cases

The semantic test cases of the SBML test suite.

A case is a directory `NNNNN` with the model in several SBML levels and
versions, `NNNNN-settings.txt` (simulation settings and tolerances),
`NNNNN-results.csv` (expected timecourse) and `NNNNN-model.m` (tags and the
test type). The suite is downloaded from its GitHub release into a cache on
first use.

## class `Case(id: str, case_dir: pathlib.Path, sbml_path: pathlib.Path | None, settings: sbml2cellml.testsuite.cases.Settings, expected: pandas.DataFrame | None, test_tags: tuple[str, ...], component_tags: tuple[str, ...], test_type: str, name: str = '') -> None`

One semantic test case.

`expected` is `None` for a case without expected results (e.g. a model
from a model repository): the roadrunner simulation of the original model
becomes the expected results for the later stages. `name` is a display name (e.g. the model
name), empty for the SBML test suite cases.

## class `Settings(start: float, duration: float, steps: int, variables: tuple[str, ...], absolute: float, relative: float, amount: frozenset[str], concentration: frozenset[str]) -> None`

Simulation settings of a case (`NNNNN-settings.txt`).

## class `TestSuiteError`

The test suite cannot be obtained or a case cannot be read.

## function `cache_dir() -> pathlib.Path`

Root of the cache, `SBML2CELLML_CACHE` or `~/.cache/sbml2cellml`.

## function `ensure_suite(version: str = '3.5.0', cache: pathlib.Path | None = None) -> pathlib.Path`

Directory of the semantic cases, downloaded and unpacked on first use.

Args:
    version: release of the test suite.
    cache: cache root, `cache_dir()` by default.

Returns:
    The `semantic/` directory with one subdirectory per case.

Raises:
    TestSuiteError: if the download fails or the archive has not the
        expected layout.

## function `load_case(case_dir: pathlib.Path) -> sbml2cellml.testsuite.cases.Case`

Read a case directory.

Args:
    case_dir: directory `NNNNN`.

Returns:
    The case; `sbml_path` is `None` when there is no L3V2 file.

Raises:
    TestSuiteError: if the settings, results or model file is missing.

## function `load_cases(root: pathlib.Path, ids: list[str] | None = None) -> list[sbml2cellml.testsuite.cases.Case]`

Read the cases of a suite directory.

Args:
    root: the `semantic/` directory.
    ids: case ids to read, all when `None`.

Returns:
    The cases sorted by id.

## function `parse_model_info(text: str) -> dict[str, list[str]]`

Parse the `key: values` lines of a `NNNNN-model.m` file.

A model file opens with a comment marker on its own line, a blank line,
the header block of `key: value` pairs, a blank line and then the prose
description (a few files carry an extra "Previous version of this
file:" comment line before the marker, or wrap a value like `synopsis`
onto its own blank-line-separated continuation). Only the header block
is parsed: the paragraphs (blocks separated by a blank line) up to and
including the first genuine `key: value` paragraph, plus at most one
further blank-line gap, so a wrapped value does not cut the header
short but prose describing the model later in the file (typically
several paragraphs further, e.g. a "Note:" line) is not mistaken for
more of it.

Args:
    text: content of the file.

Returns:
    The values per key, e.g. `testTags`, `componentTags`, `testType`.

## function `parse_settings(text: str) -> sbml2cellml.testsuite.cases.Settings`

Parse a settings file.

Cases of a test type other than `TimeCourse` (e.g. `FluxBalanceSteadyState`)
leave `start`, `duration` and `steps` empty; they parse to `0` and are never
used because `skip_reason` filters them out before a run.

Args:
    text: content of `NNNNN-settings.txt`.

Returns:
    The settings.

Raises:
    TestSuiteError: if `start`, `duration` or `steps` is missing.

## function `skip_reason(case: sbml2cellml.testsuite.cases.Case) -> str | None`

Why a case is not run, `None` if it is runnable.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/testsuite.compare.md -->

# sbml2cellml.testsuite.compare

Comparison of a simulation with the expected results of a case.

The SBML test suite accepts a value when
`|value - expected| <= absolute + relative * |expected|` at every time point,
with the tolerances of the case; the special values `inf`, `-inf` and `nan`
match only themselves. Species are expected either as amounts or
as concentrations (the `amount` and `concentration` lists of the settings);
a converted model carries every species in one quantity, so the columns are
converted with the compartment before the comparison.

## class `CompareError`

A result cannot be brought into the requested quantity.

## class `Comparison(variables: tuple[sbml2cellml.testsuite.compare.VariableComparison, ...], passed: bool, message: str) -> None`

Result of a case: every variable and the verdict.

## class `VariableComparison(variable: str, max_error: float, max_excess: float, passed: bool) -> None`

Result of one variable.

## function `compare(result: pandas.DataFrame, expected: pandas.DataFrame, settings: sbml2cellml.testsuite.cases.Settings) -> sbml2cellml.testsuite.compare.Comparison`

Compare a simulation with the expected results.

Args:
    result: timecourse with a `time` column and the settings variables.
    expected: expected timecourse of the case.
    settings: settings of the case (variables and tolerances).

Returns:
    The comparison; `passed` when every variable is within the tolerance
    at every time point.

## function `is_informative(expected: pandas.DataFrame, settings: sbml2cellml.testsuite.cases.Settings) -> bool`

Whether the expected results move more than the tolerance band.

A case whose expected frame is (numerically) constant for every variable
passes the comparison trivially no matter what the converters do; this
flags that so it can be told apart from a genuine check.

Args:
    expected: the expected frame, i.e. the case's expected results or,
        when there are none, the roadrunner simulation of the original model.
    settings: settings of the case (variables and tolerances).

Returns:
    True when at least one settings variable present in `expected` moves,
    between the minimum and maximum of its finite values, by more than
    `absolute + relative * max(|value|)`.

## function `requested_frame(df: pandas.DataFrame, quantities: dict[str, tuple[bool, str]], settings: sbml2cellml.testsuite.cases.Settings) -> pandas.DataFrame`

The settings variables in the quantity the case expects.

Args:
    df: timecourse of a converted model (every variable a column,
        including the compartments).
    quantities: result of `species_quantities`.
    settings: settings of the case.

Returns:
    `time` and the settings variables, species converted between amount
    and concentration with their compartment column when needed. A
    variable missing in `df` is left out (the comparison reports it).

Raises:
    CompareError: `df` has no time column or duplicate column names (e.g.
        a parameter with the id `time` next to roadrunner's time), or a
        variable needs converting between amount and concentration and
        its compartment column is missing from `df`.

## function `species_quantities(model: libsbml.Model) -> dict[str, tuple[bool, str]]`

Quantity of the species variables of a converted model.

Args:
    model: the original SBML model.

Returns:
    Species id to `(has only substance units, compartment id)`: the
    converted variable is an amount when the flag is set, else a
    concentration.

## function `strip_brackets(df: pandas.DataFrame) -> pandas.DataFrame`

Rename roadrunner's `[S]` concentration columns to `S`.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/testsuite.simulators.md -->

# sbml2cellml.testsuite.simulators

Simulator functions run inside a `SimulatorWorker`.

Every function imports its simulator lazily, so a worker process loads only
the simulator it is used for: roadrunner and libopencor bundle different LLVM
versions and crash once both have compiled in the same process. Results are
plain dictionaries (`columns`, `rows`) so they can be sent between processes.

## function `simulate_cellml(cellml_path: str, start: float, end: float, steps: int, relative_tolerance: float | None = None, absolute_tolerance: float | None = None, maximum_number_of_steps: int | None = None) -> dict[str, typing.Any]`

Uniform timecourse of a CellML model with libopencor.

Args:
    cellml_path: path of the CellML file.
    start: start time.
    end: end time.
    steps: number of intervals.
    relative_tolerance: relative tolerance of the ODE solver, the
        libopencor default when `None`.
    absolute_tolerance: absolute tolerance of the ODE solver, the
        libopencor default when `None`.
    maximum_number_of_steps: internal steps of the ODE solver between
        two time points, the default of `run_timecourse` when `None`.

Returns:
    `columns` (`time` first, then every variable) and `rows`.

## function `simulate_sbml(sbml: str, selections: list[str], start: float, end: float, steps: int, relative_tolerance: float | None = None, absolute_tolerance: float | None = None, maximum_number_of_steps: int | None = None) -> dict[str, typing.Any]`

Uniform timecourse of an SBML model with roadrunner.

Args:
    sbml: SBML document as string.
    selections: roadrunner selections after `time`, e.g. `S1`, `[S1]`.
    start: start time.
    end: end time.
    steps: number of intervals, the result has `steps + 1` rows.
    relative_tolerance: relative tolerance of the integrator, the
        roadrunner default when `None`.
    absolute_tolerance: absolute tolerance of the integrator, the
        roadrunner default when `None`.
    maximum_number_of_steps: internal steps of the integrator between
        two time points, the roadrunner default (20000) when `None`.

Returns:
    `columns` (the selections with `time` first) and `rows`.

## function `sleep(seconds: float) -> dict[str, typing.Any]`

Sleep, for the timeout tests of the worker.

Args:
    seconds: how long.

