validator¶
Validation of SBGN documents against the SBGN XSD schema.
The packaged schema is the SBGN-ML 0.3 schema in libsbgnpy/schema/SBGN.xsd,
documents in the earlier namespaces are upconverted before they are validated,
i.e., the same documents are read and validated.
from pathlib import Path
from libsbgnpy import validate_xsd
errors = validate_xsd(Path("map.sbgn"))
if errors:
for error in errors:
print(error)
Validate an SBGN file against the SBGN XSD schema.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
f
|
Path
|
path of the SBGN file |
required |
Returns:
| Type | Description |
|---|---|
list[str]
|
The validation errors, empty if the document is valid. |
Raises:
| Type | Description |
|---|---|
OSError
|
if the file cannot be read |