Returns:
    `slept` with the seconds.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/testsuite.worker.md -->

# sbml2cellml.testsuite.worker

Simulators in their own processes.

`SimulatorWorker` starts a process (spawn context, so nothing of the parent
is inherited) which runs the functions of `sbml2cellml.testsuite.simulators`
on request. Every call has a timeout; a worker which times out or dies is
replaced, so one bad case never takes the suite down.

Starting a process (spawn context) means importing
`sbml2cellml.testsuite.simulators` from scratch, which can take a while when
the machine is busy. To keep that startup cost out of the call timeout, the
worker process sends a `"ready"` handshake on its connection right before it
starts serving requests; `SimulatorWorker.start` waits for that handshake
with its own generous `STARTUP_TIMEOUT`, separate from the per-call timeout
used by `SimulatorWorker.call`.

## class `SimulationFailure`

The simulator raised or the worker died.

## class `SimulationTimeout`

The simulator did not answer within the timeout.

## class `SimulatorWorker(name: str, timeout: float = 60.0) -> None`

A simulator running in its own process.

### `SimulatorWorker.call(self, function: str, **kwargs: Any) -> dict[str, typing.Any]`

Run a function of `sbml2cellml.testsuite.simulators` in the worker.

Args:
    function: name of the function.
    **kwargs: its arguments, picklable.

Returns:
    The result dictionary of the function.

Raises:
    SimulationTimeout: if the call exceeds the timeout; the worker is
        replaced.
    SimulationFailure: if the function raised, does not exist, or
        the worker died; a dead worker is replaced.

### `SimulatorWorker.start(self) -> None`

Start the process and wait for its ready handshake.

Raises:
    SimulationFailure: if the process does not send the `"ready"`
        handshake within `STARTUP_TIMEOUT`; the process is killed.

### `SimulatorWorker.stop(self) -> None`

Stop the process.

## function `frame(result: dict[str, typing.Any]) -> pandas.DataFrame`

Data frame of a simulator result.

Args:
    result: `columns` and `rows` as returned by the simulator functions.

Returns:
    The rows as data frame.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/testsuite.runner.md -->

# sbml2cellml.testsuite.runner

The pipeline of the harness.

Every runnable case goes through five stages: the roadrunner simulation of
the original SBML, the conversion to CellML, the libopencor
simulation of the CellML, the conversion back to SBML and the roadrunner
simulation of the roundtrip SBML. Every simulation is compared with the
expected results of the case. The simulators run in worker processes, the
conversions in this process.

## function `roadrunner_selections(case: sbml2cellml.testsuite.cases.Case, model: libsbml.Model) -> list[str]`

Roadrunner selections of the settings variables of the original model.

A species expected as concentration is selected as `[id]`, everything
else by id.

## function `run_case(case: sbml2cellml.testsuite.cases.Case, work_dir: pathlib.Path, roadrunner: sbml2cellml.testsuite.worker.SimulatorWorker, libopencor: sbml2cellml.testsuite.worker.SimulatorWorker) -> sbml2cellml.testsuite.results.CaseResult`

Run the five stages of a case.

Args:
    case: a runnable case.
    work_dir: directory for the converted files.
    roadrunner: worker for the SBML simulations.
    libopencor: worker for the CellML simulation.

Returns:
    The stage results; a stage whose input stage failed is `skip`. Every
    stage is `fail` when the case itself cannot be set up (e.g. an
    unparsable SBML file). When `case.expected` is `None`, the
    `roadrunner` simulation of the original model becomes the expected
    results for `libopencor` and `roundtrip` when it succeeds; when it
    fails, those two stages are `skip` (`roadrunner failed`) instead of
    running, and `roadrunner` itself has no `max_excess` (there is
    nothing to compare it with). `CaseResult.informative` is
    `sbml2cellml.testsuite.compare.is_informative` of the expected frame
    (the case's expected results, or the `roadrunner` simulation once it
    is known), `None` when there is no expected frame, i.e.
    `case.expected` is `None` and the `roadrunner` stage failed.

## function `run_suite(cases: list[sbml2cellml.testsuite.cases.Case], work_dir: pathlib.Path, timeout: float = 60.0, progress: collections.abc.Callable[[str], None] | None = None) -> sbml2cellml.testsuite.results.SuiteResult`

Run the pipeline for every runnable case.

Args:
    cases: the cases; unrunnable ones are recorded as skipped.
    work_dir: directory for the converted files, created if needed.
    timeout: seconds per simulator call.
    progress: called with the finished status line of the case after
        every runnable case, e.g. `00001 roadrunner=pass sbml2cellml=pass
        libopencor=fail cellml2sbml=pass roundtrip=fail`.

Returns:
    The suite result.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/testsuite.results.md -->

# sbml2cellml.testsuite.results

Results of a suite run: per case and stage, JSON, regressions.

## class `CaseResult(id: str, test_tags: list[str], component_tags: list[str], stages: dict[str, sbml2cellml.testsuite.results.StageResult], name: str = '', informative: bool | None = None) -> None`

Outcome of one case.

## class `StageResult(status: str, message: str = '', max_excess: float | None = None) -> None`

Outcome of one stage of one case.

## class `SuiteResult(suite: str, version: str, cases: dict[str, sbml2cellml.testsuite.results.CaseResult] = <factory>, skipped: dict[str, str] = <factory>) -> None`

Outcome of a suite run.

### `SuiteResult.counts(self, stage: str) -> dict[str, int]`

Number of cases per status of a stage.

### `SuiteResult.to_json(self, path: pathlib.Path) -> None`

Write the result as JSON, sorted and indented (deterministic).

`max_excess` is rounded to 3 significant digits: its exact value is
an artifact of the solver and the machine it ran on, so keeping the
full precision would churn thousands of lines on every regeneration.

## function `improvements(old: sbml2cellml.testsuite.results.SuiteResult, new: sbml2cellml.testsuite.results.SuiteResult) -> list[str]`

Stages which did not pass before and pass now.

## function `regressions(old: sbml2cellml.testsuite.results.SuiteResult, new: sbml2cellml.testsuite.results.SuiteResult) -> list[str]`

Stages which passed before and do not pass now, and missing cases.

Args:
    old: committed result.
    new: current result.

Returns:
    One line per regression, e.g. `00001 roundtrip: pass -> fail (message)`.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/testsuite.report.md -->

# sbml2cellml.testsuite.report

Markdown report of a suite run, the page `docs/testsuite.md`.

## function `render_report(result: sbml2cellml.testsuite.results.SuiteResult, title: str = 'SBML test suite', intro: str = 'Semantic test cases of the [SBML test suite](https://github.com/sbmlteam/sbml-test-suite) {suite}. Every case is simulated with roadrunner (`roadrunner`), converted to CellML (`sbml2cellml`), simulated with libopencor (`libopencor`), converted back to SBML (`cellml2sbml`) and simulated with roadrunner again (`roundtrip`). See [Development](development.md#sbml-test-suite) for how to run it.\n\nEvery simulation is compared with the expected results of the case: a value passes when `|value - expected| <= absolute + relative * |expected|` with the absolute and the relative tolerance of the settings of the case. {solver}\n\nA `roadrunner` failure means roadrunner itself cannot simulate the case (algebraic rules, delays), it says nothing about the converters.', command: str = 'sbml2cellml-testsuite', names: bool = False, figure: str | None = None) -> str`

Render the report.

Args:
    result: a suite run.
    title: page title, the level-1 heading.
    intro: intro text right after the title; `{suite}` is replaced with
        `result.suite` and `{solver}` with `solver_text`.
    command: command named in the generated-by header.
    names: whether the cases table gets a `name` column.
    figure: path of the bar diagram relative to the report, shown in the
        summary together with its variant for dark backgrounds
        (`sbml2cellml.testsuite.figure`); no figure when `None`.

Returns:
    The markdown page.

## function `solver_text() -> str`

Sentences on the solver settings of the simulations of a report.

Returns:
    The tolerances and the number of internal steps of
    `sbml2cellml.testsuite.runner.SOLVER_SETTINGS`, so that the reports
    document the settings the simulations ran with.

## function `tolerance_text(value: float) -> str`

A tolerance as it is written in the documentation, e.g. `1e-9`.

Args:
    value: a tolerance.

Returns:
    The scientific notation without the zeros of the mantissa and the
    exponent, e.g. `1e-3` and `2.5e-4`.

## function `write_report(result: sbml2cellml.testsuite.results.SuiteResult, path: pathlib.Path, title: str = 'SBML test suite', intro: str = 'Semantic test cases of the [SBML test suite](https://github.com/sbmlteam/sbml-test-suite) {suite}. Every case is simulated with roadrunner (`roadrunner`), converted to CellML (`sbml2cellml`), simulated with libopencor (`libopencor`), converted back to SBML (`cellml2sbml`) and simulated with roadrunner again (`roundtrip`). See [Development](development.md#sbml-test-suite) for how to run it.\n\nEvery simulation is compared with the expected results of the case: a value passes when `|value - expected| <= absolute + relative * |expected|` with the absolute and the relative tolerance of the settings of the case. {solver}\n\nA `roadrunner` failure means roadrunner itself cannot simulate the case (algebraic rules, delays), it says nothing about the converters.', command: str = 'sbml2cellml-testsuite', names: bool = False, figure: str | None = None, figure_title: str | None = None, figure_cases: str = 'cases') -> None`

Write the report and, with `figure`, its bar diagram.

Args:
    result: a suite run.
    path: markdown file, overwritten.
    title: page title, the level-1 heading.
    intro: intro text right after the title; `{suite}` is replaced with
        `result.suite` and `{solver}` with `solver_text`.
    command: command named in the generated-by header.
    names: whether the cases table gets a `name` column.
    figure: path of the bar diagram relative to the report, written for
        light and dark backgrounds; no figure when `None`.
    figure_title: start of the title of the figure, the SBML test suite
        with its version when `None`.
    figure_cases: what a case is in the figure, e.g. `models`.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/testsuite.figure.md -->

# sbml2cellml.testsuite.figure

Bar diagram of a suite run, the figures `docs/images/testsuite*.svg`.

One horizontal bar per stage of the pipeline, stacked from the cases which
pass, fail and skip the stage, so the drop along the pipeline is visible at a
glance. The figure is written twice, for light and for dark backgrounds; both
are transparent, so they fit the documentation site as well as the README on
GitHub and PyPI.

## function `dark_path(path: P) -> P`

Path of the figure for dark backgrounds.

Args:
    path: path of the figure for light backgrounds.

Returns:
    The path with `_dark` added to the file name, `testsuite_dark.svg`
    for `testsuite.svg`.

## function `render_figure(result: sbml2cellml.testsuite.results.SuiteResult, title: str | None = None, dark: bool = False, cases: str = 'cases') -> matplotlib.figure.Figure`

Render the bar diagram.

Args:
    result: a suite run.
    title: start of the title, followed by the number of cases; the
        SBML test suite with its version when `None`.
    dark: whether the figure is for a dark background.
    cases: what a case is, in the title and on the axis, e.g. `models`.

Returns:
    The figure with a transparent background.

## function `write_figures(result: sbml2cellml.testsuite.results.SuiteResult, path: pathlib.Path, title: str | None = None, cases: str = 'cases') -> None`

Write the bar diagram for light and for dark backgrounds.

Args:
    result: a suite run.
    path: SVG file of the figure for light backgrounds, overwritten; the
        figure for dark backgrounds goes to `dark_path(path)`.
    title: start of the title of the figure, see `render_figure`.
    cases: what a case is, see `render_figure`.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/testsuite.cli.md -->

# sbml2cellml.testsuite.cli

The `sbml2cellml-testsuite` command.

    sbml2cellml-testsuite run [--cases 00001,00002] [--suite-dir DIR] [--work-dir DIR]
                              [--results FILE] [--report FILE] [--timeout SECONDS] [-v]
    sbml2cellml-testsuite report --results FILE --output FILE

`run` downloads the suite when no `--suite-dir` is given, runs the pipeline,
writes the results and the report. `report` renders a results file. Both write
the bar diagram of the report next to it (`images/testsuite.svg` and
`images/testsuite_dark.svg`, see `sbml2cellml.testsuite.figure`).

## function `build_parser() -> argparse.ArgumentParser`

Build the argument parser.

Returns:
    The parser with the `run` and `report` subcommands.

## function `main(argv: list[str] | None = None) -> int`

Run the command.

Args:
    argv: arguments without the program name, `sys.argv[1:]` by default.

Returns:
    0 on success, 1 on a missing suite or results file.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/biomodels.models.md -->

# sbml2cellml.biomodels.models

Access to the BioModels database: search, model info, download, selection.

The curated model set is queried and downloaded through the BioModels REST
API (`https://www.biomodels.org`, `www.ebi.ac.uk/biomodels` rejects the
quoted search query used here). Model info and the downloaded SBML are
cached on disk under `biomodels_cache()` so a rerun of the check never
re-fetches a model it already has.

## class `BioModelsError`

A BioModels request failed or returned an unexpected response.

## class `ModelInfo(id: str, name: str, publication_id: str, format_version: str, main_file: str) -> None`

Metadata of one BioModels model, from `/{id}?format=json`.

## class `Selection(date: str, query: str, models: tuple[str, ...]) -> None`

A snapshot of the curated model ids, e.g. `biomodels/models.json`.

## function `biomodels_cache(cache: pathlib.Path | None = None) -> pathlib.Path`

Cache directory of the BioModels info and downloads.

Args:
    cache: cache root, `sbml2cellml.testsuite.cases.cache_dir()` by
        default.

Returns:
    `<cache>/biomodels`.

## function `download_model(model_id: str, cache: pathlib.Path | None = None) -> pathlib.Path`

Download the main SBML file of a model, cached on disk.

Args:
    model_id: BioModels id, e.g. `BIOMD0000000001`.
    cache: cache root, `sbml2cellml.testsuite.cases.cache_dir()` by
        default.

Returns:
    Path of the cached SBML file.

Raises:
    BioModelsError: if the info or download request fails.

## function `load_selection(path: pathlib.Path) -> sbml2cellml.biomodels.models.Selection`

Read a selection file (e.g. `biomodels/models.json`).

Args:
    path: the selection file.

Returns:
    The selection.

## function `model_info(model_id: str, cache: pathlib.Path | None = None) -> sbml2cellml.biomodels.models.ModelInfo`

Metadata of a model, cached as `<cache>/biomodels/<id>/info.json`.

Args:
    model_id: BioModels id, e.g. `BIOMD0000000001`.
    cache: cache root, `sbml2cellml.testsuite.cases.cache_dir()` by
        default.

Returns:
    The model metadata.

Raises:
    BioModelsError: if the request fails or the response has no main
        SBML file.

## function `packages(sbml_path: pathlib.Path) -> tuple[str, ...]`

SBML packages an SBML file uses, not merely declares.

A package declared through the root element's `xmlns` counts only when
an element with its prefix actually occurs in the file, e.g. `<comp:...`
for a `comp` declaration. `comp` is the exception: its `port` elements
do not change the math, so it counts only when a `<comp:submodel`,
`<comp:modelDefinition` or `<comp:externalModelDefinition` element
occurs.

Args:
    sbml_path: SBML file to inspect.

Returns:
    The package names, sorted and without duplicates.

## function `query_curated_ids() -> list[str]`

Ids of every manually curated SBML model, paged through the search.

Returns:
    The model ids, sorted and without duplicates.

Raises:
    BioModelsError: if a search page cannot be fetched.

## function `write_selection(path: pathlib.Path, ids: list[str]) -> sbml2cellml.biomodels.models.Selection`

Write a selection file with today's date and the given ids.

Args:
    path: file to write.
    ids: model ids, written sorted and without duplicates.

Returns:
    The selection written.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/biomodels.cases.md -->

# sbml2cellml.biomodels.cases

Case construction for a BioModels model.

Every curated model runs the same generic timecourse: there are no expected
results (`Case.expected` is `None`, the roadrunner simulation of the
original SBML becomes the expected results the later stages are compared
with, see `sbml2cellml.testsuite.runner`).

## function `biomodel_case(info: sbml2cellml.biomodels.models.ModelInfo, sbml_path: pathlib.Path, packages: tuple[str, ...]) -> sbml2cellml.testsuite.cases.Case`

Build the generic timecourse case of a BioModels model.

Args:
    info: metadata of the model.
    sbml_path: path of the downloaded SBML file.
    packages: SBML packages the model uses (`models.packages`); each
        becomes a `<package>:package` component tag so `skip_reason`
        skips the case the same way it skips a test suite case using an
        unsupported package.

Returns:
    The case, with `expected=None` and `test_type="TimeCourse"`.
    `settings.variables` is the species ids, followed by the ids of the
    rate-rule and assignment-rule targets which are not species
    (parameters and compartments), in document order and without
    duplicates; `amount` and `concentration` stay species only.

Raises:
    BioModelsError: if the SBML file has no model.

## function `constructs(model: libsbml.Model, text: str) -> tuple[str, ...]`

SBML constructs a model uses, as component tags of a `Case`.

Args:
    model: the model to inspect.
    text: the file content the model was read from, used to detect a
        `csymbol` delay (not exposed on the `libsbml.Model` API).

Returns:
    The construct tags present in the model, e.g. `("Reactions",
    "AssignmentRules")`.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/biomodels.runner.md -->

# sbml2cellml.biomodels.runner

Runner producing a `SuiteResult` from a BioModels selection.

The pipeline itself (`sbml2cellml.testsuite.runner.run_suite`) is reused
unchanged; this module only turns a list of model ids into runnable cases,
skipping the ids whose info or download request fails, whose case cannot be
built or whose model has no variable (`prepare_cases`), and runs them
(`run_biomodels`).

## function `prepare_cases(ids: list[str], cache: pathlib.Path | None = None) -> tuple[list[sbml2cellml.testsuite.cases.Case], dict[str, str]]`

Build the runnable cases of a list of BioModels ids.

Args:
    ids: BioModels ids, e.g. `BIOMD0000000001`.
    cache: cache root, `sbml2cellml.testsuite.cases.cache_dir()` by
        default.

Returns:
    The cases built and a skip reason per id whose info or download
    request failed (`download failed: <ExceptionType>`), whose case
    could not be built (`case failed: <ExceptionType>`) or whose model
    has no variable (`no variables`); a case with SBML packages is still
    returned, `sbml2cellml.testsuite.cases.skip_reason` skips it later.

## function `run_biomodels(ids: list[str], cache: pathlib.Path | None = None, work_dir: pathlib.Path = PosixPath('biomodels/work'), timeout: float = 60.0, progress: collections.abc.Callable[[str], None] | None = None) -> sbml2cellml.testsuite.results.SuiteResult`

Run the pipeline for a list of BioModels ids.

Args:
    ids: BioModels ids to run.
    cache: cache root, `sbml2cellml.testsuite.cases.cache_dir()` by
        default.
    work_dir: directory for the converted files, created if needed.
    timeout: seconds per simulator call.
    progress: called with the finished status line of the case after
        every runnable case, see `sbml2cellml.testsuite.runner.run_suite`.

Returns:
    The suite result, `suite="biomodels"`.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/api/biomodels.cli.md -->

# sbml2cellml.biomodels.cli

The `sbml2cellml-biomodels` command.

    sbml2cellml-biomodels run [--models biomodels/models.json] [--ids ID,ID]
                              [--count N] [--work-dir biomodels/work]
                              [--results FILE] [--report FILE] [--timeout SECONDS] [-v]
    sbml2cellml-biomodels update [--models biomodels/models.json] [--count N]
    sbml2cellml-biomodels report --results FILE --output FILE

`run` runs the pipeline over `--ids` or, by default, the selection file,
writes the results and the report; it gives up without writing either when
too many ids failed to download (`DOWNLOAD_FAILURE_FRACTION`, e.g. a
BioModels outage) or when no case was left to run, and, when `--results`
already exists, prints its regressions and improvements against the new run.
`update` refreshes the selection file from the current BioModels search.
`report` renders a results file. `run` and `report` write the bar diagram of
the report next to it (`images/biomodels.svg` and `images/biomodels_dark.svg`).

The check is run locally, not in continuous integration: it downloads and
simulates more than a thousand models.

## function `build_parser() -> argparse.ArgumentParser`

Build the argument parser.

Returns:
    The parser with the `run`, `update` and `report` subcommands.

## function `main(argv: list[str] | None = None) -> int`

Run the command.

Args:
    argv: arguments without the program name, `sys.argv[1:]` by default.

Returns:
    0 on success, 1 on a missing selection or results file.

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/release-notes/index.md -->

# Release notes

The releases of `sbml2cellml`, newest first. Every release is available from [pypi](https://pypi.org/project/sbml2cellml/#history) and as [GitHub release](https://github.com/matthiaskoenig/sbml2cellml/releases).

| version | date | content |
| --- | --- | --- |
| [0.4.2](0.4.2.md) | 2026-09-28 | libopencor from PyPI in the `simulate` extra |
| [0.4.1](0.4.1.md) | 2026-09-19 | names, notes and annotations as RDF next to the CellML model and back, every reaction a variable of its rate |
| [0.4.0](0.4.0.md) | 2026-09-19 | amounts in changing compartments, formulas as ASTs, NaN initial assignments, roundtrip example, libsbml 5.21.2 |
| [0.3.5](0.3.5.md) | 2026-09-19 | complete errors and the tolerances in the reports of the SBML test suite and BioModels, stage `roadrunner` |
| [0.3.4](0.3.4.md) | 2026-09-19 | robust CVODE simulations: more solver steps, relaxed tolerances when the integrator fails |
| [0.3.3](0.3.3.md) | 2026-09-19 | BioModels results in the documentation, initial assignments of variables with a rate rule |
| [0.3.2](0.3.2.md) | 2026-09-19 | units in both directions, release notes in the documentation |
| [0.3.1](0.3.1.md) | 2026-09-19 | overview figure of the SBML test suite, algebraic rules, rateOf, conversion factors, documentation |
| [0.3.0](0.3.0.md) | 2026-09-19 | function definitions, initial assignments, local parameters, stoichiometries, time and avogadro, algebraic models |
| [0.2.0](0.2.0.md) | 2026-09-18 | libcellml 0.7 and python 3.14 |
| [0.1.0](0.1.0.md) | 2026-09-18 | first release: SBML to CellML, CellML to SBML, simulation, SBML test suite |

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/release-notes/0.4.2.md -->

# Release notes for sbml2cellml 0.4.2

libopencor is installed from PyPI with the `simulate` extra ([#54](https://github.com/matthiaskoenig/sbml2cellml/issues/54)).

## Changes
- the `simulate` extra contains libopencor, which now publishes its wheels on [PyPI](https://pypi.org/project/libopencor/) ([opencor/libopencor#595](https://github.com/opencor/libopencor/issues/595)): `pip install "sbml2cellml[simulate]"` installs the CellML simulator, and so do the `testsuite` and `dev` extras. The wheels of the GitHub release of libopencor and the uv index for them are no longer needed
- the error message of `sbml2cellml.simulate` without libopencor points at the `simulate` extra
- updated development dependencies; libcellml 0.7.1 is still the latest release

## Limitations
- the unit check of the libcellml 0.7.1 analyser warns about consistent equations with units which have a multiplier and an exponent, e.g., per minute ([cellml/libcellml#1463](https://github.com/cellml/libcellml/issues/1463)); the warnings do not make a model invalid
- events, the delay symbol and coupled algebraic rules are not converted
- Windows is not supported, the Windows wheels of libcellml 0.7.1 contain ARM64 binaries
- see the conversion issues in the documentation

Your sbml2cellml team

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/release-notes/0.4.1.md -->

# Release notes for sbml2cellml 0.4.1

The names, notes, SBO terms, annotations and the model history of an SBML model are converted: they go into an RDF file next to the CellML model and come back in the conversion to SBML ([#44](https://github.com/matthiaskoenig/sbml2cellml/issues/44)). Every reaction is a variable of its rate in the CellML model.

## Features
- `sbml2cellml` writes the metadata of the SBML model as `model.rdf` next to `model.cellml`. CellML 2.0 has no place for metadata in a model, only the `id` of an element for external metadata to point at, so the model, every variable and all units have an `id`, and `model.cellml#<id>` is the subject of an element in the RDF. The RDF is the one of SBML annotations (`bqbiol` and `bqmodel` qualifiers, the history with `dcterms` and vCard 4), written and parsed by libsbml, with the name as `dcterms:title`, the notes as `dcterms:description` (XHTML as XML literal) and the SBO term as the first `bqbiol:is`. See [Metadata](https://matthiaskoenig.github.io/sbml2cellml/conversion/#metadata)
- `cellml2sbml` reads the file back and sets name, notes, SBO term, CV terms and history on the parameters, the unit definitions and the model, so the metadata survives the roundtrip
- `metadata=False` of `convert_sbml2cellml` and `convert_cellml2sbml` and `--no-metadata` of both commands switch it off
- every reaction with a kinetic law is a variable `<reaction id> = kinetic law` of its rate, and the differential equation of a species is the sum of the rates of its reactions instead of the kinetic laws. Before, only a reaction whose id a formula uses had the variable. The simulation results are the same, the equations are readable, and a reaction has an element for its metadata
- the [roundtrip example](https://matthiaskoenig.github.io/sbml2cellml/roundtrip/) uses the complete BIOMD0000000012 with its notes and annotations and shows the RDF file and the metadata in the SBML model of the roundtrip
- new module `sbml2cellml.metadata`

## Changes
- the CellML of a model with reactions differs from the one of 0.4.0: the rate variables, and the `id` attributes of the model, the variables and the units
- `sbml2cellml.cellml2sbml.build_document` takes the metadata records as optional third argument

## Fixes
- a stoichiometry which is not set is 1 in SBML level 1 and 2; the warning that 1.0 is used appears only for level 3 models, where the value is unknown
- name of the glimepiride repository in the conversion page of the documentation

## Limitations
- the names, notes and annotations of rules, function definitions, initial assignments, constraints and events have no CellML element and are not converted, neither are annotations which are not RDF
- `rateOf` of a species in a compartment which an assignment or algebraic rule changes is not converted
- libsbml does not take a number other than 1 as true when it evaluates an initial assignment (`piecewise(0, 5, 1)`, case 01282 of the SBML test suite)
- the unit check of the libcellml 0.7.1 analyser warns about consistent equations with units which have a multiplier and an exponent, e.g., per minute ([cellml/libcellml#1463](https://github.com/cellml/libcellml/issues/1463)); the warnings do not make a model invalid
- libsbml evaluates the rate rule of a variable as its value ([sbmlteam/libsbml#491](https://github.com/sbmlteam/libsbml/issues/491)); the converter works around it since 0.3.3
- events, the delay symbol and coupled algebraic rules are not converted
- Windows is not supported, the Windows wheels of libcellml 0.7.1 contain ARM64 binaries
- see the conversion issues in the documentation

Your sbml2cellml team

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/release-notes/0.4.0.md -->

# Release notes for sbml2cellml 0.4.0

The conversion of SBML to CellML keeps the amount of a species when its compartment changes, handles formulas as the MathML trees of the model instead of text and sets initial assignments which are NaN. 34 more cases of the [SBML test suite](https://matthiaskoenig.github.io/sbml2cellml/testsuite/) and 15 more models of [BioModels](https://matthiaskoenig.github.io/sbml2cellml/biomodels/) simulate in libopencor as in roadrunner, and the documentation has a [roundtrip example](https://matthiaskoenig.github.io/sbml2cellml/roundtrip/).

## Features
- roundtrip example with the repressilator (BIOMD0000000012) in the documentation: the scripts, the SBML model, its CellML conversion and the SBML model of the roundtrip, and the simulations with roadrunner, libopencor and roadrunner side by side; `examples/repressilator_example.py`
- a species in concentration whose compartment changes in time gets a second variable `<species>_amount`, which the reactions change, and the equation `species = amount / compartment`: SBML keeps the amount when the size changes, also of a species without reactions and of a constant or boundary species. A compartment which an assignment rule of constants sets (a volume from a body weight) does not change, such models convert as before
- `rateOf` of a species in a changing compartment is converted when a rate rule changes the compartment
- the initial size of a compartment which an assignment rule sets is the value of the rule and not the size attribute
- an initial assignment which is NaN (`NaN`, `0 / 0`, a formula with a variable which is NaN) sets its variable to NaN; libsbml leaves such assignments, the converter tells them apart from the ones libsbml cannot evaluate, which stay unconverted with a warning
- new module `sbml2cellml.astnodes`, the construction of formulas as libsbml ASTs

## Changes
- the formulas of a model stay the ASTs libsbml reads, the reaction terms are built from nodes. The MathML of the converted models keeps the numbers and the nesting of the SBML model, so the CellML of a model may differ from the one of 0.3.5 in equivalent ways (`-(2 * r)` instead of `(-2) * r`)
- the helpers of `sbml2cellml.mathml` take an AST or, as before, a formula as text
- an initial assignment without math has no effect and is dropped without the warning that it was not converted
- `python-libsbml>=5.21.2`

## Fixes
- the dilution of a concentration by a growing compartment was missing, the concentration was the state and only the reaction terms were divided by the size (28 cases of the SBML test suite)
- an id which is a symbol of the formula syntax of libsbml (`avogadro`, `pi`, `NaN`, `true`) was converted as that symbol and not as the variable (cases 01761, 01763)
- operators with one argument in function definitions did not convert (cases 01490, 01491)
- a negative number and the negation of a product which starts with a negation are written such that the code libcellml generates compiles: libcellml 0.7.1 generates `--2.0*a` for `-((-2) * a)`, a decrement in C

## Limitations
- `rateOf` of a species in a compartment which an assignment or algebraic rule changes is not converted
- libsbml does not take a number other than 1 as true when it evaluates an initial assignment (`piecewise(0, 5, 1)`, case 01282)
- names, notes and annotations are not converted yet ([#44](https://github.com/matthiaskoenig/sbml2cellml/issues/44))
- the unit check of the libcellml 0.7.1 analyser warns about consistent equations with units which have a multiplier and an exponent, e.g., per minute ([cellml/libcellml#1463](https://github.com/cellml/libcellml/issues/1463)); the warnings do not make a model invalid
- libsbml evaluates the rate rule of a variable as its value ([sbmlteam/libsbml#491](https://github.com/sbmlteam/libsbml/issues/491)); the converter works around it since 0.3.3
- events, the delay symbol and coupled algebraic rules are not converted
- Windows is not supported, the Windows wheels of libcellml 0.7.1 contain ARM64 binaries
- see the conversion issues in the documentation

Your sbml2cellml team

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/release-notes/0.3.5.md -->

# Release notes for sbml2cellml 0.3.5

The reports of the [SBML test suite](https://matthiaskoenig.github.io/sbml2cellml/testsuite/) and of [BioModels](https://matthiaskoenig.github.io/sbml2cellml/biomodels/) show the complete error of every failing case and document the tolerances of the checks. The converters and their results are unchanged.

## Features
- the failure reasons of the reports list every failing case with its complete error: all issues of the validation of a CellML model, the code a compiler error of libopencor points at, every variable which exceeds the tolerance. Before, an error was one line cut at 400 characters, and the reports replaced quoted text by `'...'`, cut a reason at 160 characters and listed ten cases per reason
- the reports state how a simulation is compared, `|value - expected| <= absolute + relative * |expected|` with the tolerances of the settings of a case of the SBML test suite and with a relative tolerance of `1e-3` and an absolute tolerance of `1e-6` for BioModels, and the solver settings of the simulations (`1e-9` relative and `1e-12` absolute, relaxed only when CVODE fails, 100000 internal steps between two time points). The numbers are rendered from the settings in the code

## Changes
- the first stage of the checks, the roadrunner simulation of the original SBML model, is named `roadrunner` instead of `reference`, in the reports, the figures and the results files `testsuite/results.json` and `biomodels/results.json`; `reference_selections` of `sbml2cellml.testsuite.runner` is `roadrunner_selections`
- the message of a failed stage in the results files is the complete text of the exception with all its lines

## Fixes
- the development page gave the tolerances of the BioModels comparison as the tolerances of the SBML test suite, whose cases have their own
- a compiler error of libopencor was reported as a line of the generated code (BIOMD0000000162)

## Limitations
- the unit check of the libcellml 0.7.1 analyser warns about consistent equations with units which have a multiplier and an exponent, e.g., per minute ([cellml/libcellml#1463](https://github.com/cellml/libcellml/issues/1463)); the warnings do not make a model invalid
- libsbml evaluates the rate rule of a variable as its value ([sbmlteam/libsbml#491](https://github.com/sbmlteam/libsbml/issues/491)); the converter works around it since 0.3.3
- events, the delay symbol and coupled algebraic rules are not converted
- Windows is not supported, the Windows wheels of libcellml 0.7.1 contain ARM64 binaries
- see the conversion issues in the documentation

Your sbml2cellml team

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/release-notes/0.3.4.md -->

# Release notes for sbml2cellml 0.3.4

The simulations with CVODE are more robust. Of the 1060 manually curated models of BioModels which run, 908 simulate with libopencor like the roadrunner simulation of the original model (778 in 0.3.3), see the [BioModels](https://matthiaskoenig.github.io/sbml2cellml/biomodels/) page.

## Features
- `run_timecourse` takes `maximum_number_of_steps`, the number of internal steps the solver may take between two time points of the output, 100000 by default. The 500 steps of libopencor ended the simulation of many models with `mxstep steps taken before reaching tout`, e.g., of 147 curated models of BioModels
- the SBML test suite and BioModels checks repeat a simulation with relaxed tolerances (`1e-8` relative and `1e-10` absolute, then `1e-7` and `1e-9`) when CVODE gives up with the tight tolerances of the checks (`1e-9` and `1e-12`), for roadrunner and libopencor. Looser tolerances for every simulation are no alternative, results which pass would fail
- `tox r -e biomodels` runs the local BioModels check in the locked environment

## Changes
- the full SBML test suite runs with python 3.14 only, in continuous integration and in the tox environment `testsuite`; the unit tests run with every supported python

## Limitations
- the unit check of the libcellml 0.7.1 analyser warns about consistent equations with units which have a multiplier and an exponent, e.g., per minute ([cellml/libcellml#1463](https://github.com/cellml/libcellml/issues/1463)); the warnings do not make a model invalid
- libsbml evaluates the rate rule of a variable as its value ([sbmlteam/libsbml#491](https://github.com/sbmlteam/libsbml/issues/491)); the converter works around it since 0.3.3
- events, the delay symbol and coupled algebraic rules are not converted
- Windows is not supported, the Windows wheels of libcellml 0.7.1 contain ARM64 binaries
- see the conversion issues in the documentation

Your sbml2cellml team

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/release-notes/0.3.3.md -->

# Release notes for sbml2cellml 0.3.3

The manually curated models of BioModels are part of the documentation, and a wrong evaluation of initial assignments is fixed. Of the 1060 curated models which run, 1046 convert to valid CellML, 778 simulate with libopencor like the roadrunner simulation of the original model and 920 pass the roundtrip back to SBML, see the [BioModels](https://matthiaskoenig.github.io/sbml2cellml/biomodels/) page.

## Features
- the results of the BioModels check are the [BioModels](https://matthiaskoenig.github.io/sbml2cellml/biomodels/) page of the documentation, with a bar diagram of the models which pass, fail and skip every stage of the roundtrip, also in the README; `sbml2cellml-biomodels run` and `report` write the page and the diagram for light and dark backgrounds
- the modules of `sbml2cellml.biomodels` are part of the API reference, the check is described in the [development](https://matthiaskoenig.github.io/sbml2cellml/development/#biomodels) page

## Fixes
- SBML to CellML: a variable with an initial assignment and a rate rule got wrong initial values. libsbml evaluates such a variable by the math of its rate rule, so with `x = 5` at the start and `dx/dt = 3` an initial assignment `q = 2 * x` gave 6 instead of 10, and the conversion crashed when the rate depends on the variable, e.g., for BIOMD0000000429. The same happened for the algebraic rules solved at the start when a variable with a rate rule has no value. The rate rules are not part of the model anymore while libsbml evaluates the formulas

## Changes
- the BioModels check is run locally only: the `biomodels` workflow is removed, the report moved from `biomodels/report.md` to `docs/biomodels.md`

## Limitations
- the unit check of the libcellml 0.7.1 analyser warns about consistent equations with units which have a multiplier and an exponent, e.g., per minute ([cellml/libcellml#1463](https://github.com/cellml/libcellml/issues/1463)); the warnings do not make a model invalid
- events, the delay symbol and coupled algebraic rules are not converted
- Windows is not supported, the Windows wheels of libcellml 0.7.1 contain ARM64 binaries
- see the conversion issues in the documentation

Your sbml2cellml team

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/release-notes/0.3.2.md -->

# Release notes for sbml2cellml 0.3.2

Units are converted in both directions, and the release notes are part of the documentation. The glimepiride example models, which have a complete unit annotation and units on numbers, all convert to valid CellML and simulate with libopencor now.

## Features
- SBML to CellML: every unit definition becomes CellML units of the same name; the unit kinds `item` and `avogadro`, which CellML lacks, become new base units and dimensionless units
- SBML to CellML: the numbers in formulas keep their units, e.g., `2 mM`; they referenced units which did not exist in the CellML model before, which made a model invalid
- SBML to CellML: the variables get the units of their compartment, parameter, local parameter, species (substance per size of the compartment for a concentration) or reaction (extent per time) when the unit annotation of the model is complete, including the built-in units of SBML level 1 and 2. With a variable without units all variables stay `dimensionless`, a warning names the variables
- CellML to SBML: the units of the numbers are part of the SBML math
- CellML to SBML: new base units `item` become the SBML unit kind `item`
- the release notes are part of the documentation, see [Release notes](https://matthiaskoenig.github.io/sbml2cellml/release-notes/)

## Fixes
- CellML to SBML: the multiplier of a unit with an exponent was copied, but CellML applies the exponent to the prefix only, SBML to the multiplier as well: `1/60 second^-1` (per minute) became 60 per second. The SBML multiplier is `multiplier^(1/exponent)` now, and the prefix of a reference to custom units is raised to the exponent
- CellML to SBML: a factor which cannot be folded into a unit, e.g., of a unit with the exponent 0, becomes a dimensionless unit instead of an error
- the units `per_second`, which no variable used, are no longer added to every CellML model

## Changes
- the release notes moved from `release-notes/` to `docs/release-notes/`

## Limitations
- the unit check of the libcellml 0.7.1 analyser warns about consistent equations with units which have a multiplier and an exponent, e.g., per minute ([cellml/libcellml#1463](https://github.com/cellml/libcellml/issues/1463)); the warnings do not make a model invalid
- events, the delay symbol and coupled algebraic rules are not converted
- Windows is not supported, the Windows wheels of libcellml 0.7.1 contain ARM64 binaries
- see the conversion issues in the documentation

Your sbml2cellml team

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/release-notes/0.3.1.md -->

# Release notes for sbml2cellml 0.3.1

Documentation release with a graphical overview of the SBML test suite results, together with the conversions added since 0.3.0. Of the 1535 runnable cases of the SBML test suite, 1462 convert to valid CellML (1420 in 0.3.0) and 1010 simulate with libopencor like the expected results (857 in 0.3.0), see the [SBML test suite](https://matthiaskoenig.github.io/sbml2cellml/testsuite/) page.

## Features
- bar diagram of the SBML test suite results, i.e., the cases which pass, fail and skip every stage of the roundtrip, in the README and on the SBML test suite page; `sbml2cellml-testsuite run` and `report` write it for light and dark backgrounds (`sbml2cellml.testsuite.figure`)
- the tables of the SBML test suite report list the total number of cases, the failure reasons of a stage start with its number of failed cases
- algebraic rules are converted in both directions: an SBML algebraic rule becomes an implicit CellML equation, an implicit CellML equation an SBML algebraic rule
- the rateOf symbol is replaced by the right-hand side of the differential equation of its variable
- the conversion factors of species and the model are applied to the reaction terms
- `plus`, `times`, `and`, `or` and `xor` with less than two arguments are replaced by their value

## Fixes
- a rule or kinetic law without math no longer fails the conversion, it is ignored
- documentation: the headings of the conversion page were missing in the page navigation (the page had two top level headings), and pages outside of a section looked like members of the section above them; every page is part of a section now
- documentation: the PyPI badges use the current shields.io routes

## Changes
- documentation: the roadmap became the [conversion issues](https://matthiaskoenig.github.io/sbml2cellml/conversion-issues/) page, which only lists the remaining issues
- documentation: the simulation page covers the simulation of SBML with roadrunner and of CellML with libopencor with the setup of both optional simulators

## Limitations
- events, the delay symbol and coupled algebraic rules are not converted
- units are not converted, every variable is dimensionless; numbers with the units of an SBML unit definition are not supported
- Windows is not supported, the Windows wheels of libcellml 0.7.1 contain ARM64 binaries
- see the conversion issues in the documentation

Your sbml2cellml team

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/release-notes/0.3.0.md -->

# Release notes for sbml2cellml 0.3.0

Much wider coverage of SBML in the conversion to CellML. Of the runnable cases of the SBML test suite, 1420 convert to valid CellML (458 in 0.2.0) and 857 simulate with libopencor like the expected results (137 in 0.2.0), see the [SBML test suite](https://matthiaskoenig.github.io/sbml2cellml/testsuite/) page.

## Features
- function definitions: their calls are replaced by the bodies of the functions
- initial assignments are evaluated to initial values (an assignment to NaN is not)
- local parameters of kinetic laws become variables `<reaction>_<parameter>`
- species reference ids (stoichiometries, which rules may set) and reaction ids (rates) in formulas become variables
- the time and avogadro symbols in formulas
- numbers without units in formulas are `dimensionless`, integers and rationals are written as real numbers
- models without differential equations are converted as algebraic models without the variable of integration `time`; `run_timecourse` returns their steady state values at every requested time point
- an infinite or NaN value of a variable which is not a state becomes an equation

## Fixes
- kinetic laws are multiplied with their stoichiometry, which was ignored
- reactions no longer change boundary species
- a local parameter takes precedence over a global parameter of the same id in its kinetic law
- the target of an assignment rule has no initial value, which the libcellml 0.7 analyser rejected as underconstrained (e.g., the glimepiride kidney model is valid again)
- an SBML value set to NaN is no longer replaced by `1.0` like an unset value
- `run_timecourse` raises a `SimulationError` when two result columns get the same name instead of silently replacing one of them
- a recursive function definition no longer crashes the conversion: libsbml (5.21) segfaults when it expands the function definitions or initial assignments of such a document, which is therefore checked first

## Limitations
- events, algebraic rules, the delay and rateOf symbols and species conversion factors are not converted
- units are not converted, every variable is dimensionless; numbers with the units of an SBML unit definition are not supported
- Windows is not supported, the Windows wheels of libcellml 0.7.1 contain ARM64 binaries
- see the roadmap in the documentation

Your sbml2cellml team

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/release-notes/0.2.0.md -->

# Release notes for sbml2cellml 0.2.0

Port to libcellml 0.7 and support of python 3.14.

## Features
- python 3.14 is supported (3.13 and 3.14 are tested on Linux and macOS)

## Fixes
- `cellml2sbml` works with libcellml 0.7: sbml2cellml 0.1.0 declared `libcellml>=0.6.3`, so a new installation got libcellml 0.7.1, whose changed analyser API made `cellml2sbml` fail with `AttributeError: 'Analyser' object has no attribute 'model'`. The converted SBML is unchanged.

## Changes
- requires libcellml 0.7.1 or newer
- the libcellml 0.7 analyser reports an assignment rule target with an initial value as underconstrained, so the validation of `sbml2cellml` rejects such models now, e.g., the glimepiride kidney model; they failed later before (in the simulation or in `cellml2sbml`). See the roadmap in the documentation
- Windows is currently not supported: the Windows wheels of libcellml 0.7.1 contain ARM64 binaries, which do not load on x64 Windows ([cellml/libcellml#1460](https://github.com/cellml/libcellml/issues/1460))

Your sbml2cellml team

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/release-notes/0.1.0.md -->

# Release notes for sbml2cellml 0.1.0

First release of sbml2cellml, the conversion of SBML models to CellML 2.0.

## Features
- `convert_sbml2cellml` converts compartments, parameters, species, assignment and rate rules and reactions into a single CellML component and validates the result with libcellml
- `sbml2cellml.simulate` runs a timecourse of a CellML file with libopencor and returns a pandas data frame
- the `sbml2cellml` command line
- `convert_cellml2sbml` converts CellML 2.0 models (imports resolved, multiple components) to SBML L3V2 with parameters, rules, initial assignments, unit definitions and events for resets
- the `cellml2sbml` command line
- the `sbml2cellml-testsuite` command runs the [SBML test suite](https://github.com/sbmlteam/sbml-test-suite) through both converters and both simulators, results on the [SBML test suite](https://matthiaskoenig.github.io/sbml2cellml/testsuite/) page
- the `sbml2cellml-biomodels` command runs the manually curated models of [BioModels](https://www.biomodels.org) through both converters, results on the [BioModels](https://matthiaskoenig.github.io/sbml2cellml/biomodels/) page

## Limitations
- units are not converted, every variable is dimensionless
- events, initial assignments, function definitions and algebraic rules are not converted
- CellML to SBML: implicit (NLA) equations and external variables are not supported, units on numbers are dropped
- see the roadmap in the documentation

Your sbml2cellml team

---

<!-- https://matthiaskoenig.github.io/sbml2cellml/development.md -->

# Development

Contributions are welcome. The repository is [matthiaskoenig/sbml2cellml](https://github.com/matthiaskoenig/sbml2cellml); development happens against the `develop` branch via pull requests.

## Branch model

Two branches are permanent:

- **`develop`** is the default branch and the branch everything is integrated
  into. The documentation on
  [matthiaskoenig.github.io/sbml2cellml](https://matthiaskoenig.github.io/sbml2cellml)
  is published from it.
- **`main`** tracks the latest published release. It is fast-forwarded to the
  released commit by the `sync-main` job of the `CI-CD` workflow after the
  package went to pypi, so `main` and the newest version on pypi always agree.
  Nothing is developed on `main` and nothing is merged into it by hand.

Work happens on short lived branches off `develop`, which GitHub deletes after
the merge. Releases are tagged on `develop`, see [Release](#release).

## Pull requests

Neither branch accepts a direct push, every change goes through a pull request
against `develop`. This includes the maintainer, there is no bypass.

A pull request can only be merged once the four required checks are green:

| check   | workflow      | content                                                             |
| ------- | ------------- | --------------------------------------------------------------------|
| `tests` | `ci-cd.yml`   | the test matrix, linux and macos with python 3.13 and 3.14          |
| `ruff`  | `ruff.yml`    | `ruff check` and `ruff format --check`                              |
| `ty`    | `ty.yml`      | `tox r -e ty`                                                       |
| `docs`  | `docs.yml`    | the zensical build including the api reference and the agent files  |

`tests` aggregates the test matrix into a single job, so the name of the
required check stays the same when the matrix changes. On linux the CI
installs the python dev files before uv, because the roadrunner extension
links against libpython.

Further rules of a pull request:

- conversations have to be resolved before the merge
- an approval is dismissed when new commits are pushed
- the history stays linear, i.e., a pull request is merged with squash or
  rebase; merge commits are disabled
- the maintainer is the code owner of the repository (`.github/CODEOWNERS`) and
  is requested for review on every pull request. A pull request of a contributor
  is therefore reviewed and merged by the maintainer, who has the only write
  access. The rulesets themselves do not require an approval: on a personal
  repository a ruleset cannot ask for an approval only from somebody else, and
  requiring one would block the pull requests of the maintainer, who cannot
  approve their own. Once a second person has write access, a ruleset requiring
  an approving review of a code owner can be added

[Auto-merge](https://docs.github.com/pull-requests/collaborating-with-pull-requests/incorporating-changes-from-a-pull-request/automatically-merging-a-pull-request)
is enabled for the repository, so a pull request can be queued and is merged as
soon as the checks pass and the required approval is there.

### Repository policies { #repository-policies }

The protection is implemented with
[repository rulesets](https://docs.github.com/repositories/configuring-branches-and-merges-in-your-repository/managing-rulesets/about-rulesets).
They are part of the repository in `.github/rulesets/` instead of only living in
the web interface, so a change to a policy is reviewed like any other change:

| ruleset                 | applies to | rules                                                                                                                                       |
| ----------------------- | ---------- | ------------------------------------------------------------------------------------------------------------------------------------------- |
| `develop.json`          | `develop`  | pull request required, the four checks above, resolved conversations, linear history, no force push, no deletion. **No bypass, for anybody.** |
| `main.json`             | `main`     | linear history, no force push, no deletion, no bypass. The fast-forward of the release workflow needs none, only a force push or a merge commit would be rejected |
| `tags.json`             | all tags   | a tag cannot be deleted or moved, so a release tag keeps pointing at what was released                                                       |

Changing a policy means changing the json and applying it:

```bash
.github/rulesets/apply.sh
```

The script is idempotent: it updates the rulesets which exist and creates the
missing ones. It also sets the merge settings of the repository, i.e.,
auto-merge, delete branch on merge, and squash and rebase as the only merge
methods, and it allows `develop` to deploy to the `github-pages` environment:
enabling GitHub Pages creates that environment with a deployment policy for the
default branch of that moment only, which rejects the deployments of the
documentation workflow from `develop`. It needs the
[github cli](https://cli.github.com) authenticated as a user with admin
permission on the repository.

## Setup development environment

Development needs [uv](https://docs.astral.sh/uv/) and a checkout of the repository:

```bash
git clone https://github.com/matthiaskoenig/sbml2cellml.git
cd sbml2cellml
```

A single sync creates the virtual environment in `.venv`, installs `sbml2cellml` into it in editable mode and adds the complete tooling:

```bash
uv sync --extra dev
```

The `dev` extra contains everything used below, i.e., pytest, ruff, ty, tox, pre-commit, zensical and bump-my-version, together with the `simulate` extra (libopencor, pandas, matplotlib) and libroadrunner for the roundtrip tests. The python version is taken from `.python-version` (3.14, the newest supported version; 3.13 is supported as well).

The tools are then run either with `uv run <command>`, which uses the environment without activating it, or from the activated environment:

```bash
source .venv/bin/activate        # Linux and macOS
.venv\Scripts\activate           # Windows
```

The commands in this document are written without the `uv run` prefix; prepend it if the environment is not activated.

The last step installs the git hook:

```bash
uv run pre-commit install          # install the hook, once per checkout
uv run pre-commit run --all-files  # check the current state of the repository
```

From now on every commit is checked with ruff (lint and format) and ty, i.e., the same checks that run in continuous integration. On a commit only the changed files are looked at, `--all-files` checks the whole repository and is what a newly added hook should be tried with.

## Testing

The tests are written with pytest, tox runs them against the supported python versions.

The tox environments are `py3.13`, `py3.14` and `ty` (see `envlist` in `tox.ini`); a test environment is run with
```bash
tox r -e py3.14
```
and all environments, in parallel, with
```bash
tox run-parallel
```

The tox environments are created from `uv.lock` by tox-uv (`runner = uv-venv-lock-runner` in `tox.ini`).

This needs the interpreters to be available, which uv installs with `uv python install 3.13 3.14`. Continuous integration runs the same environments as `uvx --with tox-uv tox -e py3.13` and `-e py3.14`.

To run the tests directly against the development environment use

```bash
pytest                                                       # the full suite
pytest tests/test_cellml.py                                  # a single module
pytest tests/test_cellml.py::test_read_model                 # a single test
```

The simulation tests and the examples need libopencor and are skipped without it; with `uv sync --extra dev` it is installed.

The roundtrip tests (`tests/test_roundtrip.py`) need roadrunner and are skipped without it. roadrunner and libopencor bundle different LLVM versions and crash once both have JIT-compiled in one process, so roadrunner runs in a subprocess (`tests/simulators.py`); the same rule shapes the process model of the [SBML test suite](#sbml-test-suite) harness.

## Linting and formatting

Linting and formatting use [ruff](https://docs.astral.sh/ruff/):

```bash
ruff check     # lint
ruff format    # format
```

## Type checking

Type checking is performed with [ty](https://docs.astral.sh/ty/):

```bash
tox r -e ty
```
Or directly in the working tree:
```bash
uvx ty check
```

The configuration lives in `[tool.ty]` in `pyproject.toml`. Warnings are treated as errors, so the codebase is kept free of diagnostics. Suppress an unavoidable diagnostic with a rule specific `# ty: ignore[rule-name]` rather than a blanket comment.

## Documentation

The documentation is built with [Zensical](https://zensical.org/), the static site generator of the Material for MkDocs authors. The sources are markdown files in `docs/`, the site is configured in `zensical.toml` in the repository root. Nothing rendered is committed: the site is built by the `documentation` workflow on every push and published to [matthiaskoenig.github.io/sbml2cellml](https://matthiaskoenig.github.io/sbml2cellml) from the `develop` branch. The workflow builds with `--strict`, so a warning such as a broken link fails the `docs` check.

Build the site into `site/`:

```bash
uv run zensical build --clean
```

For writing, the preview rebuilds on save:

```bash
uv run zensical serve
```

The API reference is rendered from the docstrings by [mkdocstrings](https://mkdocstrings.github.io/); a page in `docs/api/` only contains the module directive:

```markdown
# cellml

::: sbml2cellml.cellml
```

Docstrings are therefore the place to document functions and classes, the markdown files provide the narrative around them. Adding a module to the reference means adding such a page and an entry to `nav` in `zensical.toml`.

### Files for agents { #files-for-agents }

Agents and language models read markdown, not rendered html. `scripts/llms_txt.py` writes the files of the [llms.txt convention](https://llmstxt.org/) into the built site, i.e., [llms.txt](https://matthiaskoenig.github.io/sbml2cellml/llms.txt) as an annotated index of all pages, [llms-full.txt](https://matthiaskoenig.github.io/sbml2cellml/llms-full.txt) with the complete documentation in a single file, and the markdown of every page next to its html (`/conversion-issues.md` for `/conversion-issues/`). The markdown of the API reference is generated from the docstrings with `inspect`, since the pages themselves only contain the mkdocstrings directive.

```bash
uv run zensical build --clean
uv run python scripts/llms_txt.py
```

The `documentation` workflow runs both steps, so the files are regenerated with every push. `docs/robots.txt` points crawlers at the sitemap and at these files. Zensical will provide agent context files itself at some point, then this script can go.

## Repository setup { #repository-setup }

The one-time setup of the GitHub repository, for the record:

1. `develop` is created from `main` and made the default branch: `gh repo edit matthiaskoenig/sbml2cellml --default-branch develop`
2. the GitHub Pages source is set to GitHub Actions: `gh api -X POST repos/matthiaskoenig/sbml2cellml/pages -f build_type=workflow`
3. the merge settings, the rulesets and the deployment branch of the documentation are applied: `.github/rulesets/apply.sh`
4. the PyPI trusted publisher is registered on [pypi.org](https://pypi.org/manage/account/publishing/) for the project `sbml2cellml`, owner `matthiaskoenig`, repository `sbml2cellml`, workflow `ci-cd.yml`, environment `pypi` (as a pending publisher before the first release)
5. the repository is enabled in the [Zenodo GitHub integration](https://zenodo.org/account/settings/github/), so that a GitHub release is archived with a DOI

## SBML test suite { #sbml-test-suite }

`sbml2cellml.testsuite` runs the [SBML test suite](https://github.com/sbmlteam/sbml-test-suite) through both converters and both simulators, so that every conversion gap is measured against a real corpus instead of a handful of examples. Each runnable case goes through five stages: the original SBML is simulated with roadrunner (`roadrunner`), converted to CellML (`sbml2cellml`), the CellML is simulated with libopencor (`libopencor`), converted back to SBML (`cellml2sbml`) and the roundtrip SBML is simulated again with roadrunner (`roundtrip`); every simulation is compared with the expected results of the case. A value passes when `|value - expected| <= absolute + relative * |expected|` at every time point, with the absolute and the relative tolerance of the settings of the case (`NNNNN-settings.txt`; the relative tolerance is `1e-4` for most cases, the absolute tolerance between `1e-9` and `0.15`). Cases with an SBML package the converters do not support, without a level 3 version 2 file or of a test type other than `TimeCourse` are skipped.

```bash
uv run sbml2cellml-testsuite run
```

downloads the suite into `~/.cache/sbml2cellml` on first use (`SBML2CELLML_CACHE` overrides the cache root), runs the pipeline and writes `testsuite/results.json`, `docs/testsuite.md` and its bar diagram `docs/images/testsuite.svg` (`testsuite_dark.svg` for dark backgrounds, also shown in `README.md`). `--cases 00001,00002` restricts the run to a subset of case ids and `--suite-dir` points at a local copy of the `semantic/` directory instead of downloading. The tolerances of the comparison are not the tolerances of the solver: every roadrunner and libopencor simulation integrates with tight solver tolerances (`1e-9` relative, `1e-12` absolute), so the comparison measures the conversion rather than the default integrator tolerances, an amendment to the original harness design. CVODE gives up on some models with tolerances this tight (`CV_TOO_MUCH_WORK`, `CV_CONV_FAILURE`, `CV_ERR_FAILURE`); only then the simulation is repeated with `1e-8`/`1e-10` and `1e-7`/`1e-9` (`SOLVER_SETTINGS` of `sbml2cellml.testsuite.runner`), and the failure with the tight tolerances is reported when the model integrates with none. Looser tolerances for every simulation are no alternative: with `1e-8`/`1e-10` 4 cases of the test suite and 22 stages of the BioModels check which pass would fail, with `1e-6`/`1e-8` 78 and 123. Both simulators may take 100000 internal steps between two time points; the 500 steps of libopencor ended the integration of 147 curated models of BioModels.

`testsuite/results.json`, `docs/testsuite.md` and the figures `docs/images/testsuite*.svg` are generated and committed. `tests/test_testsuite_full.py` (enabled with `SBML2CELLML_TESTSUITE=1`, run with `tox r -e testsuite` and in the linux CI job of python 3.14; the pipeline runs with python 3.14 only, the unit tests with every supported python) reruns the full suite and fails if any case regresses against the committed results or if the rendered report no longer matches `docs/testsuite.md`. The failure reasons of the report list every failing case with its complete error: the message of a stage in `testsuite/results.json` is the full text of the exception with all its lines, only absolute paths are reduced to the file name and the long decimals of a CVODE diagnostic rounded, so that the committed files do not depend on the machine. To accept an improvement, rerun `uv run sbml2cellml-testsuite run` and commit the updated `testsuite/results.json`, `docs/testsuite.md` and figures together in the same pull request. `uv run sbml2cellml-testsuite report` rerenders the report and the figures from the committed results, e.g., after a change of the report itself.

roadrunner and libopencor bundle different LLVM versions and crash once both have JIT-compiled in one process (see [Testing](#testing)); the harness therefore runs each simulator in its own worker process (`sbml2cellml.testsuite.worker`) for the whole run, instead of starting a subprocess per call.

## BioModels { #biomodels }

`sbml2cellml.biomodels` runs the manually curated SBML models of [BioModels](https://www.biomodels.org) (about 1075) through the pipeline of the SBML test suite, reusing `sbml2cellml.testsuite`, so the converters are measured against published models in addition to the test cases. These models have no expected results: the `roadrunner` stage simulates the original SBML with roadrunner over a generic timecourse (0 to 100 time units, 100 steps), and its result is what the `libopencor` and `roundtrip` simulations are compared with, using the comparison of the test suite with a relative tolerance of `1e-3` and an absolute tolerance of `1e-6` (`RELATIVE` and `ABSOLUTE` of `sbml2cellml.biomodels.cases`); the solver settings are the ones of the test suite (`1e-9`/`1e-12`, relaxed only when CVODE fails). A `roadrunner` failure means roadrunner cannot simulate the model, it says nothing about the converters; models with an SBML package or without a variable (no species and no target of a rate rule or assignment rule) are skipped.

```bash
uv run sbml2cellml-biomodels run
```

downloads every model into `~/.cache/sbml2cellml/biomodels` on first use (cached for later runs), runs the pipeline, prints the regressions and improvements against the committed results and writes `biomodels/results.json`, the page [BioModels](biomodels.md) (`docs/biomodels.md`) and its bar diagram `docs/images/biomodels.svg` (`biomodels_dark.svg` for dark backgrounds, also shown in `README.md`). `--ids BIOMD0000000001,BIOMD0000000012` and `--count N` restrict the run to a subset or the first N ids of the selection, for a quick check; give such a run its own `--results` and `--report`. `uv run sbml2cellml-biomodels report` rerenders the report and the figures from the results file.

The check is run locally and not in continuous integration: it takes about 20 minutes and depends on the BioModels web service. `tox r -e biomodels` runs it in the locked environment with python 3.14, the only python the pipeline runs with; arguments follow `--`, e.g., `tox r -e biomodels -- --count 10 --results /tmp/results.json --report /tmp/report.md`. The generated files are committed; rerun the check after changes of the converters, review the regressions and commit the regenerated files with the change.

`uv run sbml2cellml-biomodels update` refreshes the committed selection `biomodels/models.json` (the date, the search query and the sorted ids) from the current BioModels search; it is run occasionally, not with every check.

## Release

A release is made from `develop`. Since `develop` only accepts pull requests,
the release is prepared on a branch and tagged once that pull request is merged:

1. branch off `develop`: `git switch -c release/x.y.z develop`
2. write the release notes for the version in `docs/release-notes/x.y.z.md` and add the page to the `Release notes` section of `nav` in `zensical.toml` and to the overview `docs/release-notes/index.md`, newest first. The notes are part of the [documentation](release-notes/index.md) and the body of the GitHub release; `tests/test_package.py` fails when the current version has no notes or a page is missing in the navigation or the overview
3. make sure everything passes: `tox run-parallel`, `ruff check`, `tox r -e ty`
4. check the version bump: `uvx bump-my-version bump [major|minor|patch] --dry-run -vv`
5. bump the version: `uvx bump-my-version bump [major|minor|patch]`, which updates `src/sbml2cellml/__init__.py` and `CITATION.cff` and commits. It does not create the tag; a squash or rebase merge would rewrite the commit and leave the tag behind on a commit which is not part of `develop`
6. push the branch, open the pull request against `develop` and merge it once the checks are green
7. tag the merged commit on `develop` and push the tag:

    ```bash
    git switch develop
    git pull
    git tag x.y.z
    git push origin x.y.z
    ```

    This starts the `CI-CD` workflow, which runs the test matrix, publishes to
    [pypi](https://pypi.org/project/sbml2cellml/), creates the GitHub release
    from `docs/release-notes/x.y.z.md` and fast-forwards `main` to the tagged commit.
    Check the version before pushing, a tag cannot be moved or deleted
    afterwards.

8. test the installation from pypi in a fresh environment:

    ```bash
    uv venv --python 3.14
    uv pip install sbml2cellml
    ```

9. once Zenodo has archived the release, update the citation information, i.e., `date-released` in `CITATION.cff` and the version, date and version DOI of the release in the citation of `README.md` and `docs/index.md`. `bump-my-version` only updates the version, not the date and the DOI, which are only known after the release. These changes go in through a pull request like everything else